RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TNRQ92752 1358 aa25.86■■□□□ 1.73
PDLIM7-210ENST00000503827 ANKLE2Q86XL3 938 aa25.84■■□□□ 1.73
PDLIM7-210ENST00000503827 VWDEQ8N2E2 1590 aa25.83■■□□□ 1.73
PDLIM7-210ENST00000503827 FBXO31Q5XUX0 539 aaPredicted RBP25.82■■□□□ 1.72
PDLIM7-210ENST00000503827 DHX29Q7Z478 1369 aaKnown RBP25.81■■□□□ 1.72
PDLIM7-210ENST00000503827 PZPP20742 1482 aa25.8■■□□□ 1.72
PDLIM7-210ENST00000503827 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PDLIM7-210ENST00000503827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.8■■□□□ 1.723e-6■■■■□ 26.4
PDLIM7-210ENST00000503827 RTEL1-TNFRSF6BF6WH68 1400 aa25.8■■□□□ 1.72
PDLIM7-210ENST00000503827 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
PDLIM7-210ENST00000503827 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
PDLIM7-210ENST00000503827 FAM135AQ9P2D6 1515 aa25.78■■□□□ 1.72
PDLIM7-210ENST00000503827 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
PDLIM7-210ENST00000503827 MTUS2Q5JR59 1369 aa25.78■■□□□ 1.72
PDLIM7-210ENST00000503827 KIF3BO15066 747 aa25.76■■□□□ 1.71
PDLIM7-210ENST00000503827 ZNF644Q9H582 1327 aaPredicted RBP25.76■■□□□ 1.71
PDLIM7-210ENST00000503827 NPHP4O75161 1426 aaPredicted RBP25.76■■□□□ 1.71
PDLIM7-210ENST00000503827 MED14O60244 1454 aa25.76■■□□□ 1.71
PDLIM7-210ENST00000503827 MBD5Q9P267 1494 aa25.76■■□□□ 1.71
PDLIM7-210ENST00000503827 UGGT1Q9NYU2 1555 aa25.75■■□□□ 1.71
PDLIM7-210ENST00000503827 NLRP1Q9C000 1473 aa25.75■■□□□ 1.71
PDLIM7-210ENST00000503827 IQGAP1P46940 1657 aa25.74■■□□□ 1.71
PDLIM7-210ENST00000503827 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
PDLIM7-210ENST00000503827 WASHC2CQ9Y4E1 1318 aa25.73■■□□□ 1.71
PDLIM7-210ENST00000503827 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
PDLIM7-210ENST00000503827 SENP3Q9H4L4 574 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-210ENST00000503827 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.7
PDLIM7-210ENST00000503827 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
PDLIM7-210ENST00000503827 SYNMO15061 1565 aa25.69■■□□□ 1.7
PDLIM7-210ENST00000503827 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
PDLIM7-210ENST00000503827 LRRC7Q96NW7 1537 aa25.67■■□□□ 1.7
PDLIM7-210ENST00000503827 EHBP1L1Q8N3D4 1523 aa25.64■■□□□ 1.7
PDLIM7-210ENST00000503827 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
PDLIM7-210ENST00000503827 RSPH4AQ5TD94 716 aa25.61■■□□□ 1.69
PDLIM7-210ENST00000503827 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
PDLIM7-210ENST00000503827 RGS17Q9UGC6 210 aaPredicted RBP25.57■■□□□ 1.68
PDLIM7-210ENST00000503827 ZC3H13Q5T200 1668 aaKnown RBP25.57■■□□□ 1.68
PDLIM7-210ENST00000503827 CAMSAP2Q08AD1 1489 aa25.56■■□□□ 1.68
PDLIM7-210ENST00000503827 CFAP65Q6ZU64 1925 aaKnown RBP25.52■■□□□ 1.68
PDLIM7-210ENST00000503827 TSPY4P0CV99 314 aa25.51■■□□□ 1.67
PDLIM7-210ENST00000503827 TSPY10P0CW01 314 aa25.51■■□□□ 1.67
PDLIM7-210ENST00000503827 ABCC3O15438 1527 aa25.51■■□□□ 1.67
PDLIM7-210ENST00000503827 UBR1Q8IWV7 1749 aa25.51■■□□□ 1.67
PDLIM7-210ENST00000503827 XIRP1Q702N8 1843 aaKnown RBP25.51■■□□□ 1.67
PDLIM7-210ENST00000503827 ARHGEF5Q12774 1597 aa25.5■■□□□ 1.67
PDLIM7-210ENST00000503827 ERVK-7P63135 1459 aa25.49■■□□□ 1.67
PDLIM7-210ENST00000503827 SCAF11Q99590 1463 aaKnown RBP25.48■■□□□ 1.67
PDLIM7-210ENST00000503827 NCOA2Q15596 1464 aa25.47■■□□□ 1.67
PDLIM7-210ENST00000503827 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
PDLIM7-210ENST00000503827 CEP152O94986 1710 aa25.43■■□□□ 1.66
PDLIM7-210ENST00000503827 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
PDLIM7-210ENST00000503827 FAM135BQ49AJ0 1406 aa25.42■■□□□ 1.66
PDLIM7-210ENST00000503827 POTEAQ6S8J7 498 aa25.41■■□□□ 1.66
PDLIM7-210ENST00000503827 LTKP29376 864 aa25.4■■□□□ 1.66
PDLIM7-210ENST00000503827 SLIT1O75093 1534 aa25.4■■□□□ 1.66
PDLIM7-210ENST00000503827 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
PDLIM7-210ENST00000503827 MAST1Q9Y2H9 1570 aa25.39■■□□□ 1.66
PDLIM7-210ENST00000503827 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
PDLIM7-210ENST00000503827 EID1Q9Y6B2 187 aa25.38■■□□□ 1.65
PDLIM7-210ENST00000503827 ROBO1Q9Y6N7 1651 aa25.34■■□□□ 1.65
PDLIM7-210ENST00000503827 TMEM94Q12767 1356 aa25.3■■□□□ 1.64
PDLIM7-210ENST00000503827 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
PDLIM7-210ENST00000503827 PIK3C2BO00750 1634 aa25.29■■□□□ 1.64
PDLIM7-210ENST00000503827 ARHGAP31Q2M1Z3 1444 aa25.28■■□□□ 1.64
PDLIM7-210ENST00000503827 DUOX2Q9NRD8 1548 aa25.27■■□□□ 1.64
PDLIM7-210ENST00000503827 TMEM2Q9UHN6 1383 aa25.27■■□□□ 1.64
PDLIM7-210ENST00000503827 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
PDLIM7-210ENST00000503827 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
PDLIM7-210ENST00000503827 KCNA6P17658 529 aa25.25■■□□□ 1.63
PDLIM7-210ENST00000503827 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
PDLIM7-210ENST00000503827 KDM5AP29375 1690 aaKnown RBP25.24■■□□□ 1.63
PDLIM7-210ENST00000503827 PRDM15P57071 1507 aaPredicted RBP25.23■■□□□ 1.63
PDLIM7-210ENST00000503827 MAP3K1Q13233 1512 aa25.23■■□□□ 1.63
PDLIM7-210ENST00000503827 PHLPP1O60346 1717 aa25.23■■□□□ 1.63
PDLIM7-210ENST00000503827 EFCAB6Q5THR3 1501 aa25.2■■□□□ 1.62
PDLIM7-210ENST00000503827 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-210ENST00000503827 TET3O43151 1660 aa25.18■■□□□ 1.62
PDLIM7-210ENST00000503827 SLC26A8Q96RN1 970 aa25.18■■□□□ 1.62
PDLIM7-210ENST00000503827 JCADQ9P266 1359 aa25.18■■□□□ 1.62
PDLIM7-210ENST00000503827 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
PDLIM7-210ENST00000503827 MSH6P52701 1360 aa25.17■■□□□ 1.62
PDLIM7-210ENST00000503827 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
PDLIM7-210ENST00000503827 NWD1Q149M9 1564 aa25.15■■□□□ 1.62
PDLIM7-210ENST00000503827 ERBINQ96RT1 1412 aa25.15■■□□□ 1.62
PDLIM7-210ENST00000503827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.15■■□□□ 1.62
PDLIM7-210ENST00000503827 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
PDLIM7-210ENST00000503827 KIF15Q9NS87 1388 aa25.14■■□□□ 1.61
PDLIM7-210ENST00000503827 IDI1Q13907 227 aa25.13■■□□□ 1.61
PDLIM7-210ENST00000503827 KANK1Q14678 1352 aa25.13■■□□□ 1.61
PDLIM7-210ENST00000503827 CROCC2H7BZ55 1655 aa25.1■■□□□ 1.61
PDLIM7-210ENST00000503827 BCANQ96GW7 911 aa25.1■■□□□ 1.61
PDLIM7-210ENST00000503827 RRP7BPQ9NSQ0 103 aa25.09■■□□□ 1.61
PDLIM7-210ENST00000503827 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.61
PDLIM7-210ENST00000503827 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.6
PDLIM7-210ENST00000503827 ADGRB3O60242 1522 aa25.07■■□□□ 1.6
PDLIM7-210ENST00000503827 MEX3CQ5U5Q3 659 aaKnown RBP25.06■■□□□ 1.6
PDLIM7-210ENST00000503827 ZNF772Q68DY9 489 aaPredicted RBP25.06■■□□□ 1.6
PDLIM7-210ENST00000503827 CHD2O14647 1828 aaKnown RBP25.06■■□□□ 1.6
PDLIM7-210ENST00000503827 LMTK2Q8IWU2 1503 aa25.05■■□□□ 1.6
PDLIM7-210ENST00000503827 SPATA31A6Q5VVP1 1343 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms