RNA–Protein interactions for RNA: ENST00000503498.1

EFCAB12-202, Transcript of EF-hand calcium binding domain 12, humanhuman

TSL 2

Gene EFCAB12, Length 5,607 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB12-202ENST00000503498 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
EFCAB12-202ENST00000503498 RALBP1Q15311 655 aa13.43□□□□□ -0.26
EFCAB12-202ENST00000503498 CENPHQ9H3R5 247 aa13.43□□□□□ -0.26
EFCAB12-202ENST00000503498 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
EFCAB12-202ENST00000503498 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
EFCAB12-202ENST00000503498 CALCOCO1Q9P1Z2 691 aa13.42□□□□□ -0.26
EFCAB12-202ENST00000503498 H3BQV1 296 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 CCP110O43303 1012 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 TNNT1P13805 278 aa13.41□□□□□ -0.26
EFCAB12-202ENST00000503498 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
EFCAB12-202ENST00000503498 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
EFCAB12-202ENST00000503498 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 APBB1O00213 710 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 PDIA4P13667 645 aaKnown RBP13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 NPHP1O15259 732 aa13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
EFCAB12-202ENST00000503498 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
EFCAB12-202ENST00000503498 GPATCH3Q96I76 525 aa13.38□□□□□ -0.27
EFCAB12-202ENST00000503498 SKIDA1Q1XH10 827 aa13.38□□□□□ -0.27
EFCAB12-202ENST00000503498 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
EFCAB12-202ENST00000503498 HOOK1Q9UJC3 728 aaKnown RBP13.37□□□□□ -0.27
EFCAB12-202ENST00000503498 UQCRHLA0A096LP55 91 aa13.37□□□□□ -0.27
EFCAB12-202ENST00000503498 UQCRHP07919 91 aa13.37□□□□□ -0.27
EFCAB12-202ENST00000503498 NF2P35240 595 aa13.37□□□□□ -0.27
EFCAB12-202ENST00000503498 DHX37Q8IY37 1157 aaKnown RBP13.37□□□□□ -0.27
EFCAB12-202ENST00000503498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 ERLIN1O75477 346 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 GTF2A1P52655 376 aaPredicted RBP13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 CCDC47Q96A33 483 aaKnown RBP13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 SASS6Q6UVJ0 657 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 SETSIPP0DME0 302 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 CAVIN1Q6NZI2 390 aaKnown RBP13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 ITPRIPQ8IWB1 547 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
EFCAB12-202ENST00000503498 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 PAIP2Q9BPZ3 127 aaKnown RBP13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 MARCH6O60337 910 aa13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 CGNQ9P2M7 1197 aaKnown RBP13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 FAM184AQ8NB25 1140 aa13.35□□□□□ -0.27
EFCAB12-202ENST00000503498 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.35□□□□□ -0.271e-8■■■■■ 101
EFCAB12-202ENST00000503498 EZRP15311 586 aaKnown RBP13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 PDE4AP27815 886 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 HSP90AB2PQ58FF8 381 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 FAM107BQ9H098 131 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 RABEP1Q15276 862 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 CHIC2Q9UKJ5 165 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 GOLGA6L10A0A0M3HER8 536 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 ERLIN2O94905 339 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 BRPF3Q9ULD4 1205 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 TMCO5BA8MYB1 307 aa13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
EFCAB12-202ENST00000503498 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.27
EFCAB12-202ENST00000503498 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 E9PSI1 815 aa13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 CHMP4AQ9BY43 222 aa13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
EFCAB12-202ENST00000503498 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
EFCAB12-202ENST00000503498 ODF2Q5BJF6 829 aa13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 RBM33Q96EV2 1170 aaKnown RBP13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 NAT10Q9H0A0 1025 aaKnown RBP13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 SEPT7Q16181 437 aaKnown RBP13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 PRDM10Q9NQV6 1147 aa13.3□□□□□ -0.28
EFCAB12-202ENST00000503498 CCDC9Q9Y3X0 531 aaKnown RBP13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 SEPT6Q14141 434 aa13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 CFAP57Q96MR6 1250 aa13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 FOXD4L6Q3SYB3 417 aaPredicted RBP13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 FOXD4L3Q6VB84 417 aaPredicted RBP13.29□□□□□ -0.28
EFCAB12-202ENST00000503498 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 DHX8Q14562 1220 aaKnown RBP13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 HOMEZQ8IX15 550 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 TDO2P48775 406 aa13.28□□□□□ -0.28
EFCAB12-202ENST00000503498 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms