RNA–Protein interactions for RNA: ENST00000502830.1

SEC24D-204, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-204ENST00000502830 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
SEC24D-204ENST00000502830 GNPATO15228 680 aa9.06□□□□□ -0.96
SEC24D-204ENST00000502830 MAP2K5Q13163 448 aa9.06□□□□□ -0.96
SEC24D-204ENST00000502830 HIC1Q14526 733 aa9.06□□□□□ -0.96
SEC24D-204ENST00000502830 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
SEC24D-204ENST00000502830 IRF6O14896 467 aa9.05□□□□□ -0.96
SEC24D-204ENST00000502830 C14orf37Q86TY3 774 aa9.04□□□□□ -0.96
SEC24D-204ENST00000502830 ERBB3P21860 1342 aa9.04□□□□□ -0.96
SEC24D-204ENST00000502830 PRIM1P49642 420 aaKnown RBP9.03□□□□□ -0.96
SEC24D-204ENST00000502830 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
SEC24D-204ENST00000502830 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
SEC24D-204ENST00000502830 PTGDRQ13258 359 aa9.02□□□□□ -0.97
SEC24D-204ENST00000502830 ZSWIM6Q9HCJ5 1215 aa9.01□□□□□ -0.97
SEC24D-204ENST00000502830 PHF14O94880 888 aa9□□□□□ -0.97
SEC24D-204ENST00000502830 FECHP22830 423 aa9□□□□□ -0.97
SEC24D-204ENST00000502830 EPAS1Q99814 870 aa9□□□□□ -0.97
SEC24D-204ENST00000502830 AMHR2Q16671 573 aa8.99□□□□□ -0.97
SEC24D-204ENST00000502830 VARS2Q5ST30 1063 aaKnown RBP8.99□□□□□ -0.97
SEC24D-204ENST00000502830 EN1Q05925 392 aaPredicted RBP8.98□□□□□ -0.97
SEC24D-204ENST00000502830 PCDHGA4Q9Y5G9 962 aa8.98□□□□□ -0.97
SEC24D-204ENST00000502830 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
SEC24D-204ENST00000502830 PCDHGA10Q9Y5H3 936 aa8.96□□□□□ -0.98
SEC24D-204ENST00000502830 MAP3K7O43318 606 aa8.95□□□□□ -0.98
SEC24D-204ENST00000502830 PARP9Q8IXQ6 854 aa8.95□□□□□ -0.98
SEC24D-204ENST00000502830 FAM117AQ9C073 453 aa8.95□□□□□ -0.98
SEC24D-204ENST00000502830 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
SEC24D-204ENST00000502830 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
SEC24D-204ENST00000502830 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
SEC24D-204ENST00000502830 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
SEC24D-204ENST00000502830 FBXW7Q969H0 707 aa8.93□□□□□ -0.98
SEC24D-204ENST00000502830 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
SEC24D-204ENST00000502830 DDRGK1Q96HY6 314 aa8.93□□□□□ -0.98
SEC24D-204ENST00000502830 ZNF687Q8N1G0 1237 aa8.92□□□□□ -0.98
SEC24D-204ENST00000502830 JPH4Q96JJ6 628 aa8.92□□□□□ -0.98
SEC24D-204ENST00000502830 ARSIQ5FYB1 569 aa8.91□□□□□ -0.98
SEC24D-204ENST00000502830 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
SEC24D-204ENST00000502830 TTLL12Q14166 644 aaPredicted RBP8.9□□□□□ -0.98
SEC24D-204ENST00000502830 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
SEC24D-204ENST00000502830 FOSBP53539 338 aa8.89□□□□□ -0.99
SEC24D-204ENST00000502830 KHSRPQ92945 711 aaKnown RBP eCLIP8.88□□□□□ -0.99
SEC24D-204ENST00000502830 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
SEC24D-204ENST00000502830 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
SEC24D-204ENST00000502830 CERKQ8TCT0 537 aa8.87□□□□□ -0.99
SEC24D-204ENST00000502830 C6orf132Q5T0Z8 1188 aa8.86□□□□□ -0.99
SEC24D-204ENST00000502830 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
SEC24D-204ENST00000502830 CLCN1P35523 988 aa8.85□□□□□ -0.99
SEC24D-204ENST00000502830 ZNF454Q8N9F8 522 aa8.85□□□□□ -0.99
SEC24D-204ENST00000502830 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
SEC24D-204ENST00000502830 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
SEC24D-204ENST00000502830 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
SEC24D-204ENST00000502830 MYT1LQ9UL68 1186 aa8.85□□□□□ -0.99
SEC24D-204ENST00000502830 NUDT7P0C024 238 aa8.84□□□□□ -0.99
SEC24D-204ENST00000502830 OATP04181 439 aa8.83□□□□□ -1
SEC24D-204ENST00000502830 MS4A1P11836 297 aa8.83□□□□□ -1
SEC24D-204ENST00000502830 GPCPD1Q9NPB8 672 aa8.83□□□□□ -1
SEC24D-204ENST00000502830 PHOX2BQ99453 314 aa8.82□□□□□ -1
SEC24D-204ENST00000502830 MDM2Q00987 491 aaPredicted RBP8.81□□□□□ -1
SEC24D-204ENST00000502830 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
SEC24D-204ENST00000502830 PADI6Q6TGC4 694 aa8.8□□□□□ -1
SEC24D-204ENST00000502830 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
SEC24D-204ENST00000502830 TTC13Q8NBP0 860 aa8.8□□□□□ -1
SEC24D-204ENST00000502830 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
SEC24D-204ENST00000502830 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
SEC24D-204ENST00000502830 FAM161AQ3B820 660 aa8.79□□□□□ -1
SEC24D-204ENST00000502830 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
SEC24D-204ENST00000502830 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
SEC24D-204ENST00000502830 ANKRD13DQ6ZTN6 518 aa8.78□□□□□ -1
SEC24D-204ENST00000502830 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
SEC24D-204ENST00000502830 PRSS12P56730 875 aa8.77□□□□□ -1.01
SEC24D-204ENST00000502830 PCMTD1Q96MG8 357 aaPredicted RBP8.77□□□□□ -1.01
SEC24D-204ENST00000502830 ARXQ96QS3 562 aa8.77□□□□□ -1.01
SEC24D-204ENST00000502830 ZMYND15Q9H091 742 aa8.77□□□□□ -1.01
SEC24D-204ENST00000502830 LHX6Q9UPM6 363 aa8.77□□□□□ -1.01
SEC24D-204ENST00000502830 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
SEC24D-204ENST00000502830 SUPT5HO00267 1087 aaKnown RBP8.76□□□□□ -1.01
SEC24D-204ENST00000502830 CDCA7LQ96GN5 454 aa8.76□□□□□ -1.01
SEC24D-204ENST00000502830 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
SEC24D-204ENST00000502830 SH3D19Q5HYK7 790 aa8.75□□□□□ -1.01
SEC24D-204ENST00000502830 PPP4R3BQ5MIZ7 849 aa8.75□□□□□ -1.01
SEC24D-204ENST00000502830 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
SEC24D-204ENST00000502830 PBX2P40425 430 aa8.74□□□□□ -1.01
SEC24D-204ENST00000502830 RBM46Q8TBY0 533 aaKnown RBP8.74□□□□□ -1.01
SEC24D-204ENST00000502830 BEGAINQ9BUH8 593 aa8.74□□□□□ -1.01
SEC24D-204ENST00000502830 FLIIQ13045 1269 aa8.73□□□□□ -1.01
SEC24D-204ENST00000502830 POTEEQ6S8J3 1075 aa8.73□□□□□ -1.01
SEC24D-204ENST00000502830 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
SEC24D-204ENST00000502830 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
SEC24D-204ENST00000502830 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
SEC24D-204ENST00000502830 COL9A1P20849 921 aa8.71□□□□□ -1.02
SEC24D-204ENST00000502830 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
SEC24D-204ENST00000502830 PTPREP23469 700 aa8.7□□□□□ -1.02
SEC24D-204ENST00000502830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
SEC24D-204ENST00000502830 PPP1R3GB7ZBB8 358 aa8.69□□□□□ -1.02
SEC24D-204ENST00000502830 EYA1Q99502 592 aa8.69□□□□□ -1.02
SEC24D-204ENST00000502830 FAM198AQ9UFP1 575 aa8.69□□□□□ -1.02
SEC24D-204ENST00000502830 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
SEC24D-204ENST00000502830 ONECUT3O60422 494 aaPredicted RBP8.67□□□□□ -1.02
SEC24D-204ENST00000502830 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
SEC24D-204ENST00000502830 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
SEC24D-204ENST00000502830 POLR3EQ9NVU0 708 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms