RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
HTT-202ENST00000502820 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
HTT-202ENST00000502820 TXNDC2Q86VQ3 553 aa8.25□□□□□ -1.09
HTT-202ENST00000502820 VWDEQ8N2E2 1590 aa8.25□□□□□ -1.09
HTT-202ENST00000502820 ABCC1P33527 1531 aa8.24□□□□□ -1.09
HTT-202ENST00000502820 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
HTT-202ENST00000502820 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
HTT-202ENST00000502820 STAG3Q9UJ98 1225 aa8.24□□□□□ -1.09
HTT-202ENST00000502820 NEURL4Q96JN8 1562 aa8.23□□□□□ -1.09
HTT-202ENST00000502820 ZRANB1Q9UGI0 708 aa8.23□□□□□ -1.09
HTT-202ENST00000502820 MROH2AA6NES4 1674 aa8.23□□□□□ -1.09
HTT-202ENST00000502820 ZNF142P52746 1687 aaPredicted RBP8.23□□□□□ -1.09
HTT-202ENST00000502820 SAMD9LQ8IVG5 1584 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 UGGT1Q9NYU2 1555 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 KIDINS220Q9ULH0 1771 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 MYT1Q01538 1121 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 EID1Q9Y6B2 187 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 SYCP2Q9BX26 1530 aa8.22□□□□□ -1.09
HTT-202ENST00000502820 MIA2Q96PC5 1412 aa8.21□□□□□ -1.09
HTT-202ENST00000502820 SLC26A8Q96RN1 970 aa8.21□□□□□ -1.1
HTT-202ENST00000502820 ZNF644Q9H582 1327 aaPredicted RBP8.21□□□□□ -1.1
HTT-202ENST00000502820 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.1
HTT-202ENST00000502820 TMEM94Q12767 1356 aa8.21□□□□□ -1.1
HTT-202ENST00000502820 JCADQ9P266 1359 aa8.21□□□□□ -1.1
HTT-202ENST00000502820 FAM135BQ49AJ0 1406 aa8.2□□□□□ -1.1
HTT-202ENST00000502820 ATP7AQ04656 1500 aa8.2□□□□□ -1.1
HTT-202ENST00000502820 FOXD1Q16676 465 aa8.2□□□□□ -1.1
HTT-202ENST00000502820 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
HTT-202ENST00000502820 LTKP29376 864 aa8.19□□□□□ -1.1
HTT-202ENST00000502820 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
HTT-202ENST00000502820 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
HTT-202ENST00000502820 SRCAPQ6ZRS2 3230 aa8.18□□□□□ -1.1
HTT-202ENST00000502820 POLR1AO95602 1720 aaPredicted RBP8.18□□□□□ -1.1
HTT-202ENST00000502820 CDC42BPBQ9Y5S2 1711 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 C8orf37Q96NL8 207 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 MED14O60244 1454 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 NLRP1Q9C000 1473 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 ARHGAP35Q9NRY4 1499 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 PREX2Q70Z35 1606 aa8.17□□□□□ -1.1
HTT-202ENST00000502820 PZPP20742 1482 aa8.16□□□□□ -1.1
HTT-202ENST00000502820 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
HTT-202ENST00000502820 AFF2P51816 1311 aa8.16□□□□□ -1.1
HTT-202ENST00000502820 MSH6P52701 1360 aa8.16□□□□□ -1.1
HTT-202ENST00000502820 DHX29Q7Z478 1369 aaKnown RBP8.16□□□□□ -1.1
HTT-202ENST00000502820 QTRT2Q9H974 415 aaKnown RBP8.16□□□□□ -1.1
HTT-202ENST00000502820 SPATA31A6Q5VVP1 1343 aa8.15□□□□□ -1.1
HTT-202ENST00000502820 KCNA6P17658 529 aa8.15□□□□□ -1.1
HTT-202ENST00000502820 GPATCH8Q9UKJ3 1502 aaKnown RBP8.14□□□□□ -1.11
HTT-202ENST00000502820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.14□□□□□ -1.11
HTT-202ENST00000502820 SYNMO15061 1565 aa8.14□□□□□ -1.11
HTT-202ENST00000502820 KDM5DQ9BY66 1539 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 CCDC18Q5T9S5 1454 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
HTT-202ENST00000502820 STRCP1A6NGW2 1772 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 TSPY4P0CV99 314 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 TSPY10P0CW01 314 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 HRCP23327 699 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 ROBO1Q9Y6N7 1651 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 LRP6O75581 1613 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 PLXNC1O60486 1568 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 PLEKHH2Q8IVE3 1493 aa8.13□□□□□ -1.11
HTT-202ENST00000502820 KIAA1107Q9UPP5 1409 aa8.12□□□□□ -1.11
HTT-202ENST00000502820 ATF3P18847 181 aa8.12□□□□□ -1.11
HTT-202ENST00000502820 RBM6P78332 1123 aaKnown RBP8.12□□□□□ -1.11
HTT-202ENST00000502820 NGLY1Q96IV0 654 aa8.12□□□□□ -1.11
HTT-202ENST00000502820 MTUS2Q5JR59 1369 aa8.11□□□□□ -1.11
HTT-202ENST00000502820 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
HTT-202ENST00000502820 PPP1R15AO75807 674 aaPredicted RBP8.1□□□□□ -1.11
HTT-202ENST00000502820 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
HTT-202ENST00000502820 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
HTT-202ENST00000502820 RGS12O14924 1447 aa8.09□□□□□ -1.11
HTT-202ENST00000502820 SETBP1Q9Y6X0 1596 aa8.09□□□□□ -1.11
HTT-202ENST00000502820 PHLPP1O60346 1717 aa8.09□□□□□ -1.11
HTT-202ENST00000502820 LRRC9Q6ZRR7 1453 aa8.08□□□□□ -1.12
HTT-202ENST00000502820 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
HTT-202ENST00000502820 CDC42BPAQ5VT25 1732 aa8.08□□□□□ -1.12
HTT-202ENST00000502820 CHGAP10645 457 aaKnown RBP8.07□□□□□ -1.12
HTT-202ENST00000502820 DDX17Q92841 729 aaKnown RBP8.07□□□□□ -1.12
HTT-202ENST00000502820 ERVK-7P63135 1459 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 NCOA2Q15596 1464 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 RTEL1-TNFRSF6BF6WH68 1400 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 ADGBQ8N7X0 1667 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
HTT-202ENST00000502820 CADPS2Q86UW7 1296 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 POTEDQ86YR6 584 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 USP21Q9UK80 565 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 TMEM2Q9UHN6 1383 aa8.06□□□□□ -1.12
HTT-202ENST00000502820 SF3B2Q13435 895 aaKnown RBP8.05□□□□□ -1.12
HTT-202ENST00000502820 FYCO1Q9BQS8 1478 aa8.05□□□□□ -1.12
HTT-202ENST00000502820 FGD6Q6ZV73 1430 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 LRRIQ1Q96JM4 1722 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 IDI1Q13907 227 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 BRINP3Q76B58 766 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 CDK12Q9NYV4 1490 aaPredicted RBP8.04□□□□□ -1.12
HTT-202ENST00000502820 MBD5Q9P267 1494 aa8.04□□□□□ -1.12
HTT-202ENST00000502820 PRDM15P57071 1507 aaPredicted RBP8.03□□□□□ -1.12
HTT-202ENST00000502820 MAP3K1Q13233 1512 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms