RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.32■■□□□ 1.96
DDR1-252ENST00000504152 WASHC2CQ9Y4E1 1318 aa27.32■■□□□ 1.96
DDR1-252ENST00000504152 PTPRMP28827 1452 aa27.31■■□□□ 1.96
DDR1-252ENST00000504152 RIMS1Q86UR5 1692 aaKnown RBP27.3■■□□□ 1.96
DDR1-252ENST00000504152 FER1L4A9Z1Z3 1794 aa27.3■■□□□ 1.96
DDR1-252ENST00000504152 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
DDR1-252ENST00000504152 NAIPQ13075 1403 aa27.28■■□□□ 1.96
DDR1-252ENST00000504152 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
DDR1-252ENST00000504152 KANK1Q14678 1352 aa27.27■■□□□ 1.96
DDR1-252ENST00000504152 RNF17Q9BXT8 1623 aaKnown RBP27.27■■□□□ 1.96
DDR1-252ENST00000504152 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
DDR1-252ENST00000504152 PLPPR3Q6T4P5 718 aa27.24■■□□□ 1.95
DDR1-252ENST00000504152 ZMYM3Q14202 1370 aa27.22■■□□□ 1.95
DDR1-252ENST00000504152 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
DDR1-252ENST00000504152 FAM135AQ9P2D6 1515 aa27.21■■□□□ 1.95
DDR1-252ENST00000504152 CLTCQ00610 1675 aaKnown RBP27.21■■□□□ 1.95
DDR1-252ENST00000504152 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
DDR1-252ENST00000504152 DEPDC5O75140 1603 aa27.19■■□□□ 1.94
DDR1-252ENST00000504152 KDM5DQ9BY66 1539 aa27.19■■□□□ 1.94
DDR1-252ENST00000504152 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
DDR1-252ENST00000504152 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
DDR1-252ENST00000504152 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
DDR1-252ENST00000504152 MROH2AA6NES4 1674 aa27.16■■□□□ 1.94
DDR1-252ENST00000504152 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
DDR1-252ENST00000504152 NUP155O75694 1391 aa27.15■■□□□ 1.94
DDR1-252ENST00000504152 TRIM52Q96A61 297 aa27.14■■□□□ 1.94
DDR1-252ENST00000504152 ABCC3O15438 1527 aa27.14■■□□□ 1.94
DDR1-252ENST00000504152 ZC3H13Q5T200 1668 aaKnown RBP27.13■■□□□ 1.93
DDR1-252ENST00000504152 C3P01024 1663 aa27.11■■□□□ 1.93
DDR1-252ENST00000504152 UNC13BO14795 1591 aa27.11■■□□□ 1.93
DDR1-252ENST00000504152 CEP152O94986 1710 aa27.1■■□□□ 1.93
DDR1-252ENST00000504152 VWDEQ8N2E2 1590 aa27.09■■□□□ 1.93
DDR1-252ENST00000504152 LMTK2Q8IWU2 1503 aa27.07■■□□□ 1.92
DDR1-252ENST00000504152 HRCP23327 699 aa27.06■■□□□ 1.92
DDR1-252ENST00000504152 FBXO31Q5XUX0 539 aaPredicted RBP27.06■■□□□ 1.92
DDR1-252ENST00000504152 SETD1BQ9UPS6 1966 aaKnown RBP27.06■■□□□ 1.92
DDR1-252ENST00000504152 FBXO41Q8TF61 875 aa27.05■■□□□ 1.92
DDR1-252ENST00000504152 RAB3GAP2Q9H2M9 1393 aa27.04■■□□□ 1.92
DDR1-252ENST00000504152 ARHGAP31Q2M1Z3 1444 aa27.04■■□□□ 1.92
DDR1-252ENST00000504152 PZPP20742 1482 aa27.04■■□□□ 1.92
DDR1-252ENST00000504152 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
DDR1-252ENST00000504152 NPATQ14207 1427 aa27.03■■□□□ 1.92
DDR1-252ENST00000504152 IQGAP3Q86VI3 1631 aa27.02■■□□□ 1.92
DDR1-252ENST00000504152 CFAP65Q6ZU64 1925 aaKnown RBP27.01■■□□□ 1.91
DDR1-252ENST00000504152 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
DDR1-252ENST00000504152 TET3O43151 1660 aa26.98■■□□□ 1.91
DDR1-252ENST00000504152 EFCAB6Q5THR3 1501 aa26.96■■□□□ 1.91
DDR1-252ENST00000504152 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
DDR1-252ENST00000504152 TNRQ92752 1358 aa26.95■■□□□ 1.9
DDR1-252ENST00000504152 RPRD2Q5VT52 1461 aaKnown RBP26.94■■□□□ 1.9
DDR1-252ENST00000504152 MPHOSPH9Q99550 1183 aa26.94■■□□□ 1.9
DDR1-252ENST00000504152 PKD2Q13563 968 aa26.93■■□□□ 1.9
DDR1-252ENST00000504152 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
DDR1-252ENST00000504152 PREX1Q8TCU6 1659 aa26.91■■□□□ 1.9
DDR1-252ENST00000504152 UHRF1BP1Q6BDS2 1440 aa26.9■■□□□ 1.9
DDR1-252ENST00000504152 SPATA31D1Q6ZQQ2 1576 aa26.9■■□□□ 1.9
DDR1-252ENST00000504152 E9PCH4 1651 aa26.89■■□□□ 1.89
DDR1-252ENST00000504152 PCGF6Q9BYE7 350 aa26.88■■□□□ 1.89
DDR1-252ENST00000504152 NOS1P29475 1434 aa26.86■■□□□ 1.89
DDR1-252ENST00000504152 HSPA2P54652 639 aa26.86■■□□□ 1.89
DDR1-252ENST00000504152 SLC52A1Q9NWF4 448 aa26.86■■□□□ 1.89
DDR1-252ENST00000504152 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
DDR1-252ENST00000504152 IDI1Q13907 227 aa26.82■■□□□ 1.88
DDR1-252ENST00000504152 MYO3AQ8NEV4 1616 aa26.8■■□□□ 1.88
DDR1-252ENST00000504152 FOXD1Q16676 465 aa26.8■■□□□ 1.88
DDR1-252ENST00000504152 STAG3Q9UJ98 1225 aa26.8■■□□□ 1.88
DDR1-252ENST00000504152 THEMISQ8N1K5 641 aaPredicted RBP26.79■■□□□ 1.88
DDR1-252ENST00000504152 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
DDR1-252ENST00000504152 PTPRTO14522 1441 aa26.77■■□□□ 1.88
DDR1-252ENST00000504152 SYNMO15061 1565 aa26.76■■□□□ 1.87
DDR1-252ENST00000504152 CEP170BQ9Y4F5 1589 aaPredicted RBP26.76■■□□□ 1.87
DDR1-252ENST00000504152 SPHKAPQ2M3C7 1700 aa26.73■■□□□ 1.87
DDR1-252ENST00000504152 ZNF142P52746 1687 aaPredicted RBP26.73■■□□□ 1.87
DDR1-252ENST00000504152 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
DDR1-252ENST00000504152 CHGAP10645 457 aaKnown RBP26.71■■□□□ 1.87
DDR1-252ENST00000504152 PIK3C2BO00750 1634 aa26.68■■□□□ 1.86
DDR1-252ENST00000504152 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
DDR1-252ENST00000504152 TRPM2O94759 1503 aa26.67■■□□□ 1.86
DDR1-252ENST00000504152 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
DDR1-252ENST00000504152 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
DDR1-252ENST00000504152 KDM5AP29375 1690 aaKnown RBP26.63■■□□□ 1.85
DDR1-252ENST00000504152 STRCQ7RTU9 1775 aa26.62■■□□□ 1.85
DDR1-252ENST00000504152 HDGFP51858 240 aaKnown RBP26.62■■□□□ 1.85
DDR1-252ENST00000504152 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
DDR1-252ENST00000504152 ANKRD30BQ9BXX2 1392 aa26.61■■□□□ 1.85
DDR1-252ENST00000504152 EID1Q9Y6B2 187 aa26.61■■□□□ 1.85
DDR1-252ENST00000504152 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
DDR1-252ENST00000504152 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
DDR1-252ENST00000504152 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
DDR1-252ENST00000504152 TMEM131LA2VDJ0 1609 aa26.59■■□□□ 1.85
DDR1-252ENST00000504152 ZNF326Q5BKZ1 582 aaKnown RBP26.59■■□□□ 1.85
DDR1-252ENST00000504152 TXNDC2Q86VQ3 553 aa26.59■■□□□ 1.85
DDR1-252ENST00000504152 NCKAP5LQ9HCH0 1330 aa26.59■■□□□ 1.85
DDR1-252ENST00000504152 KIF1BO60333 1816 aa26.58■■□□□ 1.84
DDR1-252ENST00000504152 TMEM2Q9UHN6 1383 aa26.58■■□□□ 1.84
DDR1-252ENST00000504152 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
DDR1-252ENST00000504152 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.55■■□□□ 1.84
DDR1-252ENST00000504152 CERKQ8TCT0 537 aa26.55■■□□□ 1.84
DDR1-252ENST00000504152 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
DDR1-252ENST00000504152 SLIT1O75093 1534 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms