RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 MROH2AA6NES4 1674 aa31.55■■■□□ 2.64
DDR1-255ENST00000504927 RRBP1Q9P2E9 1410 aaKnown RBP31.53■■■□□ 2.64
DDR1-255ENST00000504927 ZMYM3Q14202 1370 aa31.53■■■□□ 2.64
DDR1-255ENST00000504927 ADGRL2O95490 1459 aa31.52■■■□□ 2.64
DDR1-255ENST00000504927 PREX1Q8TCU6 1659 aa31.51■■■□□ 2.64
DDR1-255ENST00000504927 ERBINQ96RT1 1412 aa31.51■■■□□ 2.64
DDR1-255ENST00000504927 WASHC2CQ9Y4E1 1318 aa31.5■■■□□ 2.63
DDR1-255ENST00000504927 HSPA2P54652 639 aa31.48■■■□□ 2.63
DDR1-255ENST00000504927 EIF2AK4Q9P2K8 1649 aaKnown RBP31.48■■■□□ 2.63
DDR1-255ENST00000504927 FAM135AQ9P2D6 1515 aa31.47■■■□□ 2.63
DDR1-255ENST00000504927 PTPRKQ15262 1439 aa31.47■■■□□ 2.63
DDR1-255ENST00000504927 ROCK1Q13464 1354 aa31.46■■■□□ 2.63
DDR1-255ENST00000504927 ITGAEP38570 1179 aa31.46■■■□□ 2.63
DDR1-255ENST00000504927 RNF17Q9BXT8 1623 aaKnown RBP31.43■■■□□ 2.62
DDR1-255ENST00000504927 KDM5DQ9BY66 1539 aa31.4■■■□□ 2.62
DDR1-255ENST00000504927 SETD1BQ9UPS6 1966 aaKnown RBP31.4■■■□□ 2.62
DDR1-255ENST00000504927 NPATQ14207 1427 aa31.4■■■□□ 2.62
DDR1-255ENST00000504927 MROH1Q8NDA8 1641 aa31.39■■■□□ 2.62
DDR1-255ENST00000504927 UHRF1BP1Q6BDS2 1440 aa31.39■■■□□ 2.62
DDR1-255ENST00000504927 ANKRD50Q9ULJ7 1429 aa31.38■■■□□ 2.61
DDR1-255ENST00000504927 KANK1Q14678 1352 aa31.34■■■□□ 2.61
DDR1-255ENST00000504927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.34■■■□□ 2.61
DDR1-255ENST00000504927 ABCC3O15438 1527 aa31.3■■■□□ 2.6
DDR1-255ENST00000504927 MYO3AQ8NEV4 1616 aa31.3■■■□□ 2.6
DDR1-255ENST00000504927 PZPP20742 1482 aa31.28■■■□□ 2.6
DDR1-255ENST00000504927 PRDM15P57071 1507 aaPredicted RBP31.28■■■□□ 2.6
DDR1-255ENST00000504927 ZC3H13Q5T200 1668 aaKnown RBP31.26■■■□□ 2.6
DDR1-255ENST00000504927 CEP152O94986 1710 aa31.26■■■□□ 2.59
DDR1-255ENST00000504927 DEPDC5O75140 1603 aa31.25■■■□□ 2.59
DDR1-255ENST00000504927 FBXO31Q5XUX0 539 aaPredicted RBP31.25■■■□□ 2.59
DDR1-255ENST00000504927 STRCQ7RTU9 1775 aa31.23■■■□□ 2.59
DDR1-255ENST00000504927 ZNF142P52746 1687 aaPredicted RBP31.22■■■□□ 2.59
DDR1-255ENST00000504927 ARHGAP31Q2M1Z3 1444 aa31.2■■■□□ 2.59
DDR1-255ENST00000504927 CEP170BQ9Y4F5 1589 aaPredicted RBP31.2■■■□□ 2.58
DDR1-255ENST00000504927 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.58
DDR1-255ENST00000504927 TNRQ92752 1358 aa31.18■■■□□ 2.58
DDR1-255ENST00000504927 LMTK2Q8IWU2 1503 aa31.17■■■□□ 2.58
DDR1-255ENST00000504927 VWDEQ8N2E2 1590 aa31.17■■■□□ 2.58
DDR1-255ENST00000504927 NAIPQ13075 1403 aa31.12■■■□□ 2.57
DDR1-255ENST00000504927 SPATA31D1Q6ZQQ2 1576 aa31.1■■■□□ 2.57
DDR1-255ENST00000504927 A2ML1A8K2U0 1454 aa31.1■■■□□ 2.57
DDR1-255ENST00000504927 HFM1A2PYH4 1435 aa31.1■■■□□ 2.57
DDR1-255ENST00000504927 ERVK-7P63135 1459 aa31.09■■■□□ 2.57
DDR1-255ENST00000504927 NUP155O75694 1391 aa31.09■■■□□ 2.57
DDR1-255ENST00000504927 NLRP1Q9C000 1473 aa31.08■■■□□ 2.57
DDR1-255ENST00000504927 UNC13BO14795 1591 aa31.07■■■□□ 2.56
DDR1-255ENST00000504927 DMRT2Q9Y5R5 561 aa31.06■■■□□ 2.56
DDR1-255ENST00000504927 CFAP65Q6ZU64 1925 aaKnown RBP31.05■■■□□ 2.56
DDR1-255ENST00000504927 THEMISQ8N1K5 641 aaPredicted RBP31.02■■■□□ 2.56
DDR1-255ENST00000504927 RPRD2Q5VT52 1461 aaKnown RBP31.01■■■□□ 2.56
DDR1-255ENST00000504927 EFCAB6Q5THR3 1501 aa31.01■■■□□ 2.55
DDR1-255ENST00000504927 PLA2R1Q13018 1463 aa31.01■■■□□ 2.55
DDR1-255ENST00000504927 NCKAP5LQ9HCH0 1330 aa30.98■■■□□ 2.55
DDR1-255ENST00000504927 GCC2Q8IWJ2 1684 aa30.97■■■□□ 2.55
DDR1-255ENST00000504927 PKD2Q13563 968 aa30.97■■■□□ 2.55
DDR1-255ENST00000504927 PTPRTO14522 1441 aa30.97■■■□□ 2.55
DDR1-255ENST00000504927 TET3O43151 1660 aa30.97■■■□□ 2.55
DDR1-255ENST00000504927 IQGAP3Q86VI3 1631 aa30.96■■■□□ 2.55
DDR1-255ENST00000504927 SLC52A1Q9NWF4 448 aa30.95■■■□□ 2.55
DDR1-255ENST00000504927 NOS1P29475 1434 aa30.95■■■□□ 2.54
DDR1-255ENST00000504927 UGGT1Q9NYU2 1555 aa30.95■■■□□ 2.54
DDR1-255ENST00000504927 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
DDR1-255ENST00000504927 TRIM52Q96A61 297 aa30.94■■■□□ 2.54
DDR1-255ENST00000504927 IDI1Q13907 227 aa30.91■■■□□ 2.54
DDR1-255ENST00000504927 SYNMO15061 1565 aa30.89■■■□□ 2.54
DDR1-255ENST00000504927 ANKLE2Q86XL3 938 aa30.89■■■□□ 2.54
DDR1-255ENST00000504927 NEURL4Q96JN8 1562 aa30.88■■■□□ 2.53
DDR1-255ENST00000504927 POLR1AO95602 1720 aaPredicted RBP30.88■■■□□ 2.53
DDR1-255ENST00000504927 UBR1Q8IWV7 1749 aa30.88■■■□□ 2.53
DDR1-255ENST00000504927 STAG3Q9UJ98 1225 aa30.88■■■□□ 2.53
DDR1-255ENST00000504927 SETD5Q9C0A6 1442 aa30.86■■■□□ 2.53
DDR1-255ENST00000504927 ILDR1Q86SU0 546 aaPredicted RBP30.85■■■□□ 2.53
DDR1-255ENST00000504927 PIK3C2BO00750 1634 aa30.84■■■□□ 2.53
DDR1-255ENST00000504927 SLC4A1APQ9BWU0 796 aaKnown RBP30.82■■■□□ 2.52
DDR1-255ENST00000504927 E9PCH4 1651 aa30.81■■■□□ 2.52
DDR1-255ENST00000504927 LTBP4Q8N2S1 1624 aa30.79■■■□□ 2.52
DDR1-255ENST00000504927 EID1Q9Y6B2 187 aa30.76■■■□□ 2.51
DDR1-255ENST00000504927 CERKQ8TCT0 537 aa30.75■■■□□ 2.51
DDR1-255ENST00000504927 HRCP23327 699 aa30.74■■■□□ 2.51
DDR1-255ENST00000504927 TXNDC2Q86VQ3 553 aa30.73■■■□□ 2.51
DDR1-255ENST00000504927 TMEM2Q9UHN6 1383 aa30.73■■■□□ 2.51
DDR1-255ENST00000504927 KDM5AP29375 1690 aaKnown RBP30.73■■■□□ 2.51
DDR1-255ENST00000504927 ZNF335Q9H4Z2 1342 aaPredicted RBP30.73■■■□□ 2.51
DDR1-255ENST00000504927 MED14O60244 1454 aa30.72■■■□□ 2.51
DDR1-255ENST00000504927 ARHGAP23Q9P227 1491 aa30.72■■■□□ 2.51
DDR1-255ENST00000504927 SLIT1O75093 1534 aa30.72■■■□□ 2.51
DDR1-255ENST00000504927 RAB3GAP2Q9H2M9 1393 aa30.71■■■□□ 2.51
DDR1-255ENST00000504927 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
DDR1-255ENST00000504927 HDGFP51858 240 aaKnown RBP30.7■■■□□ 2.51
DDR1-255ENST00000504927 NPHP4O75161 1426 aaPredicted RBP30.7■■■□□ 2.5
DDR1-255ENST00000504927 ADGRB3O60242 1522 aa30.69■■■□□ 2.5
DDR1-255ENST00000504927 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
DDR1-255ENST00000504927 LTKP29376 864 aa30.68■■■□□ 2.5
DDR1-255ENST00000504927 CHGAP10645 457 aaKnown RBP30.67■■■□□ 2.5
DDR1-255ENST00000504927 FBXO41Q8TF61 875 aa30.67■■■□□ 2.5
DDR1-255ENST00000504927 SCAF11Q99590 1463 aaKnown RBP30.67■■■□□ 2.5
DDR1-255ENST00000504927 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
DDR1-255ENST00000504927 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
DDR1-255ENST00000504927 TMEM131LA2VDJ0 1609 aa30.6■■■□□ 2.49
DDR1-255ENST00000504927 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms