RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 EIF2AK4Q9P2K8 1649 aaKnown RBP27.88■■■□□ 2.05
PDLIM7-209ENST00000503346 PLPPR3Q6T4P5 718 aa27.87■■■□□ 2.05
PDLIM7-209ENST00000503346 FAM135AQ9P2D6 1515 aa27.85■■■□□ 2.05
PDLIM7-209ENST00000503346 ZMYM3Q14202 1370 aa27.85■■■□□ 2.05
PDLIM7-209ENST00000503346 RNF17Q9BXT8 1623 aaKnown RBP27.83■■■□□ 2.05
PDLIM7-209ENST00000503346 MROH2AA6NES4 1674 aa27.83■■■□□ 2.05
PDLIM7-209ENST00000503346 ROCK1Q13464 1354 aa27.83■■■□□ 2.05
PDLIM7-209ENST00000503346 KDM5DQ9BY66 1539 aa27.81■■■□□ 2.04
PDLIM7-209ENST00000503346 C3P01024 1663 aa27.8■■■□□ 2.04
PDLIM7-209ENST00000503346 CLTCQ00610 1675 aaKnown RBP27.79■■■□□ 2.04
PDLIM7-209ENST00000503346 WASHC2CQ9Y4E1 1318 aa27.79■■■□□ 2.04
PDLIM7-209ENST00000503346 ITGAEP38570 1179 aa27.78■■■□□ 2.04
PDLIM7-209ENST00000503346 MROH1Q8NDA8 1641 aa27.77■■■□□ 2.04
PDLIM7-209ENST00000503346 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
PDLIM7-209ENST00000503346 LMTK3Q96Q04 1460 aa27.75■■■□□ 2.03
PDLIM7-209ENST00000503346 NPATQ14207 1427 aa27.75■■■□□ 2.03
PDLIM7-209ENST00000503346 ABCC3O15438 1527 aa27.72■■■□□ 2.03
PDLIM7-209ENST00000503346 PRDM15P57071 1507 aaPredicted RBP27.72■■■□□ 2.03
PDLIM7-209ENST00000503346 DEPDC5O75140 1603 aa27.7■■■□□ 2.03
PDLIM7-209ENST00000503346 PZPP20742 1482 aa27.69■■■□□ 2.02
PDLIM7-209ENST00000503346 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
PDLIM7-209ENST00000503346 UHRF1BP1Q6BDS2 1440 aa27.67■■■□□ 2.02
PDLIM7-209ENST00000503346 KANK1Q14678 1352 aa27.66■■■□□ 2.02
PDLIM7-209ENST00000503346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.66■■■□□ 2.02
PDLIM7-209ENST00000503346 PREX1Q8TCU6 1659 aa27.65■■■□□ 2.02
PDLIM7-209ENST00000503346 SETD1BQ9UPS6 1966 aaKnown RBP27.64■■■□□ 2.02
PDLIM7-209ENST00000503346 VWDEQ8N2E2 1590 aa27.63■■■□□ 2.01
PDLIM7-209ENST00000503346 FBXO31Q5XUX0 539 aaPredicted RBP27.61■■■□□ 2.01
PDLIM7-209ENST00000503346 LMTK2Q8IWU2 1503 aa27.61■■■□□ 2.01
PDLIM7-209ENST00000503346 ARHGAP31Q2M1Z3 1444 aa27.59■■■□□ 2.01
PDLIM7-209ENST00000503346 HSPA2P54652 639 aa27.59■■■□□ 2.01
PDLIM7-209ENST00000503346 TNRQ92752 1358 aa27.58■■■□□ 2.01
PDLIM7-209ENST00000503346 CEP152O94986 1710 aa27.58■■■□□ 2.01
PDLIM7-209ENST00000503346 CAMSAP1Q5T5Y3 1602 aa27.57■■■□□ 2
PDLIM7-209ENST00000503346 NAIPQ13075 1403 aa27.57■■■□□ 2
PDLIM7-209ENST00000503346 UNC13BO14795 1591 aa27.55■■■□□ 2
PDLIM7-209ENST00000503346 HFM1A2PYH4 1435 aa27.54■■■□□ 2
PDLIM7-209ENST00000503346 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
PDLIM7-209ENST00000503346 SPATA31D1Q6ZQQ2 1576 aa27.52■■■□□ 2
PDLIM7-209ENST00000503346 ERVK-7P63135 1459 aa27.52■■■□□ 2
PDLIM7-209ENST00000503346 EFCAB6Q5THR3 1501 aa27.48■■□□□ 1.99
PDLIM7-209ENST00000503346 A2ML1A8K2U0 1454 aa27.48■■□□□ 1.99
PDLIM7-209ENST00000503346 CEP170BQ9Y4F5 1589 aaPredicted RBP27.48■■□□□ 1.99
PDLIM7-209ENST00000503346 ZNF142P52746 1687 aaPredicted RBP27.47■■□□□ 1.99
PDLIM7-209ENST00000503346 GCC2Q8IWJ2 1684 aa27.47■■□□□ 1.99
PDLIM7-209ENST00000503346 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
PDLIM7-209ENST00000503346 NUP155O75694 1391 aa27.47■■□□□ 1.99
PDLIM7-209ENST00000503346 IQGAP3Q86VI3 1631 aa27.43■■□□□ 1.98
PDLIM7-209ENST00000503346 RPRD2Q5VT52 1461 aaKnown RBP27.43■■□□□ 1.98
PDLIM7-209ENST00000503346 TET3O43151 1660 aa27.42■■□□□ 1.98
PDLIM7-209ENST00000503346 NOS1P29475 1434 aa27.41■■□□□ 1.98
PDLIM7-209ENST00000503346 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
PDLIM7-209ENST00000503346 UGGT1Q9NYU2 1555 aa27.35■■□□□ 1.97
PDLIM7-209ENST00000503346 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
PDLIM7-209ENST00000503346 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
PDLIM7-209ENST00000503346 SYNMO15061 1565 aa27.32■■□□□ 1.96
PDLIM7-209ENST00000503346 DMRT2Q9Y5R5 561 aa27.32■■□□□ 1.96
PDLIM7-209ENST00000503346 CFAP65Q6ZU64 1925 aaKnown RBP27.3■■□□□ 1.96
PDLIM7-209ENST00000503346 PKD2Q13563 968 aa27.3■■□□□ 1.96
PDLIM7-209ENST00000503346 SLC52A1Q9NWF4 448 aa27.3■■□□□ 1.96
PDLIM7-209ENST00000503346 E9PCH4 1651 aa27.3■■□□□ 1.96
PDLIM7-209ENST00000503346 IDI1Q13907 227 aa27.29■■□□□ 1.96
PDLIM7-209ENST00000503346 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
PDLIM7-209ENST00000503346 SETD5Q9C0A6 1442 aa27.29■■□□□ 1.96
PDLIM7-209ENST00000503346 PTPRTO14522 1441 aa27.28■■□□□ 1.96
PDLIM7-209ENST00000503346 NCKAP5LQ9HCH0 1330 aa27.28■■□□□ 1.96
PDLIM7-209ENST00000503346 ACIN1Q9UKV3 1341 aaKnown RBP27.25■■□□□ 1.95
PDLIM7-209ENST00000503346 UBR1Q8IWV7 1749 aa27.23■■□□□ 1.95
PDLIM7-209ENST00000503346 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
PDLIM7-209ENST00000503346 ANKLE2Q86XL3 938 aa27.22■■□□□ 1.95
PDLIM7-209ENST00000503346 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
PDLIM7-209ENST00000503346 STAG3Q9UJ98 1225 aa27.2■■□□□ 1.94
PDLIM7-209ENST00000503346 KDM5AP29375 1690 aaKnown RBP27.19■■□□□ 1.94
PDLIM7-209ENST00000503346 RAB3GAP2Q9H2M9 1393 aa27.19■■□□□ 1.94
PDLIM7-209ENST00000503346 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
PDLIM7-209ENST00000503346 ADGRB3O60242 1522 aa27.18■■□□□ 1.94
PDLIM7-209ENST00000503346 SLIT1O75093 1534 aa27.18■■□□□ 1.94
PDLIM7-209ENST00000503346 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
PDLIM7-209ENST00000503346 NEURL4Q96JN8 1562 aa27.15■■□□□ 1.94
PDLIM7-209ENST00000503346 MED14O60244 1454 aa27.14■■□□□ 1.94
PDLIM7-209ENST00000503346 HRCP23327 699 aa27.13■■□□□ 1.93
PDLIM7-209ENST00000503346 MPHOSPH9Q99550 1183 aa27.13■■□□□ 1.93
PDLIM7-209ENST00000503346 POLR1AO95602 1720 aaPredicted RBP27.12■■□□□ 1.93
PDLIM7-209ENST00000503346 SPHKAPQ2M3C7 1700 aa27.11■■□□□ 1.93
PDLIM7-209ENST00000503346 NPHP4O75161 1426 aaPredicted RBP27.11■■□□□ 1.93
PDLIM7-209ENST00000503346 LTKP29376 864 aa27.11■■□□□ 1.93
PDLIM7-209ENST00000503346 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
PDLIM7-209ENST00000503346 TRPM2O94759 1503 aa27.11■■□□□ 1.93
PDLIM7-209ENST00000503346 TXNDC2Q86VQ3 553 aa27.1■■□□□ 1.93
PDLIM7-209ENST00000503346 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
PDLIM7-209ENST00000503346 TMEM131LA2VDJ0 1609 aa27.09■■□□□ 1.93
PDLIM7-209ENST00000503346 CHGAP10645 457 aaKnown RBP27.06■■□□□ 1.92
PDLIM7-209ENST00000503346 FOXD1Q16676 465 aa27.04■■□□□ 1.92
PDLIM7-209ENST00000503346 ZFYVE9O95405 1425 aa27.04■■□□□ 1.92
PDLIM7-209ENST00000503346 CLTCL1P53675 1640 aa27.01■■□□□ 1.92
PDLIM7-209ENST00000503346 RIMS2Q9UQ26 1411 aa27.01■■□□□ 1.91
PDLIM7-209ENST00000503346 HDGFP51858 240 aaKnown RBP27.01■■□□□ 1.91
PDLIM7-209ENST00000503346 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
PDLIM7-209ENST00000503346 ZNF335Q9H4Z2 1342 aaPredicted RBP26.99■■□□□ 1.91
PDLIM7-209ENST00000503346 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms