RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KDM4FA0A1W2PPD8 638 aa6.38□□□□□ -1.39
TRAPPC11-205ENST00000506426 TMC2Q8TDI7 906 aa6.38□□□□□ -1.39
TRAPPC11-205ENST00000506426 KCTD12Q96CX2 325 aaKnown RBP6.38□□□□□ -1.39
TRAPPC11-205ENST00000506426 DAXXQ9UER7 740 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC11-205ENST00000506426 DPYSL4O14531 572 aa6.37□□□□□ -1.39
TRAPPC11-205ENST00000506426 HRO43593 1189 aa6.37□□□□□ -1.39
TRAPPC11-205ENST00000506426 DSG2Q14126 1118 aa6.37□□□□□ -1.39
TRAPPC11-205ENST00000506426 EMILIN3Q9NT22 766 aa6.37□□□□□ -1.39
TRAPPC11-205ENST00000506426 FOXK1P85037 733 aa6.36□□□□□ -1.39
TRAPPC11-205ENST00000506426 PDIA6Q15084 440 aa6.36□□□□□ -1.39
TRAPPC11-205ENST00000506426 PTPN5P54829 565 aa6.33□□□□□ -1.4
TRAPPC11-205ENST00000506426 PLPP6Q8IY26 295 aa6.33□□□□□ -1.4
TRAPPC11-205ENST00000506426 ARXQ96QS3 562 aa6.32□□□□□ -1.4
TRAPPC11-205ENST00000506426 KCNK17Q96T54 332 aa6.32□□□□□ -1.4
TRAPPC11-205ENST00000506426 TK2O00142 265 aa6.31□□□□□ -1.4
TRAPPC11-205ENST00000506426 MAP3K9P80192 1104 aa6.31□□□□□ -1.4
TRAPPC11-205ENST00000506426 PTCD2Q8WV60 388 aaKnown RBP6.31□□□□□ -1.4
TRAPPC11-205ENST00000506426 TRIM66O15016 1216 aa6.3□□□□□ -1.4
TRAPPC11-205ENST00000506426 GPBP1L1Q9HC44 474 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-205ENST00000506426 GRXCR2A6NFK2 248 aa6.29□□□□□ -1.4
TRAPPC11-205ENST00000506426 PDE4DQ08499 809 aa6.29□□□□□ -1.4
TRAPPC11-205ENST00000506426 KDM4CQ9H3R0 1056 aa6.29□□□□□ -1.4
TRAPPC11-205ENST00000506426 IL27Q8NEV9 243 aa6.28□□□□□ -1.4
TRAPPC11-205ENST00000506426 VPS9D1Q9Y2B5 631 aa6.28□□□□□ -1.4
TRAPPC11-205ENST00000506426 MINK1Q8N4C8 1332 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-205ENST00000506426 NUTM2FA1L443 756 aa6.27□□□□□ -1.41
TRAPPC11-205ENST00000506426 PPP4R3BQ5MIZ7 849 aa6.27□□□□□ -1.41
TRAPPC11-205ENST00000506426 PSDA5PKW4 1024 aaPredicted RBP6.26□□□□□ -1.41
TRAPPC11-205ENST00000506426 GPR37O15354 613 aa6.26□□□□□ -1.41
TRAPPC11-205ENST00000506426 TBC1D12O60347 775 aa6.26□□□□□ -1.41
TRAPPC11-205ENST00000506426 STAC3Q96MF2 364 aa6.26□□□□□ -1.41
TRAPPC11-205ENST00000506426 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAPPC11-205ENST00000506426 MAP2K5Q13163 448 aa6.24□□□□□ -1.41
TRAPPC11-205ENST00000506426 OXER1Q8TDS5 423 aa6.24□□□□□ -1.41
TRAPPC11-205ENST00000506426 IRF6O14896 467 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 GNPATO15228 680 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 FCHSD2O94868 740 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 OSBPP22059 807 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 HIC1Q14526 733 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 ZNF454Q8N9F8 522 aa6.23□□□□□ -1.41
TRAPPC11-205ENST00000506426 BHMG1C9JSJ3 638 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 SUPT5HO00267 1087 aaKnown RBP6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 THSD4Q6ZMP0 1018 aa6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 HOMEZQ8IX15 550 aa6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 DDX12PQ92771 950 aa6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 CCDC102AQ96A19 550 aa6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 DDRGK1Q96HY6 314 aa6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 IRX2Q9BZI1 471 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC11-205ENST00000506426 EVI5O60447 810 aa6.2□□□□□ -1.42
TRAPPC11-205ENST00000506426 AMHR2Q16671 573 aa6.2□□□□□ -1.42
TRAPPC11-205ENST00000506426 FAM117AQ9C073 453 aa6.2□□□□□ -1.42
TRAPPC11-205ENST00000506426 A0A0G2JS52 829 aa6.19□□□□□ -1.42
TRAPPC11-205ENST00000506426 WNT2BQ93097 391 aa6.19□□□□□ -1.42
TRAPPC11-205ENST00000506426 ZBED2Q9BTP6 218 aa6.18□□□□□ -1.42
TRAPPC11-205ENST00000506426 BCL2L12Q9HB09 334 aa6.18□□□□□ -1.42
TRAPPC11-205ENST00000506426 PTGDRQ13258 359 aa6.17□□□□□ -1.42
TRAPPC11-205ENST00000506426 PARP9Q8IXQ6 854 aa6.17□□□□□ -1.42
TRAPPC11-205ENST00000506426 ZMYND15Q9H091 742 aa6.17□□□□□ -1.42
TRAPPC11-205ENST00000506426 FECHP22830 423 aa6.16□□□□□ -1.42
TRAPPC11-205ENST00000506426 FOSBP53539 338 aa6.16□□□□□ -1.42
TRAPPC11-205ENST00000506426 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
TRAPPC11-205ENST00000506426 ADAM33Q9BZ11 813 aa6.16□□□□□ -1.42
TRAPPC11-205ENST00000506426 PLEKHG3A1L390 1219 aa6.15□□□□□ -1.42
TRAPPC11-205ENST00000506426 GOLGA8CPA6NN73 597 aa6.15□□□□□ -1.42
TRAPPC11-205ENST00000506426 TTLL12Q14166 644 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-205ENST00000506426 MRPL50Q8N5N7 158 aaKnown RBP6.15□□□□□ -1.42
TRAPPC11-205ENST00000506426 ANO8Q9HCE9 1232 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC11-205ENST00000506426 PTPREP23469 700 aa6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 PRIM1P49642 420 aaKnown RBP6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 IFFO2Q5TF58 517 aa6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 EPAS1Q99814 870 aa6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 SLC4A5Q9BY07 1137 aa6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 RSPH6AQ9H0K4 717 aa6.14□□□□□ -1.43
TRAPPC11-205ENST00000506426 PHF14O94880 888 aa6.13□□□□□ -1.43
TRAPPC11-205ENST00000506426 PROX2Q3B8N5 592 aa6.13□□□□□ -1.43
TRAPPC11-205ENST00000506426 GOPCQ9HD26 462 aa6.13□□□□□ -1.43
TRAPPC11-205ENST00000506426 BCAMP50895 628 aa6.12□□□□□ -1.43
TRAPPC11-205ENST00000506426 EN1Q05925 392 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC11-205ENST00000506426 MAP3K7O43318 606 aa6.11□□□□□ -1.43
TRAPPC11-205ENST00000506426 RGS20O76081 388 aa6.11□□□□□ -1.43
TRAPPC11-205ENST00000506426 COL9A1P20849 921 aa6.11□□□□□ -1.43
TRAPPC11-205ENST00000506426 FLIIQ13045 1269 aa6.11□□□□□ -1.43
TRAPPC11-205ENST00000506426 Q6ZNB5 142 aa6.11□□□□□ -1.43
TRAPPC11-205ENST00000506426 LCE2BO14633 110 aa6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 CLCN1P35523 988 aa6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 GIGYF2Q6Y7W6 1299 aaKnown RBP6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 ZDHHC16Q969W1 377 aa6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 PCMTD1Q96MG8 357 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 NPDC1Q9NQX5 325 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC11-205ENST00000506426 MS4A1P11836 297 aa6.09□□□□□ -1.43
TRAPPC11-205ENST00000506426 TYW1BQ6NUM6 668 aa6.09□□□□□ -1.43
TRAPPC11-205ENST00000506426 RBM33Q96EV2 1170 aaKnown RBP6.09□□□□□ -1.43
TRAPPC11-205ENST00000506426 JPH4Q96JJ6 628 aa6.09□□□□□ -1.43
TRAPPC11-205ENST00000506426 CDHR5Q9HBB8 845 aa6.09□□□□□ -1.43
TRAPPC11-205ENST00000506426 FBXW7Q969H0 707 aa6.08□□□□□ -1.44
TRAPPC11-205ENST00000506426 PCDHGA10Q9Y5H3 936 aa6.08□□□□□ -1.44
TRAPPC11-205ENST00000506426 REPIN1Q9BWE0 567 aaKnown RBP6.07□□□□□ -1.44
TRAPPC11-205ENST00000506426 NBPF3Q9H094 633 aa6.07□□□□□ -1.44
TRAPPC11-205ENST00000506426 GPCPD1Q9NPB8 672 aa6.07□□□□□ -1.44
TRAPPC11-205ENST00000506426 WBP1LQ9NX94 342 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms