RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-228ENST00000498814 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
CPNE1-228ENST00000498814 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
CPNE1-228ENST00000498814 FAM135AQ9P2D6 1515 aa23.59■■□□□ 1.37
CPNE1-228ENST00000498814 MROH2AA6NES4 1674 aa23.59■■□□□ 1.37
CPNE1-228ENST00000498814 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
CPNE1-228ENST00000498814 CLTCQ00610 1675 aaKnown RBP23.58■■□□□ 1.37
CPNE1-228ENST00000498814 MROH1Q8NDA8 1641 aa23.58■■□□□ 1.36
CPNE1-228ENST00000498814 DEPDC5O75140 1603 aa23.57■■□□□ 1.36
CPNE1-228ENST00000498814 C3P01024 1663 aa23.54■■□□□ 1.36
CPNE1-228ENST00000498814 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
CPNE1-228ENST00000498814 PRDM15P57071 1507 aaPredicted RBP23.54■■□□□ 1.36
CPNE1-228ENST00000498814 ZC3H13Q5T200 1668 aaKnown RBP23.53■■□□□ 1.36
CPNE1-228ENST00000498814 GCC2Q8IWJ2 1684 aa23.52■■□□□ 1.36
CPNE1-228ENST00000498814 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
CPNE1-228ENST00000498814 ZMYM3Q14202 1370 aa23.51■■□□□ 1.35
CPNE1-228ENST00000498814 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
CPNE1-228ENST00000498814 NAIPQ13075 1403 aa23.49■■□□□ 1.35
CPNE1-228ENST00000498814 ABCC3O15438 1527 aa23.49■■□□□ 1.35
CPNE1-228ENST00000498814 CEP152O94986 1710 aa23.48■■□□□ 1.35
CPNE1-228ENST00000498814 CEBPAP49715 358 aaPredicted RBP23.48■■□□□ 1.35
CPNE1-228ENST00000498814 UNC13BO14795 1591 aa23.47■■□□□ 1.35
CPNE1-228ENST00000498814 VWDEQ8N2E2 1590 aa23.47■■□□□ 1.35
CPNE1-228ENST00000498814 KANK1Q14678 1352 aa23.46■■□□□ 1.35
CPNE1-228ENST00000498814 SETD1BQ9UPS6 1966 aaKnown RBP23.46■■□□□ 1.35
CPNE1-228ENST00000498814 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
CPNE1-228ENST00000498814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
CPNE1-228ENST00000498814 CAMSAP1Q5T5Y3 1602 aa23.44■■□□□ 1.34
CPNE1-228ENST00000498814 LMTK2Q8IWU2 1503 aa23.42■■□□□ 1.34
CPNE1-228ENST00000498814 PZPP20742 1482 aa23.41■■□□□ 1.34
CPNE1-228ENST00000498814 NPATQ14207 1427 aa23.41■■□□□ 1.34
CPNE1-228ENST00000498814 PREX1Q8TCU6 1659 aa23.38■■□□□ 1.33
CPNE1-228ENST00000498814 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
CPNE1-228ENST00000498814 ARHGAP31Q2M1Z3 1444 aa23.37■■□□□ 1.33
CPNE1-228ENST00000498814 CFAP65Q6ZU64 1925 aaKnown RBP23.35■■□□□ 1.33
CPNE1-228ENST00000498814 TET3O43151 1660 aa23.35■■□□□ 1.33
CPNE1-228ENST00000498814 NUP155O75694 1391 aa23.34■■□□□ 1.33
CPNE1-228ENST00000498814 EFCAB6Q5THR3 1501 aa23.33■■□□□ 1.33
CPNE1-228ENST00000498814 FBXO31Q5XUX0 539 aaPredicted RBP23.32■■□□□ 1.32
CPNE1-228ENST00000498814 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
CPNE1-228ENST00000498814 SPATA31D1Q6ZQQ2 1576 aa23.31■■□□□ 1.32
CPNE1-228ENST00000498814 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
CPNE1-228ENST00000498814 UHRF1BP1Q6BDS2 1440 aa23.29■■□□□ 1.32
CPNE1-228ENST00000498814 ERVK-7P63135 1459 aa23.29■■□□□ 1.32
CPNE1-228ENST00000498814 MYO3AQ8NEV4 1616 aa23.28■■□□□ 1.32
CPNE1-228ENST00000498814 RPRD2Q5VT52 1461 aaKnown RBP23.28■■□□□ 1.32
CPNE1-228ENST00000498814 TNRQ92752 1358 aa23.27■■□□□ 1.32
CPNE1-228ENST00000498814 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
CPNE1-228ENST00000498814 E9PCH4 1651 aa23.26■■□□□ 1.31
CPNE1-228ENST00000498814 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-228ENST00000498814 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
CPNE1-228ENST00000498814 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
CPNE1-228ENST00000498814 NOS1P29475 1434 aa23.22■■□□□ 1.31
CPNE1-228ENST00000498814 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-228ENST00000498814 NLRP1Q9C000 1473 aa23.21■■□□□ 1.31
CPNE1-228ENST00000498814 CEP170BQ9Y4F5 1589 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-228ENST00000498814 A2ML1A8K2U0 1454 aa23.2■■□□□ 1.3
CPNE1-228ENST00000498814 HRCP23327 699 aa23.19■■□□□ 1.3
CPNE1-228ENST00000498814 SYNMO15061 1565 aa23.18■■□□□ 1.3
CPNE1-228ENST00000498814 HSPA2P54652 639 aa23.16■■□□□ 1.3
CPNE1-228ENST00000498814 SLC4A1APQ9BWU0 796 aaKnown RBP23.16■■□□□ 1.3
CPNE1-228ENST00000498814 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.3
CPNE1-228ENST00000498814 PKD2Q13563 968 aa23.12■■□□□ 1.29
CPNE1-228ENST00000498814 UGGT1Q9NYU2 1555 aa23.12■■□□□ 1.29
CPNE1-228ENST00000498814 PTPRTO14522 1441 aa23.11■■□□□ 1.29
CPNE1-228ENST00000498814 MPHOSPH9Q99550 1183 aa23.11■■□□□ 1.29
CPNE1-228ENST00000498814 SLC52A1Q9NWF4 448 aa23.11■■□□□ 1.29
CPNE1-228ENST00000498814 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
CPNE1-228ENST00000498814 UBR1Q8IWV7 1749 aa23.11■■□□□ 1.29
CPNE1-228ENST00000498814 KDM5AP29375 1690 aaKnown RBP23.1■■□□□ 1.29
CPNE1-228ENST00000498814 IDI1Q13907 227 aa23.09■■□□□ 1.29
CPNE1-228ENST00000498814 THEMISQ8N1K5 641 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-228ENST00000498814 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
CPNE1-228ENST00000498814 PLA2R1Q13018 1463 aa23.07■■□□□ 1.28
CPNE1-228ENST00000498814 TRPM2O94759 1503 aa23.06■■□□□ 1.28
CPNE1-228ENST00000498814 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
CPNE1-228ENST00000498814 MYO5BQ9ULV0 1848 aa23.02■■□□□ 1.28
CPNE1-228ENST00000498814 TMEM131LA2VDJ0 1609 aa23.01■■□□□ 1.27
CPNE1-228ENST00000498814 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
CPNE1-228ENST00000498814 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
CPNE1-228ENST00000498814 FOXD1Q16676 465 aa23■■□□□ 1.27
CPNE1-228ENST00000498814 CLTCL1P53675 1640 aa23■■□□□ 1.27
CPNE1-228ENST00000498814 SLIT1O75093 1534 aa22.98■■□□□ 1.27
CPNE1-228ENST00000498814 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
CPNE1-228ENST00000498814 KIF1BO60333 1816 aa22.97■■□□□ 1.27
CPNE1-228ENST00000498814 ANKLE2Q86XL3 938 aa22.96■■□□□ 1.27
CPNE1-228ENST00000498814 NCKAP5LQ9HCH0 1330 aa22.96■■□□□ 1.27
CPNE1-228ENST00000498814 TMEM2Q9UHN6 1383 aa22.95■■□□□ 1.26
CPNE1-228ENST00000498814 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
CPNE1-228ENST00000498814 CHGAP10645 457 aaKnown RBP22.93■■□□□ 1.26
CPNE1-228ENST00000498814 NEURL4Q96JN8 1562 aa22.93■■□□□ 1.26
CPNE1-228ENST00000498814 MED14O60244 1454 aa22.91■■□□□ 1.26
CPNE1-228ENST00000498814 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
CPNE1-228ENST00000498814 SCAF11Q99590 1463 aaKnown RBP22.9■■□□□ 1.26
CPNE1-228ENST00000498814 LTKP29376 864 aa22.89■■□□□ 1.25
CPNE1-228ENST00000498814 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
CPNE1-228ENST00000498814 EID1Q9Y6B2 187 aa22.89■■□□□ 1.25
CPNE1-228ENST00000498814 ANKRD30BQ9BXX2 1392 aa22.89■■□□□ 1.25
CPNE1-228ENST00000498814 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
CPNE1-228ENST00000498814 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms