RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 ZNF335Q9H4Z2 1342 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-221ENST00000505944 TOM1O60784 492 aa10.92□□□□□ -0.66
NR1I3-221ENST00000505944 A2MP01023 1474 aa10.92□□□□□ -0.66
NR1I3-221ENST00000505944 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
NR1I3-221ENST00000505944 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
NR1I3-221ENST00000505944 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.66
NR1I3-221ENST00000505944 ADGBQ8N7X0 1667 aa10.9□□□□□ -0.66
NR1I3-221ENST00000505944 A2ML1A8K2U0 1454 aa10.9□□□□□ -0.66
NR1I3-221ENST00000505944 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-221ENST00000505944 MED1Q15648 1581 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-221ENST00000505944 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-221ENST00000505944 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-221ENST00000505944 RTEL1-TNFRSF6BF6WH68 1400 aa10.86□□□□□ -0.67
NR1I3-221ENST00000505944 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
NR1I3-221ENST00000505944 DNMT1P26358 1616 aaKnown RBP10.86□□□□□ -0.67
NR1I3-221ENST00000505944 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
NR1I3-221ENST00000505944 HNRNPMP52272 730 aaKnown RBP eCLIP10.85□□□□□ -0.67
NR1I3-221ENST00000505944 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-221ENST00000505944 GGT6Q6P531 493 aa10.85□□□□□ -0.67
NR1I3-221ENST00000505944 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
NR1I3-221ENST00000505944 HSPA1LP34931 641 aa10.84□□□□□ -0.67
NR1I3-221ENST00000505944 THEMISQ8N1K5 641 aaPredicted RBP10.84□□□□□ -0.67
NR1I3-221ENST00000505944 NLRP1Q9C000 1473 aa10.84□□□□□ -0.67
NR1I3-221ENST00000505944 TIAM1Q13009 1591 aa10.84□□□□□ -0.67
NR1I3-221ENST00000505944 TNRQ92752 1358 aa10.83□□□□□ -0.68
NR1I3-221ENST00000505944 RSPH4AQ5TD94 716 aa10.83□□□□□ -0.68
NR1I3-221ENST00000505944 ANKLE2Q86XL3 938 aa10.83□□□□□ -0.68
NR1I3-221ENST00000505944 EHBP1L1Q8N3D4 1523 aa10.83□□□□□ -0.68
NR1I3-221ENST00000505944 MED14O60244 1454 aa10.82□□□□□ -0.68
NR1I3-221ENST00000505944 PZPP20742 1482 aa10.82□□□□□ -0.68
NR1I3-221ENST00000505944 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
NR1I3-221ENST00000505944 DEPDC5O75140 1603 aa10.82□□□□□ -0.68
NR1I3-221ENST00000505944 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
NR1I3-221ENST00000505944 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
NR1I3-221ENST00000505944 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
NR1I3-221ENST00000505944 NEURL4Q96JN8 1562 aa10.8□□□□□ -0.68
NR1I3-221ENST00000505944 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
NR1I3-221ENST00000505944 SYNMO15061 1565 aa10.79□□□□□ -0.68
NR1I3-221ENST00000505944 VWDEQ8N2E2 1590 aa10.78□□□□□ -0.68
NR1I3-221ENST00000505944 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-221ENST00000505944 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
NR1I3-221ENST00000505944 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
NR1I3-221ENST00000505944 UGGT1Q9NYU2 1555 aa10.77□□□□□ -0.68
NR1I3-221ENST00000505944 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
NR1I3-221ENST00000505944 ZNF644Q9H582 1327 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-221ENST00000505944 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
NR1I3-221ENST00000505944 IQGAP1P46940 1657 aa10.76□□□□□ -0.69
NR1I3-221ENST00000505944 KIF3BO15066 747 aa10.75□□□□□ -0.69
NR1I3-221ENST00000505944 PPARGC1BQ86YN6 1023 aaKnown RBP10.75□□□□□ -0.69
NR1I3-221ENST00000505944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-221ENST00000505944 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
NR1I3-221ENST00000505944 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
NR1I3-221ENST00000505944 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
NR1I3-221ENST00000505944 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
NR1I3-221ENST00000505944 ARHGEF5Q12774 1597 aa10.73□□□□□ -0.69
NR1I3-221ENST00000505944 NCOA2Q15596 1464 aa10.73□□□□□ -0.69
NR1I3-221ENST00000505944 FBXO31Q5XUX0 539 aaPredicted RBP10.72□□□□□ -0.69
NR1I3-221ENST00000505944 LRRC7Q96NW7 1537 aa10.72□□□□□ -0.69
NR1I3-221ENST00000505944 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
NR1I3-221ENST00000505944 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
NR1I3-221ENST00000505944 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
NR1I3-221ENST00000505944 STRCP1A6NGW2 1772 aa10.7□□□□□ -0.7
NR1I3-221ENST00000505944 ZBTB22O15209 634 aa10.7□□□□□ -0.7
NR1I3-221ENST00000505944 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
NR1I3-221ENST00000505944 MAST1Q9Y2H9 1570 aa10.69□□□□□ -0.7
NR1I3-221ENST00000505944 SLC4A2P04920 1241 aa10.69□□□□□ -0.7
NR1I3-221ENST00000505944 CEP152O94986 1710 aa10.69□□□□□ -0.7
NR1I3-221ENST00000505944 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
NR1I3-221ENST00000505944 KANK4Q5T7N3 995 aaPredicted RBP10.68□□□□□ -0.7
NR1I3-221ENST00000505944 ABCC3O15438 1527 aa10.68□□□□□ -0.7
NR1I3-221ENST00000505944 FAM135BQ49AJ0 1406 aa10.67□□□□□ -0.7
NR1I3-221ENST00000505944 UBR1Q8IWV7 1749 aa10.67□□□□□ -0.7
NR1I3-221ENST00000505944 MROH1Q8NDA8 1641 aa10.67□□□□□ -0.7
NR1I3-221ENST00000505944 ERVK-7P63135 1459 aa10.67□□□□□ -0.7
NR1I3-221ENST00000505944 CFAP65Q6ZU64 1925 aaKnown RBP10.66□□□□□ -0.7
NR1I3-221ENST00000505944 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
NR1I3-221ENST00000505944 SLIT1O75093 1534 aa10.66□□□□□ -0.7
NR1I3-221ENST00000505944 LRRC9Q6ZRR7 1453 aa10.65□□□□□ -0.7
NR1I3-221ENST00000505944 ARHGAP23Q9P227 1491 aa10.65□□□□□ -0.7
NR1I3-221ENST00000505944 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
NR1I3-221ENST00000505944 KDM5AP29375 1690 aaKnown RBP10.63□□□□□ -0.71
NR1I3-221ENST00000505944 XIRP1Q702N8 1843 aaKnown RBP10.63□□□□□ -0.71
NR1I3-221ENST00000505944 TXNDC2Q86VQ3 553 aa10.62□□□□□ -0.71
NR1I3-221ENST00000505944 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
NR1I3-221ENST00000505944 CROCC2H7BZ55 1655 aa10.62□□□□□ -0.71
NR1I3-221ENST00000505944 APLP2Q06481 763 aa10.61□□□□□ -0.71
NR1I3-221ENST00000505944 RGS17Q9UGC6 210 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-221ENST00000505944 PRDM15P57071 1507 aaPredicted RBP10.61□□□□□ -0.71
NR1I3-221ENST00000505944 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
NR1I3-221ENST00000505944 NKTRP30414 1462 aaKnown RBP10.6□□□□□ -0.71
NR1I3-221ENST00000505944 PIK3C2BO00750 1634 aa10.59□□□□□ -0.71
NR1I3-221ENST00000505944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
NR1I3-221ENST00000505944 TMEM2Q9UHN6 1383 aa10.59□□□□□ -0.71
NR1I3-221ENST00000505944 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
NR1I3-221ENST00000505944 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
NR1I3-221ENST00000505944 KCNA6P17658 529 aa10.58□□□□□ -0.72
NR1I3-221ENST00000505944 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
NR1I3-221ENST00000505944 TMEM94Q12767 1356 aa10.57□□□□□ -0.72
NR1I3-221ENST00000505944 KANK1Q14678 1352 aa10.57□□□□□ -0.72
NR1I3-221ENST00000505944 LTKP29376 864 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms