RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 NPATQ14207 1427 aa15.36■□□□□ 0.05
TSPAN1-209ENST00000498443 MROH2AA6NES4 1674 aa15.36■□□□□ 0.05
TSPAN1-209ENST00000498443 PKD2Q13563 968 aa15.36■□□□□ 0.05
TSPAN1-209ENST00000498443 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
TSPAN1-209ENST00000498443 FGD6Q6ZV73 1430 aa15.35■□□□□ 0.05
TSPAN1-209ENST00000498443 CHIC2Q9UKJ5 165 aa15.35■□□□□ 0.05
TSPAN1-209ENST00000498443 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
TSPAN1-209ENST00000498443 TOM1O60784 492 aa15.34■□□□□ 0.05
TSPAN1-209ENST00000498443 GGT6Q6P531 493 aa15.34■□□□□ 0.05
TSPAN1-209ENST00000498443 PLEKHH2Q8IVE3 1493 aa15.33■□□□□ 0.05
TSPAN1-209ENST00000498443 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
TSPAN1-209ENST00000498443 ABCC5O15440 1437 aa15.33■□□□□ 0.04
TSPAN1-209ENST00000498443 ZNF142P52746 1687 aaPredicted RBP15.32■□□□□ 0.04
TSPAN1-209ENST00000498443 MIA2Q96PC5 1412 aa15.32■□□□□ 0.04
TSPAN1-209ENST00000498443 PLA2R1Q13018 1463 aa15.32■□□□□ 0.04
TSPAN1-209ENST00000498443 ITGAEP38570 1179 aa15.31■□□□□ 0.04
TSPAN1-209ENST00000498443 ATP7AQ04656 1500 aa15.31■□□□□ 0.04
TSPAN1-209ENST00000498443 TCOF1Q13428 1488 aaKnown RBP15.3■□□□□ 0.04
TSPAN1-209ENST00000498443 CCDC141Q6ZP82 1450 aa15.29■□□□□ 0.04
TSPAN1-209ENST00000498443 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
TSPAN1-209ENST00000498443 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
TSPAN1-209ENST00000498443 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
TSPAN1-209ENST00000498443 TSPY4P0CV99 314 aa15.28■□□□□ 0.04
TSPAN1-209ENST00000498443 TSPY10P0CW01 314 aa15.28■□□□□ 0.04
TSPAN1-209ENST00000498443 ARHGEF5Q12774 1597 aa15.27■□□□□ 0.03
TSPAN1-209ENST00000498443 DAPK1P53355 1430 aa15.26■□□□□ 0.03
TSPAN1-209ENST00000498443 POLR1AO95602 1720 aaPredicted RBP15.25■□□□□ 0.03
TSPAN1-209ENST00000498443 A2MP01023 1474 aa15.25■□□□□ 0.03
TSPAN1-209ENST00000498443 CPS1P31327 1500 aa15.24■□□□□ 0.03
TSPAN1-209ENST00000498443 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
TSPAN1-209ENST00000498443 SHANK2Q9UPX8 1470 aa15.24■□□□□ 0.03
TSPAN1-209ENST00000498443 DNMT1P26358 1616 aaKnown RBP15.24■□□□□ 0.03
TSPAN1-209ENST00000498443 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
TSPAN1-209ENST00000498443 KIF3BO15066 747 aa15.23■□□□□ 0.03
TSPAN1-209ENST00000498443 ADGBQ8N7X0 1667 aa15.22■□□□□ 0.03
TSPAN1-209ENST00000498443 RTEL1-TNFRSF6BF6WH68 1400 aa15.22■□□□□ 0.03
TSPAN1-209ENST00000498443 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
TSPAN1-209ENST00000498443 NEURL4Q96JN8 1562 aa15.2■□□□□ 0.02
TSPAN1-209ENST00000498443 PLXNC1O60486 1568 aa15.19■□□□□ 0.02
TSPAN1-209ENST00000498443 FBXO31Q5XUX0 539 aaPredicted RBP15.19■□□□□ 0.02
TSPAN1-209ENST00000498443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
TSPAN1-209ENST00000498443 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
TSPAN1-209ENST00000498443 MAST1Q9Y2H9 1570 aa15.17■□□□□ 0.02
TSPAN1-209ENST00000498443 TNRQ92752 1358 aa15.17■□□□□ 0.02
TSPAN1-209ENST00000498443 KIF15Q9NS87 1388 aa15.17■□□□□ 0.02
TSPAN1-209ENST00000498443 ANKLE2Q86XL3 938 aa15.17■□□□□ 0.02
TSPAN1-209ENST00000498443 VWDEQ8N2E2 1590 aa15.15■□□□□ 0.02
TSPAN1-209ENST00000498443 ALKQ9UM73 1620 aa15.15■□□□□ 0.02
TSPAN1-209ENST00000498443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
TSPAN1-209ENST00000498443 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
TSPAN1-209ENST00000498443 NPHP4O75161 1426 aaPredicted RBP15.13■□□□□ 0.01
TSPAN1-209ENST00000498443 RGS17Q9UGC6 210 aaPredicted RBP15.12■□□□□ 0.01
TSPAN1-209ENST00000498443 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
TSPAN1-209ENST00000498443 THEMISQ8N1K5 641 aaPredicted RBP15.11■□□□□ 0.01
TSPAN1-209ENST00000498443 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
TSPAN1-209ENST00000498443 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
TSPAN1-209ENST00000498443 IQGAP1P46940 1657 aa15.09■□□□□ 0.01
TSPAN1-209ENST00000498443 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
TSPAN1-209ENST00000498443 FAM135AQ9P2D6 1515 aa15.09■□□□□ 0.01
TSPAN1-209ENST00000498443 RNF17Q9BXT8 1623 aaKnown RBP15.09■□□□□ 0.01
TSPAN1-209ENST00000498443 ADGRL2O95490 1459 aa15.08■□□□□ 0.01
TSPAN1-209ENST00000498443 LRRC7Q96NW7 1537 aa15.08■□□□□ 0.01
TSPAN1-209ENST00000498443 DUOX2Q9NRD8 1548 aa15.08■□□□□ 0.01
TSPAN1-209ENST00000498443 MROH1Q8NDA8 1641 aa15.08■□□□□ 0
TSPAN1-209ENST00000498443 PZPP20742 1482 aa15.08■□□□□ 0
TSPAN1-209ENST00000498443 KDM5DQ9BY66 1539 aa15.07■□□□□ 0
TSPAN1-209ENST00000498443 POTEAQ6S8J7 498 aa15.06■□□□□ 0
TSPAN1-209ENST00000498443 SETD1AO15047 1707 aaKnown RBP15.04■□□□□ -0
TSPAN1-209ENST00000498443 DEPDC5O75140 1603 aa15.04■□□□□ -0
TSPAN1-209ENST00000498443 SYNMO15061 1565 aa15.04■□□□□ -0
TSPAN1-209ENST00000498443 ANKRD50Q9ULJ7 1429 aa15.04■□□□□ -0
TSPAN1-209ENST00000498443 MED14O60244 1454 aa15.03■□□□□ -0
TSPAN1-209ENST00000498443 NLRP1Q9C000 1473 aa15.02■□□□□ -0
TSPAN1-209ENST00000498443 ERBINQ96RT1 1412 aa15.02■□□□□ -0
TSPAN1-209ENST00000498443 ABCC3O15438 1527 aa15.02□□□□□ -0.01
TSPAN1-209ENST00000498443 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
TSPAN1-209ENST00000498443 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
TSPAN1-209ENST00000498443 CEP152O94986 1710 aa15.01□□□□□ -0.01
TSPAN1-209ENST00000498443 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
TSPAN1-209ENST00000498443 NAIPQ13075 1403 aa15□□□□□ -0.01
TSPAN1-209ENST00000498443 EIF2AK4Q9P2K8 1649 aaKnown RBP14.99□□□□□ -0.01
TSPAN1-209ENST00000498443 ZC3H13Q5T200 1668 aaKnown RBP14.96□□□□□ -0.01
TSPAN1-209ENST00000498443 XIRP1Q702N8 1843 aaKnown RBP14.95□□□□□ -0.02
TSPAN1-209ENST00000498443 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
TSPAN1-209ENST00000498443 PRDM15P57071 1507 aaPredicted RBP14.95□□□□□ -0.02
TSPAN1-209ENST00000498443 NUP155O75694 1391 aa14.95□□□□□ -0.02
TSPAN1-209ENST00000498443 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
TSPAN1-209ENST00000498443 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
TSPAN1-209ENST00000498443 SCAF11Q99590 1463 aaKnown RBP14.93□□□□□ -0.02
TSPAN1-209ENST00000498443 FOXD1Q16676 465 aa14.92□□□□□ -0.02
TSPAN1-209ENST00000498443 ROBO1Q9Y6N7 1651 aa14.92□□□□□ -0.02
TSPAN1-209ENST00000498443 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
TSPAN1-209ENST00000498443 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
TSPAN1-209ENST00000498443 ERVK-7P63135 1459 aa14.91□□□□□ -0.02
TSPAN1-209ENST00000498443 KANK1Q14678 1352 aa14.91□□□□□ -0.02
TSPAN1-209ENST00000498443 LTKP29376 864 aa14.91□□□□□ -0.02
TSPAN1-209ENST00000498443 UNC13BO14795 1591 aa14.9□□□□□ -0.02
TSPAN1-209ENST00000498443 TMEM94Q12767 1356 aa14.89□□□□□ -0.03
TSPAN1-209ENST00000498443 EID1Q9Y6B2 187 aa14.89□□□□□ -0.03
TSPAN1-209ENST00000498443 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms