RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 ANKRD50Q9ULJ7 1429 aa15.43■□□□□ 0.06
RFC1-210ENST00000505077 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
RFC1-210ENST00000505077 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
RFC1-210ENST00000505077 PRDM15P57071 1507 aaPredicted RBP15.43■□□□□ 0.06
RFC1-210ENST00000505077 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
RFC1-210ENST00000505077 DHX29Q7Z478 1369 aaKnown RBP15.42■□□□□ 0.06
RFC1-210ENST00000505077 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
RFC1-210ENST00000505077 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
RFC1-210ENST00000505077 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
RFC1-210ENST00000505077 FER1L4A9Z1Z3 1794 aa15.39■□□□□ 0.05
RFC1-210ENST00000505077 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
RFC1-210ENST00000505077 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
RFC1-210ENST00000505077 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
RFC1-210ENST00000505077 CEP152O94986 1710 aa15.37■□□□□ 0.05
RFC1-210ENST00000505077 VWDEQ8N2E2 1590 aa15.36■□□□□ 0.05
RFC1-210ENST00000505077 TET3O43151 1660 aa15.35■□□□□ 0.05
RFC1-210ENST00000505077 HRCP23327 699 aa15.34■□□□□ 0.05
RFC1-210ENST00000505077 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
RFC1-210ENST00000505077 CAMSAP1Q5T5Y3 1602 aa15.33■□□□□ 0.04
RFC1-210ENST00000505077 PCGF6Q9BYE7 350 aa15.33■□□□□ 0.04
RFC1-210ENST00000505077 ADAMTSL3P82987 1691 aa15.32■□□□□ 0.04
RFC1-210ENST00000505077 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
RFC1-210ENST00000505077 LMTK2Q8IWU2 1503 aa15.31■□□□□ 0.04
RFC1-210ENST00000505077 ABCC3O15438 1527 aa15.29■□□□□ 0.04
RFC1-210ENST00000505077 KANK1Q14678 1352 aa15.29■□□□□ 0.04
RFC1-210ENST00000505077 EFCAB6Q5THR3 1501 aa15.28■□□□□ 0.04
RFC1-210ENST00000505077 KIF3BO15066 747 aa15.28■□□□□ 0.04
RFC1-210ENST00000505077 FOXD1Q16676 465 aa15.28■□□□□ 0.04
RFC1-210ENST00000505077 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
RFC1-210ENST00000505077 CNTLNQ9NXG0 1405 aa15.27■□□□□ 0.04
RFC1-210ENST00000505077 E9PCH4 1651 aa15.27■□□□□ 0.03
RFC1-210ENST00000505077 SPHKAPQ2M3C7 1700 aa15.26■□□□□ 0.03
RFC1-210ENST00000505077 RIMS1Q86UR5 1692 aaKnown RBP15.25■□□□□ 0.03
RFC1-210ENST00000505077 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
RFC1-210ENST00000505077 PZPP20742 1482 aa15.25■□□□□ 0.03
RFC1-210ENST00000505077 RPRD2Q5VT52 1461 aaKnown RBP15.25■□□□□ 0.03
RFC1-210ENST00000505077 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
RFC1-210ENST00000505077 C3P01024 1663 aa15.25■□□□□ 0.03
RFC1-210ENST00000505077 NUP155O75694 1391 aa15.24■□□□□ 0.03
RFC1-210ENST00000505077 PREX1Q8TCU6 1659 aa15.23■□□□□ 0.03
RFC1-210ENST00000505077 ARHGAP31Q2M1Z3 1444 aa15.21■□□□□ 0.03
RFC1-210ENST00000505077 GGT6Q6P531 493 aa15.2■□□□□ 0.02
RFC1-210ENST00000505077 SETD1BQ9UPS6 1966 aaKnown RBP15.2■□□□□ 0.02
RFC1-210ENST00000505077 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
RFC1-210ENST00000505077 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
RFC1-210ENST00000505077 TRIM52Q96A61 297 aa15.18■□□□□ 0.02
RFC1-210ENST00000505077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.17■□□□□ 0.025e-6■■■■□ 19.5
RFC1-210ENST00000505077 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
RFC1-210ENST00000505077 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
RFC1-210ENST00000505077 TRPM2O94759 1503 aa15.16■□□□□ 0.02
RFC1-210ENST00000505077 KIF1BO60333 1816 aa15.15■□□□□ 0.02
RFC1-210ENST00000505077 MLECQ14165 292 aa15.15■□□□□ 0.02
RFC1-210ENST00000505077 NPATQ14207 1427 aa15.15■□□□□ 0.02
RFC1-210ENST00000505077 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
RFC1-210ENST00000505077 KDM5AP29375 1690 aaKnown RBP15.14■□□□□ 0.01
RFC1-210ENST00000505077 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
RFC1-210ENST00000505077 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
RFC1-210ENST00000505077 ERVK-7P63135 1459 aa15.12■□□□□ 0.01
RFC1-210ENST00000505077 ZNF142P52746 1687 aaPredicted RBP15.12■□□□□ 0.01
RFC1-210ENST00000505077 SYNMO15061 1565 aa15.11■□□□□ 0.01
RFC1-210ENST00000505077 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
RFC1-210ENST00000505077 MYO3AQ8NEV4 1616 aa15.1■□□□□ 0.01
RFC1-210ENST00000505077 PTPRTO14522 1441 aa15.1■□□□□ 0.01
RFC1-210ENST00000505077 PTPRMP28827 1452 aa15.1■□□□□ 0.01
RFC1-210ENST00000505077 NOS1P29475 1434 aa15.09■□□□□ 0.01
RFC1-210ENST00000505077 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
RFC1-210ENST00000505077 CLTCL1P53675 1640 aa15.09■□□□□ 0.01
RFC1-210ENST00000505077 NEURL4Q96JN8 1562 aa15.08■□□□□ 0
RFC1-210ENST00000505077 PKD2Q13563 968 aa15.08■□□□□ 0
RFC1-210ENST00000505077 MYO5BQ9ULV0 1848 aa15.08■□□□□ 0
RFC1-210ENST00000505077 NLRP1Q9C000 1473 aa15.05■□□□□ -0
RFC1-210ENST00000505077 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
RFC1-210ENST00000505077 PLA2R1Q13018 1463 aa15.04■□□□□ -0
RFC1-210ENST00000505077 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
RFC1-210ENST00000505077 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
RFC1-210ENST00000505077 ADGRB3O60242 1522 aa15.03■□□□□ -0
RFC1-210ENST00000505077 IFT172Q9UG01 1749 aa15.03■□□□□ -0
RFC1-210ENST00000505077 CEP170BQ9Y4F5 1589 aaPredicted RBP15.02■□□□□ -0
RFC1-210ENST00000505077 TNRQ92752 1358 aa15.02■□□□□ -0
RFC1-210ENST00000505077 TMEM131LA2VDJ0 1609 aa15.02□□□□□ -0.01
RFC1-210ENST00000505077 UGGT1Q9NYU2 1555 aa15.01□□□□□ -0.01
RFC1-210ENST00000505077 KDM4FA0A1W2PPD8 638 aa15□□□□□ -0.01
RFC1-210ENST00000505077 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
RFC1-210ENST00000505077 PPLO60437 1756 aa15□□□□□ -0.01
RFC1-210ENST00000505077 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
RFC1-210ENST00000505077 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
RFC1-210ENST00000505077 A2ML1A8K2U0 1454 aa14.98□□□□□ -0.01
RFC1-210ENST00000505077 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
RFC1-210ENST00000505077 FBXO31Q5XUX0 539 aaPredicted RBP14.96□□□□□ -0.01
RFC1-210ENST00000505077 UHRF1BP1Q6BDS2 1440 aa14.96□□□□□ -0.01
RFC1-210ENST00000505077 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
RFC1-210ENST00000505077 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
RFC1-210ENST00000505077 SLIT1O75093 1534 aa14.92□□□□□ -0.02
RFC1-210ENST00000505077 NEXMIFQ5QGS0 1516 aa14.91□□□□□ -0.02
RFC1-210ENST00000505077 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
RFC1-210ENST00000505077 LAMC1P11047 1609 aa14.89□□□□□ -0.03
RFC1-210ENST00000505077 IDI1Q13907 227 aa14.89□□□□□ -0.03
RFC1-210ENST00000505077 MYOM2P54296 1465 aa14.89□□□□□ -0.03
RFC1-210ENST00000505077 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
RFC1-210ENST00000505077 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms