RNA–Protein interactions for RNA: ENST00000506147.5

MATR3-235, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-235ENST00000506147 YEATS2Q9ULM3 1422 aa23.59■■□□□ 1.37
MATR3-235ENST00000506147 ATP10AO60312 1499 aa23.58■■□□□ 1.37
MATR3-235ENST00000506147 ABCA6Q8N139 1617 aa23.58■■□□□ 1.36
MATR3-235ENST00000506147 REREQ9P2R6 1566 aa23.57■■□□□ 1.36
MATR3-235ENST00000506147 ARHGEF40Q8TER5 1519 aa23.55■■□□□ 1.36
MATR3-235ENST00000506147 EIF2AK4Q9P2K8 1649 aaKnown RBP23.55■■□□□ 1.36
MATR3-235ENST00000506147 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
MATR3-235ENST00000506147 MADDQ8WXG6 1647 aa23.52■■□□□ 1.36
MATR3-235ENST00000506147 AGLP35573 1532 aa23.49■■□□□ 1.35
MATR3-235ENST00000506147 SPATA31D1Q6ZQQ2 1576 aa23.48■■□□□ 1.35
MATR3-235ENST00000506147 HSPA2P54652 639 aa23.47■■□□□ 1.35
MATR3-235ENST00000506147 KIF3BO15066 747 aa23.46■■□□□ 1.35
MATR3-235ENST00000506147 UNC13BO14795 1591 aa23.45■■□□□ 1.34
MATR3-235ENST00000506147 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
MATR3-235ENST00000506147 DEPDC5O75140 1603 aa23.44■■□□□ 1.34
MATR3-235ENST00000506147 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
MATR3-235ENST00000506147 RNF17Q9BXT8 1623 aaKnown RBP23.43■■□□□ 1.34
MATR3-235ENST00000506147 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
MATR3-235ENST00000506147 NUP155O75694 1391 aa23.41■■□□□ 1.34
MATR3-235ENST00000506147 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
MATR3-235ENST00000506147 PRDM15P57071 1507 aaPredicted RBP23.4■■□□□ 1.34
MATR3-235ENST00000506147 KANK1Q14678 1352 aa23.4■■□□□ 1.34
MATR3-235ENST00000506147 DHX57Q6P158 1386 aaKnown RBP23.39■■□□□ 1.33
MATR3-235ENST00000506147 VWDEQ8N2E2 1590 aa23.37■■□□□ 1.33
MATR3-235ENST00000506147 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
MATR3-235ENST00000506147 FAM135AQ9P2D6 1515 aa23.36■■□□□ 1.33
MATR3-235ENST00000506147 MROH1Q8NDA8 1641 aa23.36■■□□□ 1.33
MATR3-235ENST00000506147 PZPP20742 1482 aa23.36■■□□□ 1.33
MATR3-235ENST00000506147 ARID4BQ4LE39 1312 aaPredicted RBP23.35■■□□□ 1.33
MATR3-235ENST00000506147 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
MATR3-235ENST00000506147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.35■■□□□ 1.332e-8■■□□□ 11.4
MATR3-235ENST00000506147 GGT6Q6P531 493 aa23.34■■□□□ 1.33
MATR3-235ENST00000506147 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
MATR3-235ENST00000506147 LMTK2Q8IWU2 1503 aa23.33■■□□□ 1.32
MATR3-235ENST00000506147 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.32
MATR3-235ENST00000506147 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
MATR3-235ENST00000506147 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
MATR3-235ENST00000506147 WASHC2CQ9Y4E1 1318 aa23.28■■□□□ 1.32
MATR3-235ENST00000506147 ZC3H13Q5T200 1668 aaKnown RBP23.27■■□□□ 1.32
MATR3-235ENST00000506147 ABCC3O15438 1527 aa23.25■■□□□ 1.31
MATR3-235ENST00000506147 PKD2Q13563 968 aa23.24■■□□□ 1.31
MATR3-235ENST00000506147 TET3O43151 1660 aa23.24■■□□□ 1.31
MATR3-235ENST00000506147 PLPPR3Q6T4P5 718 aa23.23■■□□□ 1.31
MATR3-235ENST00000506147 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
MATR3-235ENST00000506147 CNTLNQ9NXG0 1405 aa23.22■■□□□ 1.31
MATR3-235ENST00000506147 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
MATR3-235ENST00000506147 EFCAB6Q5THR3 1501 aa23.2■■□□□ 1.3
MATR3-235ENST00000506147 MLECQ14165 292 aa23.2■■□□□ 1.3
MATR3-235ENST00000506147 ESF1Q9H501 851 aaKnown RBP23.2■■□□□ 1.3
MATR3-235ENST00000506147 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
MATR3-235ENST00000506147 CEP152O94986 1710 aa23.16■■□□□ 1.3
MATR3-235ENST00000506147 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
MATR3-235ENST00000506147 STRCQ7RTU9 1775 aa23.15■■□□□ 1.3
MATR3-235ENST00000506147 E9PCH4 1651 aa23.14■■□□□ 1.29
MATR3-235ENST00000506147 PTPRTO14522 1441 aa23.14■■□□□ 1.29
MATR3-235ENST00000506147 NPATQ14207 1427 aa23.14■■□□□ 1.29
MATR3-235ENST00000506147 FOXD1Q16676 465 aa23.12■■□□□ 1.29
MATR3-235ENST00000506147 MROH2AA6NES4 1674 aa23.11■■□□□ 1.29
MATR3-235ENST00000506147 CLTCQ00610 1675 aaKnown RBP23.11■■□□□ 1.29
MATR3-235ENST00000506147 PREX1Q8TCU6 1659 aa23.11■■□□□ 1.29
MATR3-235ENST00000506147 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
MATR3-235ENST00000506147 ZMYM3Q14202 1370 aa23.11■■□□□ 1.29
MATR3-235ENST00000506147 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
MATR3-235ENST00000506147 PLA2R1Q13018 1463 aa23.08■■□□□ 1.29
MATR3-235ENST00000506147 NOS1P29475 1434 aa23.07■■□□□ 1.28
MATR3-235ENST00000506147 TRPM2O94759 1503 aa23.06■■□□□ 1.28
MATR3-235ENST00000506147 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
MATR3-235ENST00000506147 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
MATR3-235ENST00000506147 CCDC144AA2RUR9 1427 aa23.04■■□□□ 1.28
MATR3-235ENST00000506147 SPHKAPQ2M3C7 1700 aa23.04■■□□□ 1.28
MATR3-235ENST00000506147 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
MATR3-235ENST00000506147 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
MATR3-235ENST00000506147 SLC52A1Q9NWF4 448 aa23.01■■□□□ 1.27
MATR3-235ENST00000506147 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
MATR3-235ENST00000506147 LTBP4Q8N2S1 1624 aa22.98■■□□□ 1.27
MATR3-235ENST00000506147 FBXO31Q5XUX0 539 aaPredicted RBP22.97■■□□□ 1.27
MATR3-235ENST00000506147 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
MATR3-235ENST00000506147 NEURL4Q96JN8 1562 aa22.96■■□□□ 1.27
MATR3-235ENST00000506147 C3P01024 1663 aa22.94■■□□□ 1.26
MATR3-235ENST00000506147 SYNMO15061 1565 aa22.94■■□□□ 1.26
MATR3-235ENST00000506147 SETD1BQ9UPS6 1966 aaKnown RBP22.94■■□□□ 1.26
MATR3-235ENST00000506147 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
MATR3-235ENST00000506147 CLTCL1P53675 1640 aa22.93■■□□□ 1.26
MATR3-235ENST00000506147 TNRQ92752 1358 aa22.92■■□□□ 1.26
MATR3-235ENST00000506147 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
MATR3-235ENST00000506147 CEBPAP49715 358 aaPredicted RBP22.91■■□□□ 1.26
MATR3-235ENST00000506147 IDI1Q13907 227 aa22.9■■□□□ 1.26
MATR3-235ENST00000506147 UHRF1BP1Q6BDS2 1440 aa22.9■■□□□ 1.26
MATR3-235ENST00000506147 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
MATR3-235ENST00000506147 SPATA31E1Q6ZUB1 1445 aa22.89■■□□□ 1.25
MATR3-235ENST00000506147 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
MATR3-235ENST00000506147 STAC3Q96MF2 364 aa22.87■■□□□ 1.25
MATR3-235ENST00000506147 UGGT1Q9NYU2 1555 aa22.87■■□□□ 1.25
MATR3-235ENST00000506147 ADGRB3O60242 1522 aa22.84■■□□□ 1.25
MATR3-235ENST00000506147 KIF1BO60333 1816 aa22.84■■□□□ 1.25
MATR3-235ENST00000506147 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
MATR3-235ENST00000506147 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
MATR3-235ENST00000506147 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
MATR3-235ENST00000506147 PPP1R15AO75807 674 aaPredicted RBP22.79■■□□□ 1.24
MATR3-235ENST00000506147 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms