RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 RNF17Q9BXT8 1623 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-212ENST00000502563 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-212ENST00000502563 MROH2AA6NES4 1674 aa16.42■□□□□ 0.22
UBE2D3-212ENST00000502563 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
UBE2D3-212ENST00000502563 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
UBE2D3-212ENST00000502563 RIMS1Q86UR5 1692 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-212ENST00000502563 DEPDC5O75140 1603 aa16.38■□□□□ 0.21
UBE2D3-212ENST00000502563 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
UBE2D3-212ENST00000502563 ZC3H13Q5T200 1668 aaKnown RBP16.37■□□□□ 0.21
UBE2D3-212ENST00000502563 KIF3BO15066 747 aa16.36■□□□□ 0.21
UBE2D3-212ENST00000502563 MAPK8IP2Q13387 824 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-212ENST00000502563 PPARGC1BQ86YN6 1023 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-212ENST00000502563 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
UBE2D3-212ENST00000502563 NPATQ14207 1427 aa16.35■□□□□ 0.21
UBE2D3-212ENST00000502563 ANKRD50Q9ULJ7 1429 aa16.35■□□□□ 0.21
UBE2D3-212ENST00000502563 MLECQ14165 292 aa16.34■□□□□ 0.21
UBE2D3-212ENST00000502563 ESF1Q9H501 851 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-212ENST00000502563 RRP7BPQ9NSQ0 103 aa16.33■□□□□ 0.2
UBE2D3-212ENST00000502563 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
UBE2D3-212ENST00000502563 C3P01024 1663 aa16.32■□□□□ 0.2
UBE2D3-212ENST00000502563 ZMYM3Q14202 1370 aa16.32■□□□□ 0.2
UBE2D3-212ENST00000502563 LMTK2Q8IWU2 1503 aa16.32■□□□□ 0.2
UBE2D3-212ENST00000502563 SETD1BQ9UPS6 1966 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-212ENST00000502563 GGT6Q6P531 493 aa16.31■□□□□ 0.2
UBE2D3-212ENST00000502563 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
UBE2D3-212ENST00000502563 ABCC3O15438 1527 aa16.3■□□□□ 0.2
UBE2D3-212ENST00000502563 ARHGAP31Q2M1Z3 1444 aa16.3■□□□□ 0.2
UBE2D3-212ENST00000502563 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
UBE2D3-212ENST00000502563 PZPP20742 1482 aa16.29■□□□□ 0.2
UBE2D3-212ENST00000502563 HFM1A2PYH4 1435 aa16.29■□□□□ 0.2
UBE2D3-212ENST00000502563 UNC13BO14795 1591 aa16.28■□□□□ 0.2
UBE2D3-212ENST00000502563 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
UBE2D3-212ENST00000502563 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.19
UBE2D3-212ENST00000502563 KANK1Q14678 1352 aa16.26■□□□□ 0.19
UBE2D3-212ENST00000502563 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
UBE2D3-212ENST00000502563 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
UBE2D3-212ENST00000502563 NAIPQ13075 1403 aa16.26■□□□□ 0.19
UBE2D3-212ENST00000502563 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
UBE2D3-212ENST00000502563 RPRD2Q5VT52 1461 aaKnown RBP16.23■□□□□ 0.19
UBE2D3-212ENST00000502563 LMTK3Q96Q04 1460 aa16.23■□□□□ 0.19
UBE2D3-212ENST00000502563 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
UBE2D3-212ENST00000502563 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
UBE2D3-212ENST00000502563 IQGAP3Q86VI3 1631 aa16.21■□□□□ 0.19
UBE2D3-212ENST00000502563 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
UBE2D3-212ENST00000502563 EFCAB6Q5THR3 1501 aa16.2■□□□□ 0.18
UBE2D3-212ENST00000502563 ZNF142P52746 1687 aaPredicted RBP16.2■□□□□ 0.18
UBE2D3-212ENST00000502563 CEP152O94986 1710 aa16.19■□□□□ 0.18
UBE2D3-212ENST00000502563 TET3O43151 1660 aa16.19■□□□□ 0.18
UBE2D3-212ENST00000502563 ITGAEP38570 1179 aa16.19■□□□□ 0.18
UBE2D3-212ENST00000502563 CEBPAP49715 358 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-212ENST00000502563 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
UBE2D3-212ENST00000502563 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
UBE2D3-212ENST00000502563 MYO3AQ8NEV4 1616 aa16.16■□□□□ 0.18
UBE2D3-212ENST00000502563 TNRQ92752 1358 aa16.15■□□□□ 0.18
UBE2D3-212ENST00000502563 NOS1P29475 1434 aa16.15■□□□□ 0.18
UBE2D3-212ENST00000502563 A2ML1A8K2U0 1454 aa16.14■□□□□ 0.17
UBE2D3-212ENST00000502563 CEP170BQ9Y4F5 1589 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-212ENST00000502563 HRCP23327 699 aa16.13■□□□□ 0.17
UBE2D3-212ENST00000502563 PLA2R1Q13018 1463 aa16.13■□□□□ 0.17
UBE2D3-212ENST00000502563 NUP155O75694 1391 aa16.13■□□□□ 0.17
UBE2D3-212ENST00000502563 KDM5AP29375 1690 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-212ENST00000502563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
UBE2D3-212ENST00000502563 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
UBE2D3-212ENST00000502563 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-212ENST00000502563 E9PCH4 1651 aa16.08■□□□□ 0.17
UBE2D3-212ENST00000502563 SLC52A1Q9NWF4 448 aa16.08■□□□□ 0.16
UBE2D3-212ENST00000502563 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
UBE2D3-212ENST00000502563 PTPRTO14522 1441 aa16.07■□□□□ 0.16
UBE2D3-212ENST00000502563 SYNMO15061 1565 aa16.06■□□□□ 0.16
UBE2D3-212ENST00000502563 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
UBE2D3-212ENST00000502563 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
UBE2D3-212ENST00000502563 PKD2Q13563 968 aa16.03■□□□□ 0.16
UBE2D3-212ENST00000502563 THEMISQ8N1K5 641 aaPredicted RBP16.03■□□□□ 0.16
UBE2D3-212ENST00000502563 SLIT1O75093 1534 aa16.02■□□□□ 0.15
UBE2D3-212ENST00000502563 ARHGAP23Q9P227 1491 aa16.02■□□□□ 0.15
UBE2D3-212ENST00000502563 UBR1Q8IWV7 1749 aa16.02■□□□□ 0.15
UBE2D3-212ENST00000502563 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
UBE2D3-212ENST00000502563 STRCQ7RTU9 1775 aa16.01■□□□□ 0.15
UBE2D3-212ENST00000502563 TRPM2O94759 1503 aa16■□□□□ 0.15
UBE2D3-212ENST00000502563 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
UBE2D3-212ENST00000502563 ADGRB3O60242 1522 aa15.99■□□□□ 0.15
UBE2D3-212ENST00000502563 MED14O60244 1454 aa15.99■□□□□ 0.15
UBE2D3-212ENST00000502563 HSPA2P54652 639 aa15.99■□□□□ 0.15
UBE2D3-212ENST00000502563 CFAP65Q6ZU64 1925 aaKnown RBP15.99■□□□□ 0.15
UBE2D3-212ENST00000502563 IDI1Q13907 227 aa15.98■□□□□ 0.15
UBE2D3-212ENST00000502563 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-212ENST00000502563 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
UBE2D3-212ENST00000502563 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
UBE2D3-212ENST00000502563 POLR1AO95602 1720 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-212ENST00000502563 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
UBE2D3-212ENST00000502563 NEURL4Q96JN8 1562 aa15.95■□□□□ 0.14
UBE2D3-212ENST00000502563 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
UBE2D3-212ENST00000502563 MPHOSPH9Q99550 1183 aa15.94■□□□□ 0.14
UBE2D3-212ENST00000502563 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
UBE2D3-212ENST00000502563 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
UBE2D3-212ENST00000502563 ZFYVE9O95405 1425 aa15.91■□□□□ 0.14
UBE2D3-212ENST00000502563 CLTCL1P53675 1640 aa15.9■□□□□ 0.14
UBE2D3-212ENST00000502563 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
UBE2D3-212ENST00000502563 STAG3Q9UJ98 1225 aa15.89■□□□□ 0.13
UBE2D3-212ENST00000502563 NPHP4O75161 1426 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms