RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 ERBINQ96RT1 1412 aa13.59□□□□□ -0.23
RNF4-203ENST00000503123 MROH1Q8NDA8 1641 aa13.59□□□□□ -0.23
RNF4-203ENST00000503123 ADGRL2O95490 1459 aa13.59□□□□□ -0.23
RNF4-203ENST00000503123 CEP152O94986 1710 aa13.59□□□□□ -0.23
RNF4-203ENST00000503123 ZMYM3Q14202 1370 aa13.58□□□□□ -0.24
RNF4-203ENST00000503123 KIF3BO15066 747 aa13.57□□□□□ -0.24
RNF4-203ENST00000503123 GGT6Q6P531 493 aa13.57□□□□□ -0.24
RNF4-203ENST00000503123 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
RNF4-203ENST00000503123 MYO3AQ8NEV4 1616 aa13.57□□□□□ -0.24
RNF4-203ENST00000503123 KIF15Q9NS87 1388 aa13.57□□□□□ -0.24
RNF4-203ENST00000503123 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
RNF4-203ENST00000503123 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
RNF4-203ENST00000503123 CAMSAP1Q5T5Y3 1602 aa13.56□□□□□ -0.24
RNF4-203ENST00000503123 ANKRD30AQ9BXX3 1397 aa13.56□□□□□ -0.24
RNF4-203ENST00000503123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
RNF4-203ENST00000503123 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
RNF4-203ENST00000503123 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
RNF4-203ENST00000503123 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
RNF4-203ENST00000503123 ABCC3O15438 1527 aa13.54□□□□□ -0.24
RNF4-203ENST00000503123 PZPP20742 1482 aa13.54□□□□□ -0.24
RNF4-203ENST00000503123 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
RNF4-203ENST00000503123 FAM50AQ14320 339 aaKnown RBP13.52□□□□□ -0.25
RNF4-203ENST00000503123 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
RNF4-203ENST00000503123 VWDEQ8N2E2 1590 aa13.51□□□□□ -0.25
RNF4-203ENST00000503123 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
RNF4-203ENST00000503123 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
RNF4-203ENST00000503123 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
RNF4-203ENST00000503123 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
RNF4-203ENST00000503123 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
RNF4-203ENST00000503123 POLR1AO95602 1720 aaPredicted RBP13.48□□□□□ -0.25
RNF4-203ENST00000503123 GCC2Q8IWJ2 1684 aa13.48□□□□□ -0.25
RNF4-203ENST00000503123 UNC13BO14795 1591 aa13.48□□□□□ -0.25
RNF4-203ENST00000503123 HSPA2P54652 639 aa13.47□□□□□ -0.25
RNF4-203ENST00000503123 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
RNF4-203ENST00000503123 LMTK2Q8IWU2 1503 aa13.47□□□□□ -0.25
RNF4-203ENST00000503123 A2ML1A8K2U0 1454 aa13.47□□□□□ -0.25
RNF4-203ENST00000503123 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
RNF4-203ENST00000503123 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
RNF4-203ENST00000503123 TET3O43151 1660 aa13.46□□□□□ -0.26
RNF4-203ENST00000503123 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.26
RNF4-203ENST00000503123 KANK1Q14678 1352 aa13.45□□□□□ -0.26
RNF4-203ENST00000503123 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
RNF4-203ENST00000503123 PLA2R1Q13018 1463 aa13.45□□□□□ -0.26
RNF4-203ENST00000503123 TNRQ92752 1358 aa13.45□□□□□ -0.26
RNF4-203ENST00000503123 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
RNF4-203ENST00000503123 EFCAB6Q5THR3 1501 aa13.44□□□□□ -0.26
RNF4-203ENST00000503123 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
RNF4-203ENST00000503123 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
RNF4-203ENST00000503123 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
RNF4-203ENST00000503123 PTPRTO14522 1441 aa13.41□□□□□ -0.26
RNF4-203ENST00000503123 DMRT2Q9Y5R5 561 aa13.41□□□□□ -0.26
RNF4-203ENST00000503123 RPRD2Q5VT52 1461 aaKnown RBP13.41□□□□□ -0.26
RNF4-203ENST00000503123 FBXO31Q5XUX0 539 aaPredicted RBP13.4□□□□□ -0.26
RNF4-203ENST00000503123 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
RNF4-203ENST00000503123 E9PCH4 1651 aa13.39□□□□□ -0.27
RNF4-203ENST00000503123 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
RNF4-203ENST00000503123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.272e-10■■□□□ 13
RNF4-203ENST00000503123 PIK3C2BO00750 1634 aa13.37□□□□□ -0.27
RNF4-203ENST00000503123 SYNMO15061 1565 aa13.37□□□□□ -0.27
RNF4-203ENST00000503123 PKD2Q13563 968 aa13.36□□□□□ -0.27
RNF4-203ENST00000503123 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
RNF4-203ENST00000503123 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
RNF4-203ENST00000503123 NOS1P29475 1434 aa13.34□□□□□ -0.27
RNF4-203ENST00000503123 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
RNF4-203ENST00000503123 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
RNF4-203ENST00000503123 HFM1A2PYH4 1435 aa13.33□□□□□ -0.28
RNF4-203ENST00000503123 NAIPQ13075 1403 aa13.33□□□□□ -0.28
RNF4-203ENST00000503123 ITGAEP38570 1179 aa13.33□□□□□ -0.28
RNF4-203ENST00000503123 MED14O60244 1454 aa13.32□□□□□ -0.28
RNF4-203ENST00000503123 SLIT1O75093 1534 aa13.32□□□□□ -0.28
RNF4-203ENST00000503123 ARHGAP23Q9P227 1491 aa13.3□□□□□ -0.28
RNF4-203ENST00000503123 ADGRB3O60242 1522 aa13.3□□□□□ -0.28
RNF4-203ENST00000503123 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
RNF4-203ENST00000503123 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
RNF4-203ENST00000503123 NUP155O75694 1391 aa13.29□□□□□ -0.28
RNF4-203ENST00000503123 ANKLE2Q86XL3 938 aa13.28□□□□□ -0.28
RNF4-203ENST00000503123 SLC52A1Q9NWF4 448 aa13.28□□□□□ -0.28
RNF4-203ENST00000503123 TMEM131LA2VDJ0 1609 aa13.28□□□□□ -0.28
RNF4-203ENST00000503123 KIF1BO60333 1816 aa13.27□□□□□ -0.28
RNF4-203ENST00000503123 IQSEC2Q5JU85 1478 aa13.27□□□□□ -0.29
RNF4-203ENST00000503123 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
RNF4-203ENST00000503123 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
RNF4-203ENST00000503123 IDI1Q13907 227 aa13.24□□□□□ -0.29
RNF4-203ENST00000503123 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
RNF4-203ENST00000503123 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
RNF4-203ENST00000503123 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
RNF4-203ENST00000503123 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
RNF4-203ENST00000503123 FBXO41Q8TF61 875 aa13.22□□□□□ -0.29
RNF4-203ENST00000503123 TRPM2O94759 1503 aa13.22□□□□□ -0.29
RNF4-203ENST00000503123 CPS1P31327 1500 aa13.22□□□□□ -0.29
RNF4-203ENST00000503123 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
RNF4-203ENST00000503123 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
RNF4-203ENST00000503123 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
RNF4-203ENST00000503123 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
RNF4-203ENST00000503123 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
RNF4-203ENST00000503123 CHD2O14647 1828 aaKnown RBP13.18□□□□□ -0.3
RNF4-203ENST00000503123 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
RNF4-203ENST00000503123 ZNF335Q9H4Z2 1342 aaPredicted RBP13.18□□□□□ -0.3
RNF4-203ENST00000503123 LTKP29376 864 aa13.18□□□□□ -0.3
RNF4-203ENST00000503123 TXNDC2Q86VQ3 553 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms