RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 PRDM15P57071 1507 aaPredicted RBP20.96■□□□□ 0.95
DDR1-253ENST00000504651 ADAMTSL3P82987 1691 aa20.94■□□□□ 0.94
DDR1-253ENST00000504651 MLECQ14165 292 aa20.94■□□□□ 0.94
DDR1-253ENST00000504651 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
DDR1-253ENST00000504651 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
DDR1-253ENST00000504651 SETD5Q9C0A6 1442 aa20.93■□□□□ 0.94
DDR1-253ENST00000504651 CEP152O94986 1710 aa20.92■□□□□ 0.94
DDR1-253ENST00000504651 CLTCQ00610 1675 aaKnown RBP20.91■□□□□ 0.94
DDR1-253ENST00000504651 GGT6Q6P531 493 aa20.91■□□□□ 0.94
DDR1-253ENST00000504651 FAM135AQ9P2D6 1515 aa20.91■□□□□ 0.94
DDR1-253ENST00000504651 RIMS1Q86UR5 1692 aaKnown RBP20.9■□□□□ 0.94
DDR1-253ENST00000504651 KDM5DQ9BY66 1539 aa20.9■□□□□ 0.94
DDR1-253ENST00000504651 RAB3GAP2Q9H2M9 1393 aa20.87■□□□□ 0.93
DDR1-253ENST00000504651 MROH2AA6NES4 1674 aa20.87■□□□□ 0.93
DDR1-253ENST00000504651 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
DDR1-253ENST00000504651 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
DDR1-253ENST00000504651 KANK1Q14678 1352 aa20.86■□□□□ 0.93
DDR1-253ENST00000504651 ABCC3O15438 1527 aa20.85■□□□□ 0.93
DDR1-253ENST00000504651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDR1-253ENST00000504651 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
DDR1-253ENST00000504651 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
DDR1-253ENST00000504651 ESF1Q9H501 851 aaKnown RBP20.83■□□□□ 0.93
DDR1-253ENST00000504651 CNTLNQ9NXG0 1405 aa20.83■□□□□ 0.93
DDR1-253ENST00000504651 TET3O43151 1660 aa20.82■□□□□ 0.92
DDR1-253ENST00000504651 PPP6R1Q9UPN7 881 aa20.81■□□□□ 0.92
DDR1-253ENST00000504651 LMTK2Q8IWU2 1503 aa20.81■□□□□ 0.92
DDR1-253ENST00000504651 NUP155O75694 1391 aa20.8■□□□□ 0.92
DDR1-253ENST00000504651 C3P01024 1663 aa20.8■□□□□ 0.92
DDR1-253ENST00000504651 WASHC2CQ9Y4E1 1318 aa20.79■□□□□ 0.92
DDR1-253ENST00000504651 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
DDR1-253ENST00000504651 EFCAB6Q5THR3 1501 aa20.78■□□□□ 0.92
DDR1-253ENST00000504651 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
DDR1-253ENST00000504651 PZPP20742 1482 aa20.75■□□□□ 0.91
DDR1-253ENST00000504651 E9PCH4 1651 aa20.75■□□□□ 0.91
DDR1-253ENST00000504651 KDM4FA0A1W2PPD8 638 aa20.75■□□□□ 0.91
DDR1-253ENST00000504651 PTPRMP28827 1452 aa20.75■□□□□ 0.91
DDR1-253ENST00000504651 HRCP23327 699 aa20.72■□□□□ 0.91
DDR1-253ENST00000504651 ZMYM3Q14202 1370 aa20.72■□□□□ 0.91
DDR1-253ENST00000504651 PREX1Q8TCU6 1659 aa20.71■□□□□ 0.91
DDR1-253ENST00000504651 NPATQ14207 1427 aa20.7■□□□□ 0.9
DDR1-253ENST00000504651 ARHGAP31Q2M1Z3 1444 aa20.7■□□□□ 0.9
DDR1-253ENST00000504651 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
DDR1-253ENST00000504651 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
DDR1-253ENST00000504651 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
DDR1-253ENST00000504651 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
DDR1-253ENST00000504651 CFAP65Q6ZU64 1925 aaKnown RBP20.66■□□□□ 0.9
DDR1-253ENST00000504651 ERVK-7P63135 1459 aa20.66■□□□□ 0.9
DDR1-253ENST00000504651 SPATA31D1Q6ZQQ2 1576 aa20.66■□□□□ 0.9
DDR1-253ENST00000504651 CEBPAP49715 358 aaPredicted RBP20.65■□□□□ 0.9
DDR1-253ENST00000504651 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
DDR1-253ENST00000504651 PKD2Q13563 968 aa20.62■□□□□ 0.89
DDR1-253ENST00000504651 MYO3AQ8NEV4 1616 aa20.62■□□□□ 0.89
DDR1-253ENST00000504651 SYNMO15061 1565 aa20.61■□□□□ 0.89
DDR1-253ENST00000504651 FBXO31Q5XUX0 539 aaPredicted RBP20.59■□□□□ 0.89
DDR1-253ENST00000504651 NOS1P29475 1434 aa20.59■□□□□ 0.89
DDR1-253ENST00000504651 TNRQ92752 1358 aa20.59■□□□□ 0.89
DDR1-253ENST00000504651 TRPM2O94759 1503 aa20.58■□□□□ 0.89
DDR1-253ENST00000504651 ZNF142P52746 1687 aaPredicted RBP20.56■□□□□ 0.88
DDR1-253ENST00000504651 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
DDR1-253ENST00000504651 FOXD1Q16676 465 aa20.55■□□□□ 0.88
DDR1-253ENST00000504651 PIK3C2BO00750 1634 aa20.55■□□□□ 0.88
DDR1-253ENST00000504651 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
DDR1-253ENST00000504651 PTPRTO14522 1441 aa20.54■□□□□ 0.88
DDR1-253ENST00000504651 CLTCL1P53675 1640 aa20.54■□□□□ 0.88
DDR1-253ENST00000504651 SETD1BQ9UPS6 1966 aaKnown RBP20.52■□□□□ 0.88
DDR1-253ENST00000504651 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
DDR1-253ENST00000504651 NLRP1Q9C000 1473 aa20.52■□□□□ 0.88
DDR1-253ENST00000504651 UHRF1BP1Q6BDS2 1440 aa20.52■□□□□ 0.87
DDR1-253ENST00000504651 PLA2R1Q13018 1463 aa20.5■□□□□ 0.87
DDR1-253ENST00000504651 KIF1BO60333 1816 aa20.49■□□□□ 0.87
DDR1-253ENST00000504651 ADGRB3O60242 1522 aa20.48■□□□□ 0.87
DDR1-253ENST00000504651 UBR1Q8IWV7 1749 aa20.48■□□□□ 0.87
DDR1-253ENST00000504651 A2ML1A8K2U0 1454 aa20.48■□□□□ 0.87
DDR1-253ENST00000504651 KDM5AP29375 1690 aaKnown RBP20.48■□□□□ 0.87
DDR1-253ENST00000504651 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
DDR1-253ENST00000504651 MYO5BQ9ULV0 1848 aa20.46■□□□□ 0.87
DDR1-253ENST00000504651 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
DDR1-253ENST00000504651 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
DDR1-253ENST00000504651 SLC52A1Q9NWF4 448 aa20.44■□□□□ 0.86
DDR1-253ENST00000504651 TMEM131LA2VDJ0 1609 aa20.44■□□□□ 0.86
DDR1-253ENST00000504651 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
DDR1-253ENST00000504651 IDI1Q13907 227 aa20.42■□□□□ 0.86
DDR1-253ENST00000504651 STAG3Q9UJ98 1225 aa20.4■□□□□ 0.86
DDR1-253ENST00000504651 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
DDR1-253ENST00000504651 NEURL4Q96JN8 1562 aa20.37■□□□□ 0.85
DDR1-253ENST00000504651 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
DDR1-253ENST00000504651 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
DDR1-253ENST00000504651 SPATA31E1Q6ZUB1 1445 aa20.33■□□□□ 0.84
DDR1-253ENST00000504651 IFT172Q9UG01 1749 aa20.33■□□□□ 0.84
DDR1-253ENST00000504651 SLIT1O75093 1534 aa20.32■□□□□ 0.84
DDR1-253ENST00000504651 PPLO60437 1756 aa20.32■□□□□ 0.84
DDR1-253ENST00000504651 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
DDR1-253ENST00000504651 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
DDR1-253ENST00000504651 ARHGAP23Q9P227 1491 aa20.3■□□□□ 0.84
DDR1-253ENST00000504651 CLSPNQ9HAW4 1339 aa20.3■□□□□ 0.84
DDR1-253ENST00000504651 ZNF326Q5BKZ1 582 aaKnown RBP20.3■□□□□ 0.84
DDR1-253ENST00000504651 SIN3AQ96ST3 1273 aa20.3■□□□□ 0.84
DDR1-253ENST00000504651 HSPA2P54652 639 aa20.29■□□□□ 0.84
DDR1-253ENST00000504651 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
DDR1-253ENST00000504651 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms