RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 CD44P16070 742 aaKnown RBP16.85■□□□□ 0.29
CDK11A-222ENST00000498810 FER1L4A9Z1Z3 1794 aa16.84■□□□□ 0.29
CDK11A-222ENST00000498810 C9orf84Q5VXU9 1444 aa16.83■□□□□ 0.28
CDK11A-222ENST00000498810 GPATCH8Q9UKJ3 1502 aaKnown RBP16.83■□□□□ 0.28
CDK11A-222ENST00000498810 PLEKHH2Q8IVE3 1493 aa16.82■□□□□ 0.28
CDK11A-222ENST00000498810 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
CDK11A-222ENST00000498810 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
CDK11A-222ENST00000498810 SIGLEC1Q9BZZ2 1709 aa16.81■□□□□ 0.28
CDK11A-222ENST00000498810 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
CDK11A-222ENST00000498810 ATP10AO60312 1499 aa16.8■□□□□ 0.28
CDK11A-222ENST00000498810 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
CDK11A-222ENST00000498810 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
CDK11A-222ENST00000498810 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
CDK11A-222ENST00000498810 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.28
CDK11A-222ENST00000498810 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.28
CDK11A-222ENST00000498810 MLECQ14165 292 aa16.77■□□□□ 0.28
CDK11A-222ENST00000498810 PTPRMP28827 1452 aa16.76■□□□□ 0.27
CDK11A-222ENST00000498810 LRRC9Q6ZRR7 1453 aa16.75■□□□□ 0.27
CDK11A-222ENST00000498810 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
CDK11A-222ENST00000498810 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
CDK11A-222ENST00000498810 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
CDK11A-222ENST00000498810 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
CDK11A-222ENST00000498810 GABBR2O75899 941 aa16.73■□□□□ 0.27
CDK11A-222ENST00000498810 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
CDK11A-222ENST00000498810 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
CDK11A-222ENST00000498810 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDK11A-222ENST00000498810 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
CDK11A-222ENST00000498810 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
CDK11A-222ENST00000498810 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
CDK11A-222ENST00000498810 MIER1Q8N108 512 aa16.7■□□□□ 0.26
CDK11A-222ENST00000498810 ESF1Q9H501 851 aaKnown RBP16.69■□□□□ 0.26
CDK11A-222ENST00000498810 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
CDK11A-222ENST00000498810 ZRANB1Q9UGI0 708 aa16.67■□□□□ 0.26
CDK11A-222ENST00000498810 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
CDK11A-222ENST00000498810 AGLP35573 1532 aa16.65■□□□□ 0.26
CDK11A-222ENST00000498810 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
CDK11A-222ENST00000498810 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
CDK11A-222ENST00000498810 KANK4Q5T7N3 995 aaPredicted RBP16.63■□□□□ 0.25
CDK11A-222ENST00000498810 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
CDK11A-222ENST00000498810 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
CDK11A-222ENST00000498810 A2MP01023 1474 aa16.62■□□□□ 0.25
CDK11A-222ENST00000498810 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
CDK11A-222ENST00000498810 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
CDK11A-222ENST00000498810 CLCN6P51797 869 aa16.61■□□□□ 0.25
CDK11A-222ENST00000498810 C3P01024 1663 aa16.61■□□□□ 0.25
CDK11A-222ENST00000498810 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
CDK11A-222ENST00000498810 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
CDK11A-222ENST00000498810 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
CDK11A-222ENST00000498810 PTPN23Q9H3S7 1636 aa16.59■□□□□ 0.25
CDK11A-222ENST00000498810 MROH2AA6NES4 1674 aa16.59■□□□□ 0.25
CDK11A-222ENST00000498810 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
CDK11A-222ENST00000498810 PLCD3Q8N3E9 789 aa16.58■□□□□ 0.24
CDK11A-222ENST00000498810 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
CDK11A-222ENST00000498810 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
CDK11A-222ENST00000498810 CNTLNQ9NXG0 1405 aa16.57■□□□□ 0.24
CDK11A-222ENST00000498810 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
CDK11A-222ENST00000498810 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
CDK11A-222ENST00000498810 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
CDK11A-222ENST00000498810 RSPH4AQ5TD94 716 aa16.57■□□□□ 0.24
CDK11A-222ENST00000498810 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
CDK11A-222ENST00000498810 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
CDK11A-222ENST00000498810 SETD1BQ9UPS6 1966 aaKnown RBP16.53■□□□□ 0.24
CDK11A-222ENST00000498810 CEBPAP49715 358 aaPredicted RBP16.52■□□□□ 0.24
CDK11A-222ENST00000498810 GGT6Q6P531 493 aa16.52■□□□□ 0.24
CDK11A-222ENST00000498810 UHRF1BP1Q6BDS2 1440 aa16.52■□□□□ 0.23
CDK11A-222ENST00000498810 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
CDK11A-222ENST00000498810 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
CDK11A-222ENST00000498810 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
CDK11A-222ENST00000498810 EIF2AK4Q9P2K8 1649 aaKnown RBP16.48■□□□□ 0.23
CDK11A-222ENST00000498810 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
CDK11A-222ENST00000498810 KDM5DQ9BY66 1539 aa16.47■□□□□ 0.23
CDK11A-222ENST00000498810 KIF3BO15066 747 aa16.47■□□□□ 0.23
CDK11A-222ENST00000498810 PHF12Q96QT6 1004 aa16.47■□□□□ 0.23
CDK11A-222ENST00000498810 HSPA2P54652 639 aa16.46■□□□□ 0.23
CDK11A-222ENST00000498810 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
CDK11A-222ENST00000498810 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
CDK11A-222ENST00000498810 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
CDK11A-222ENST00000498810 TCOF1Q13428 1488 aaKnown RBP16.45■□□□□ 0.22
CDK11A-222ENST00000498810 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
CDK11A-222ENST00000498810 RNF17Q9BXT8 1623 aaKnown RBP16.45■□□□□ 0.22
CDK11A-222ENST00000498810 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
CDK11A-222ENST00000498810 DAPK1P53355 1430 aa16.45■□□□□ 0.22
CDK11A-222ENST00000498810 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
CDK11A-222ENST00000498810 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
CDK11A-222ENST00000498810 TSPYL2Q9H2G4 693 aaPredicted RBP16.43■□□□□ 0.22
CDK11A-222ENST00000498810 CEP152O94986 1710 aa16.42■□□□□ 0.22
CDK11A-222ENST00000498810 ZMYM3Q14202 1370 aa16.42■□□□□ 0.22
CDK11A-222ENST00000498810 NPATQ14207 1427 aa16.42■□□□□ 0.22
CDK11A-222ENST00000498810 KIF15Q9NS87 1388 aa16.41■□□□□ 0.22
CDK11A-222ENST00000498810 ZNF142P52746 1687 aaPredicted RBP16.41■□□□□ 0.22
CDK11A-222ENST00000498810 POTEIP0CG38 1075 aa16.41■□□□□ 0.22
CDK11A-222ENST00000498810 ABCC5O15440 1437 aa16.4■□□□□ 0.22
CDK11A-222ENST00000498810 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
CDK11A-222ENST00000498810 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
CDK11A-222ENST00000498810 WASHC2CQ9Y4E1 1318 aa16.4■□□□□ 0.22
CDK11A-222ENST00000498810 VASPP50552 380 aaPredicted RBP16.39■□□□□ 0.21
CDK11A-222ENST00000498810 NUBP1P53384 320 aa16.39■□□□□ 0.21
CDK11A-222ENST00000498810 CEP170BQ9Y4F5 1589 aaPredicted RBP16.38■□□□□ 0.21
CDK11A-222ENST00000498810 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
CDK11A-222ENST00000498810 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms