RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 MROH1Q8NDA8 1641 aa29.18■■■□□ 2.26
LINC01550-201ENST00000499006 KIF3BO15066 747 aa29.16■■■□□ 2.26
LINC01550-201ENST00000499006 PRDM15P57071 1507 aaPredicted RBP29.14■■■□□ 2.26
LINC01550-201ENST00000499006 ACIN1Q9UKV3 1341 aaKnown RBP29.11■■■□□ 2.25
LINC01550-201ENST00000499006 KDM5DQ9BY66 1539 aa29.11■■■□□ 2.25
LINC01550-201ENST00000499006 VWDEQ8N2E2 1590 aa29.1■■■□□ 2.25
LINC01550-201ENST00000499006 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
LINC01550-201ENST00000499006 CEP152O94986 1710 aa29.04■■■□□ 2.24
LINC01550-201ENST00000499006 ZC3H13Q5T200 1668 aaKnown RBP29.03■■■□□ 2.24
LINC01550-201ENST00000499006 GGT6Q6P531 493 aa29.03■■■□□ 2.24
LINC01550-201ENST00000499006 NUP155O75694 1391 aa29.02■■■□□ 2.24
LINC01550-201ENST00000499006 ARID4BQ4LE39 1312 aaPredicted RBP29.02■■■□□ 2.24
LINC01550-201ENST00000499006 TRIM52Q96A61 297 aa29.02■■■□□ 2.24
LINC01550-201ENST00000499006 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
LINC01550-201ENST00000499006 PZPP20742 1482 aa29.01■■■□□ 2.24
LINC01550-201ENST00000499006 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.01■■■□□ 2.23
LINC01550-201ENST00000499006 KANK1Q14678 1352 aa28.98■■■□□ 2.23
LINC01550-201ENST00000499006 LMTK2Q8IWU2 1503 aa28.98■■■□□ 2.23
LINC01550-201ENST00000499006 TET3O43151 1660 aa28.98■■■□□ 2.23
LINC01550-201ENST00000499006 PPP6R1Q9UPN7 881 aa28.97■■■□□ 2.23
LINC01550-201ENST00000499006 ABCC3O15438 1527 aa28.97■■■□□ 2.23
LINC01550-201ENST00000499006 CLTCQ00610 1675 aaKnown RBP28.96■■■□□ 2.23
LINC01550-201ENST00000499006 FER1L4A9Z1Z3 1794 aa28.95■■■□□ 2.23
LINC01550-201ENST00000499006 MLECQ14165 292 aa28.95■■■□□ 2.22
LINC01550-201ENST00000499006 ADAMTSL3P82987 1691 aa28.94■■■□□ 2.22
LINC01550-201ENST00000499006 CAMSAP1Q5T5Y3 1602 aa28.93■■■□□ 2.22
LINC01550-201ENST00000499006 MPHOSPH9Q99550 1183 aa28.91■■■□□ 2.22
LINC01550-201ENST00000499006 E9PCH4 1651 aa28.91■■■□□ 2.22
LINC01550-201ENST00000499006 DHX57Q6P158 1386 aaKnown RBP28.91■■■□□ 2.22
LINC01550-201ENST00000499006 WASHC2CQ9Y4E1 1318 aa28.9■■■□□ 2.22
LINC01550-201ENST00000499006 EFCAB6Q5THR3 1501 aa28.9■■■□□ 2.22
LINC01550-201ENST00000499006 MROH2AA6NES4 1674 aa28.9■■■□□ 2.22
LINC01550-201ENST00000499006 SLC4A1APQ9BWU0 796 aaKnown RBP28.89■■■□□ 2.22
LINC01550-201ENST00000499006 MADDQ8WXG6 1647 aa28.87■■■□□ 2.21
LINC01550-201ENST00000499006 CFAP65Q6ZU64 1925 aaKnown RBP28.86■■■□□ 2.21
LINC01550-201ENST00000499006 CNTLNQ9NXG0 1405 aa28.84■■■□□ 2.21
LINC01550-201ENST00000499006 ARHGAP31Q2M1Z3 1444 aa28.83■■■□□ 2.2
LINC01550-201ENST00000499006 RIMS1Q86UR5 1692 aaKnown RBP28.81■■■□□ 2.2
LINC01550-201ENST00000499006 PKD2Q13563 968 aa28.81■■■□□ 2.2
LINC01550-201ENST00000499006 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
LINC01550-201ENST00000499006 NPATQ14207 1427 aa28.79■■■□□ 2.2
LINC01550-201ENST00000499006 C3P01024 1663 aa28.79■■■□□ 2.2
LINC01550-201ENST00000499006 ESF1Q9H501 851 aaKnown RBP28.78■■■□□ 2.2
LINC01550-201ENST00000499006 SPHKAPQ2M3C7 1700 aa28.78■■■□□ 2.2
LINC01550-201ENST00000499006 PREX1Q8TCU6 1659 aa28.76■■■□□ 2.19
LINC01550-201ENST00000499006 ZMYM3Q14202 1370 aa28.76■■■□□ 2.19
LINC01550-201ENST00000499006 FOXD1Q16676 465 aa28.75■■■□□ 2.19
LINC01550-201ENST00000499006 PTPRTO14522 1441 aa28.7■■■□□ 2.19
LINC01550-201ENST00000499006 ANKRD30BQ9BXX2 1392 aa28.7■■■□□ 2.18
LINC01550-201ENST00000499006 PLA2R1Q13018 1463 aa28.69■■■□□ 2.18
LINC01550-201ENST00000499006 NOS1P29475 1434 aa28.69■■■□□ 2.18
LINC01550-201ENST00000499006 SPATA31D1Q6ZQQ2 1576 aa28.68■■■□□ 2.18
LINC01550-201ENST00000499006 TRPM2O94759 1503 aa28.68■■■□□ 2.18
LINC01550-201ENST00000499006 CCER1Q8TC90 406 aaPredicted RBP28.67■■■□□ 2.18
LINC01550-201ENST00000499006 ERVK-7P63135 1459 aa28.67■■■□□ 2.18
LINC01550-201ENST00000499006 SYNMO15061 1565 aa28.66■■■□□ 2.18
LINC01550-201ENST00000499006 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
LINC01550-201ENST00000499006 KDM4FA0A1W2PPD8 638 aa28.64■■■□□ 2.17
LINC01550-201ENST00000499006 PTPRMP28827 1452 aa28.63■■■□□ 2.17
LINC01550-201ENST00000499006 FBXO31Q5XUX0 539 aaPredicted RBP28.63■■■□□ 2.17
LINC01550-201ENST00000499006 PIK3C2BO00750 1634 aa28.62■■■□□ 2.17
LINC01550-201ENST00000499006 CEBPAP49715 358 aaPredicted RBP28.61■■■□□ 2.17
LINC01550-201ENST00000499006 CLTCL1P53675 1640 aa28.6■■■□□ 2.17
LINC01550-201ENST00000499006 SETD1BQ9UPS6 1966 aaKnown RBP28.58■■■□□ 2.17
LINC01550-201ENST00000499006 UGGT1Q9NYU2 1555 aa28.57■■■□□ 2.16
LINC01550-201ENST00000499006 KIF1BO60333 1816 aa28.56■■■□□ 2.16
LINC01550-201ENST00000499006 CCDC144AA2RUR9 1427 aa28.54■■■□□ 2.16
LINC01550-201ENST00000499006 TNRQ92752 1358 aa28.52■■■□□ 2.16
LINC01550-201ENST00000499006 SIN3AQ96ST3 1273 aa28.52■■■□□ 2.16
LINC01550-201ENST00000499006 MYO3AQ8NEV4 1616 aa28.49■■■□□ 2.15
LINC01550-201ENST00000499006 MYO5BQ9ULV0 1848 aa28.49■■■□□ 2.15
LINC01550-201ENST00000499006 SLC52A1Q9NWF4 448 aa28.49■■■□□ 2.15
LINC01550-201ENST00000499006 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
LINC01550-201ENST00000499006 KDM5AP29375 1690 aaKnown RBP28.46■■■□□ 2.15
LINC01550-201ENST00000499006 NEURL4Q96JN8 1562 aa28.46■■■□□ 2.15
LINC01550-201ENST00000499006 IDI1Q13907 227 aa28.46■■■□□ 2.15
LINC01550-201ENST00000499006 NLRP1Q9C000 1473 aa28.45■■■□□ 2.15
LINC01550-201ENST00000499006 TMEM131LA2VDJ0 1609 aa28.45■■■□□ 2.15
LINC01550-201ENST00000499006 ZNF142P52746 1687 aaPredicted RBP28.43■■■□□ 2.14
LINC01550-201ENST00000499006 UBR1Q8IWV7 1749 aa28.43■■■□□ 2.14
LINC01550-201ENST00000499006 ADGRB3O60242 1522 aa28.42■■■□□ 2.14
LINC01550-201ENST00000499006 NEUROD1Q13562 356 aa28.42■■■□□ 2.14
LINC01550-201ENST00000499006 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
LINC01550-201ENST00000499006 CEP170BQ9Y4F5 1589 aaPredicted RBP28.38■■■□□ 2.13
LINC01550-201ENST00000499006 A2ML1A8K2U0 1454 aa28.36■■■□□ 2.13
LINC01550-201ENST00000499006 IFT172Q9UG01 1749 aa28.35■■■□□ 2.13
LINC01550-201ENST00000499006 PPLO60437 1756 aa28.32■■■□□ 2.12
LINC01550-201ENST00000499006 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
LINC01550-201ENST00000499006 CHGAP10645 457 aaKnown RBP28.29■■■□□ 2.12
LINC01550-201ENST00000499006 TONSLQ96HA7 1378 aa28.29■■■□□ 2.12
LINC01550-201ENST00000499006 RGL3Q3MIN7 710 aa28.28■■■□□ 2.12
LINC01550-201ENST00000499006 TIMELESSQ9UNS1 1208 aa28.28■■■□□ 2.12
LINC01550-201ENST00000499006 STAG3Q9UJ98 1225 aa28.27■■■□□ 2.12
LINC01550-201ENST00000499006 NEXMIFQ5QGS0 1516 aa28.26■■■□□ 2.12
LINC01550-201ENST00000499006 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
LINC01550-201ENST00000499006 RPGRIP1LQ68CZ1 1315 aa28.22■■■□□ 2.11
LINC01550-201ENST00000499006 SLIT1O75093 1534 aa28.22■■■□□ 2.11
LINC01550-201ENST00000499006 ZNF326Q5BKZ1 582 aaKnown RBP28.21■■■□□ 2.11
LINC01550-201ENST00000499006 ARHGAP23Q9P227 1491 aa28.21■■■□□ 2.11
LINC01550-201ENST00000499006 ZFYVE9O95405 1425 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms