RNA–Protein interactions for RNA: ENST00000506732.1

LDB2-208, Transcript of LIM domain binding 2, humanhuman

TSL 4

Gene LDB2, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-208ENST00000506732 RIMS1Q86UR5 1692 aaKnown RBP12.58□□□□□ -0.4
LDB2-208ENST00000506732 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
LDB2-208ENST00000506732 HFM1A2PYH4 1435 aa12.56□□□□□ -0.4
LDB2-208ENST00000506732 DEPDC5O75140 1603 aa12.56□□□□□ -0.4
LDB2-208ENST00000506732 ZC3H13Q5T200 1668 aaKnown RBP12.56□□□□□ -0.4
LDB2-208ENST00000506732 NAIPQ13075 1403 aa12.55□□□□□ -0.4
LDB2-208ENST00000506732 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
LDB2-208ENST00000506732 KDM5DQ9BY66 1539 aa12.55□□□□□ -0.4
LDB2-208ENST00000506732 KANK1Q14678 1352 aa12.55□□□□□ -0.4
LDB2-208ENST00000506732 CEP152O94986 1710 aa12.54□□□□□ -0.4
LDB2-208ENST00000506732 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
LDB2-208ENST00000506732 FAM135AQ9P2D6 1515 aa12.54□□□□□ -0.4
LDB2-208ENST00000506732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
LDB2-208ENST00000506732 UNC13BO14795 1591 aa12.54□□□□□ -0.4
LDB2-208ENST00000506732 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
LDB2-208ENST00000506732 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
LDB2-208ENST00000506732 MROH1Q8NDA8 1641 aa12.53□□□□□ -0.4
LDB2-208ENST00000506732 PPP6R1Q9UPN7 881 aa12.53□□□□□ -0.4
LDB2-208ENST00000506732 WASHC2CQ9Y4E1 1318 aa12.53□□□□□ -0.4
LDB2-208ENST00000506732 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
LDB2-208ENST00000506732 CAMSAP1Q5T5Y3 1602 aa12.51□□□□□ -0.41
LDB2-208ENST00000506732 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
LDB2-208ENST00000506732 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
LDB2-208ENST00000506732 ABCC3O15438 1527 aa12.5□□□□□ -0.41
LDB2-208ENST00000506732 C3P01024 1663 aa12.5□□□□□ -0.41
LDB2-208ENST00000506732 IQGAP3Q86VI3 1631 aa12.49□□□□□ -0.41
LDB2-208ENST00000506732 PTPRMP28827 1452 aa12.49□□□□□ -0.41
LDB2-208ENST00000506732 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
LDB2-208ENST00000506732 TET3O43151 1660 aa12.48□□□□□ -0.41
LDB2-208ENST00000506732 NUP155O75694 1391 aa12.47□□□□□ -0.41
LDB2-208ENST00000506732 ACIN1Q9UKV3 1341 aaKnown RBP12.47□□□□□ -0.41
LDB2-208ENST00000506732 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
LDB2-208ENST00000506732 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.41
LDB2-208ENST00000506732 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
LDB2-208ENST00000506732 EFCAB6Q5THR3 1501 aa12.45□□□□□ -0.42
LDB2-208ENST00000506732 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
LDB2-208ENST00000506732 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
LDB2-208ENST00000506732 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
LDB2-208ENST00000506732 PZPP20742 1482 aa12.43□□□□□ -0.42
LDB2-208ENST00000506732 CEBPAP49715 358 aaPredicted RBP12.43□□□□□ -0.42
LDB2-208ENST00000506732 E9PCH4 1651 aa12.42□□□□□ -0.42
LDB2-208ENST00000506732 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
LDB2-208ENST00000506732 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.42
LDB2-208ENST00000506732 NPATQ14207 1427 aa12.4□□□□□ -0.42
LDB2-208ENST00000506732 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
LDB2-208ENST00000506732 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.42
LDB2-208ENST00000506732 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
LDB2-208ENST00000506732 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
LDB2-208ENST00000506732 SETD1BQ9UPS6 1966 aaKnown RBP12.38□□□□□ -0.43
LDB2-208ENST00000506732 HRCP23327 699 aa12.38□□□□□ -0.43
LDB2-208ENST00000506732 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
LDB2-208ENST00000506732 SPATA31D1Q6ZQQ2 1576 aa12.38□□□□□ -0.43
LDB2-208ENST00000506732 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
LDB2-208ENST00000506732 TNRQ92752 1358 aa12.37□□□□□ -0.43
LDB2-208ENST00000506732 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
LDB2-208ENST00000506732 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
LDB2-208ENST00000506732 PKD2Q13563 968 aa12.35□□□□□ -0.43
LDB2-208ENST00000506732 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
LDB2-208ENST00000506732 SYNMO15061 1565 aa12.34□□□□□ -0.43
LDB2-208ENST00000506732 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
LDB2-208ENST00000506732 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
LDB2-208ENST00000506732 NOS1P29475 1434 aa12.32□□□□□ -0.44
LDB2-208ENST00000506732 TRPM2O94759 1503 aa12.32□□□□□ -0.44
LDB2-208ENST00000506732 PIK3C2BO00750 1634 aa12.31□□□□□ -0.44
LDB2-208ENST00000506732 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
LDB2-208ENST00000506732 KIF1BO60333 1816 aa12.31□□□□□ -0.44
LDB2-208ENST00000506732 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
LDB2-208ENST00000506732 FOXD1Q16676 465 aa12.3□□□□□ -0.44
LDB2-208ENST00000506732 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
LDB2-208ENST00000506732 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
LDB2-208ENST00000506732 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
LDB2-208ENST00000506732 LMTK3Q96Q04 1460 aa12.29□□□□□ -0.44
LDB2-208ENST00000506732 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
LDB2-208ENST00000506732 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
LDB2-208ENST00000506732 PTPRTO14522 1441 aa12.28□□□□□ -0.44
LDB2-208ENST00000506732 MYO5BQ9ULV0 1848 aa12.28□□□□□ -0.44
LDB2-208ENST00000506732 ADGRB3O60242 1522 aa12.28□□□□□ -0.44
LDB2-208ENST00000506732 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
LDB2-208ENST00000506732 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
LDB2-208ENST00000506732 IDI1Q13907 227 aa12.26□□□□□ -0.45
LDB2-208ENST00000506732 THEMISQ8N1K5 641 aaPredicted RBP12.25□□□□□ -0.45
LDB2-208ENST00000506732 TMEM131LA2VDJ0 1609 aa12.25□□□□□ -0.45
LDB2-208ENST00000506732 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
LDB2-208ENST00000506732 HSPA2P54652 639 aa12.24□□□□□ -0.45
LDB2-208ENST00000506732 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
LDB2-208ENST00000506732 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
LDB2-208ENST00000506732 ZNF326Q5BKZ1 582 aaKnown RBP12.22□□□□□ -0.45
LDB2-208ENST00000506732 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.45
LDB2-208ENST00000506732 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
LDB2-208ENST00000506732 SLIT1O75093 1534 aa12.2□□□□□ -0.46
LDB2-208ENST00000506732 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
LDB2-208ENST00000506732 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
LDB2-208ENST00000506732 STRCQ7RTU9 1775 aa12.18□□□□□ -0.46
LDB2-208ENST00000506732 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
LDB2-208ENST00000506732 ANKLE2Q86XL3 938 aa12.18□□□□□ -0.46
LDB2-208ENST00000506732 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
LDB2-208ENST00000506732 SCAF11Q99590 1463 aaKnown RBP12.17□□□□□ -0.46
LDB2-208ENST00000506732 ARHGAP23Q9P227 1491 aa12.17□□□□□ -0.46
LDB2-208ENST00000506732 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
LDB2-208ENST00000506732 RIMS2Q9UQ26 1411 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms