RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 AGLP35573 1532 aa20.48■□□□□ 0.87
CYSTM1-202ENST00000504227 NUP155O75694 1391 aa20.47■□□□□ 0.87
CYSTM1-202ENST00000504227 KANK1Q14678 1352 aa20.46■□□□□ 0.87
CYSTM1-202ENST00000504227 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
CYSTM1-202ENST00000504227 MLECQ14165 292 aa20.43■□□□□ 0.86
CYSTM1-202ENST00000504227 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
CYSTM1-202ENST00000504227 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
CYSTM1-202ENST00000504227 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
CYSTM1-202ENST00000504227 UNC13BO14795 1591 aa20.41■□□□□ 0.86
CYSTM1-202ENST00000504227 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
CYSTM1-202ENST00000504227 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
CYSTM1-202ENST00000504227 ESF1Q9H501 851 aaKnown RBP20.39■□□□□ 0.85
CYSTM1-202ENST00000504227 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
CYSTM1-202ENST00000504227 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
CYSTM1-202ENST00000504227 PRDM15P57071 1507 aaPredicted RBP20.37■□□□□ 0.85
CYSTM1-202ENST00000504227 KDM5DQ9BY66 1539 aa20.37■□□□□ 0.85
CYSTM1-202ENST00000504227 PZPP20742 1482 aa20.36■□□□□ 0.85
CYSTM1-202ENST00000504227 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
CYSTM1-202ENST00000504227 PKD2Q13563 968 aa20.35■□□□□ 0.85
CYSTM1-202ENST00000504227 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
CYSTM1-202ENST00000504227 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
CYSTM1-202ENST00000504227 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
CYSTM1-202ENST00000504227 IQGAP3Q86VI3 1631 aa20.34■□□□□ 0.85
CYSTM1-202ENST00000504227 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
CYSTM1-202ENST00000504227 ABCC3O15438 1527 aa20.3■□□□□ 0.84
CYSTM1-202ENST00000504227 LMTK2Q8IWU2 1503 aa20.3■□□□□ 0.84
CYSTM1-202ENST00000504227 FOXD1Q16676 465 aa20.28■□□□□ 0.84
CYSTM1-202ENST00000504227 CNTLNQ9NXG0 1405 aa20.27■□□□□ 0.84
CYSTM1-202ENST00000504227 TET3O43151 1660 aa20.26■□□□□ 0.83
CYSTM1-202ENST00000504227 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
CYSTM1-202ENST00000504227 CEP152O94986 1710 aa20.25■□□□□ 0.83
CYSTM1-202ENST00000504227 ZMYM3Q14202 1370 aa20.23■□□□□ 0.83
CYSTM1-202ENST00000504227 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
CYSTM1-202ENST00000504227 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
CYSTM1-202ENST00000504227 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
CYSTM1-202ENST00000504227 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
CYSTM1-202ENST00000504227 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
CYSTM1-202ENST00000504227 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
CYSTM1-202ENST00000504227 NPATQ14207 1427 aa20.2■□□□□ 0.82
CYSTM1-202ENST00000504227 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
CYSTM1-202ENST00000504227 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
CYSTM1-202ENST00000504227 E9PCH4 1651 aa20.18■□□□□ 0.82
CYSTM1-202ENST00000504227 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
CYSTM1-202ENST00000504227 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
CYSTM1-202ENST00000504227 PTPRTO14522 1441 aa20.16■□□□□ 0.82
CYSTM1-202ENST00000504227 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
CYSTM1-202ENST00000504227 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
CYSTM1-202ENST00000504227 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
CYSTM1-202ENST00000504227 CFAP65Q6ZU64 1925 aaKnown RBP20.14■□□□□ 0.81
CYSTM1-202ENST00000504227 PLPPR3Q6T4P5 718 aa20.14■□□□□ 0.81
CYSTM1-202ENST00000504227 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
CYSTM1-202ENST00000504227 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
CYSTM1-202ENST00000504227 NOS1P29475 1434 aa20.12■□□□□ 0.81
CYSTM1-202ENST00000504227 NEUROD1Q13562 356 aa20.12■□□□□ 0.81
CYSTM1-202ENST00000504227 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
CYSTM1-202ENST00000504227 ERVK-7P63135 1459 aa20.11■□□□□ 0.81
CYSTM1-202ENST00000504227 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
CYSTM1-202ENST00000504227 SLC52A1Q9NWF4 448 aa20.1■□□□□ 0.81
CYSTM1-202ENST00000504227 KDM4FA0A1W2PPD8 638 aa20.09■□□□□ 0.81
CYSTM1-202ENST00000504227 TRPM2O94759 1503 aa20.08■□□□□ 0.81
CYSTM1-202ENST00000504227 SPHKAPQ2M3C7 1700 aa20.08■□□□□ 0.81
CYSTM1-202ENST00000504227 TNRQ92752 1358 aa20.08■□□□□ 0.8
CYSTM1-202ENST00000504227 C3P01024 1663 aa20.07■□□□□ 0.8
CYSTM1-202ENST00000504227 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
CYSTM1-202ENST00000504227 PTPRMP28827 1452 aa20.06■□□□□ 0.8
CYSTM1-202ENST00000504227 SPATA31D1Q6ZQQ2 1576 aa20.06■□□□□ 0.8
CYSTM1-202ENST00000504227 IDI1Q13907 227 aa20.05■□□□□ 0.8
CYSTM1-202ENST00000504227 CHGAP10645 457 aaKnown RBP20.03■□□□□ 0.8
CYSTM1-202ENST00000504227 SYNMO15061 1565 aa20.03■□□□□ 0.8
CYSTM1-202ENST00000504227 STAG3Q9UJ98 1225 aa20.01■□□□□ 0.79
CYSTM1-202ENST00000504227 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
CYSTM1-202ENST00000504227 CLTCL1P53675 1640 aa20■□□□□ 0.79
CYSTM1-202ENST00000504227 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
CYSTM1-202ENST00000504227 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
CYSTM1-202ENST00000504227 ZEB1P37275 1124 aaPredicted RBP19.99■□□□□ 0.79
CYSTM1-202ENST00000504227 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
CYSTM1-202ENST00000504227 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
CYSTM1-202ENST00000504227 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
CYSTM1-202ENST00000504227 PIK3C2BO00750 1634 aa19.97■□□□□ 0.79
CYSTM1-202ENST00000504227 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
CYSTM1-202ENST00000504227 L3MBTL2Q969R5 705 aa19.95■□□□□ 0.78
CYSTM1-202ENST00000504227 SPATA31E1Q6ZUB1 1445 aa19.94■□□□□ 0.78
CYSTM1-202ENST00000504227 KIF1BO60333 1816 aa19.93■□□□□ 0.78
CYSTM1-202ENST00000504227 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
CYSTM1-202ENST00000504227 RPGRIP1LQ68CZ1 1315 aa19.92■□□□□ 0.78
CYSTM1-202ENST00000504227 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
CYSTM1-202ENST00000504227 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
CYSTM1-202ENST00000504227 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
CYSTM1-202ENST00000504227 ADGRB3O60242 1522 aa19.9■□□□□ 0.78
CYSTM1-202ENST00000504227 NEURL4Q96JN8 1562 aa19.9■□□□□ 0.78
CYSTM1-202ENST00000504227 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
CYSTM1-202ENST00000504227 TMEM131LA2VDJ0 1609 aa19.88■□□□□ 0.77
CYSTM1-202ENST00000504227 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
CYSTM1-202ENST00000504227 HDGFP51858 240 aaKnown RBP19.88■□□□□ 0.77
CYSTM1-202ENST00000504227 MYO3AQ8NEV4 1616 aa19.87■□□□□ 0.77
CYSTM1-202ENST00000504227 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
CYSTM1-202ENST00000504227 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.85■□□□□ 0.77
CYSTM1-202ENST00000504227 CEP170BQ9Y4F5 1589 aaPredicted RBP19.84■□□□□ 0.77
CYSTM1-202ENST00000504227 VGFO15240 615 aaPredicted RBP19.84■□□□□ 0.77
CYSTM1-202ENST00000504227 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms