RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 HSPA1LP34931 641 aa18.95■□□□□ 0.62
CDK9-205ENST00000498339 TNRQ92752 1358 aa18.93■□□□□ 0.62
CDK9-205ENST00000498339 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
CDK9-205ENST00000498339 KDM5DQ9BY66 1539 aa18.93■□□□□ 0.62
CDK9-205ENST00000498339 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
CDK9-205ENST00000498339 PHF23Q9BUL5 403 aaPredicted RBP18.91■□□□□ 0.62
CDK9-205ENST00000498339 ZNF644Q9H582 1327 aaPredicted RBP18.91■□□□□ 0.62
CDK9-205ENST00000498339 PZPP20742 1482 aa18.9■□□□□ 0.62
CDK9-205ENST00000498339 KIF3BO15066 747 aa18.88■□□□□ 0.61
CDK9-205ENST00000498339 DHX29Q7Z478 1369 aaKnown RBP18.88■□□□□ 0.61
CDK9-205ENST00000498339 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
CDK9-205ENST00000498339 MBD5Q9P267 1494 aa18.88■□□□□ 0.61
CDK9-205ENST00000498339 FAM135AQ9P2D6 1515 aa18.88■□□□□ 0.61
CDK9-205ENST00000498339 IQGAP1P46940 1657 aa18.88■□□□□ 0.61
CDK9-205ENST00000498339 FBXO31Q5XUX0 539 aaPredicted RBP18.87■□□□□ 0.61
CDK9-205ENST00000498339 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
CDK9-205ENST00000498339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.61
CDK9-205ENST00000498339 UGGT1Q9NYU2 1555 aa18.86■□□□□ 0.61
CDK9-205ENST00000498339 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
CDK9-205ENST00000498339 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
CDK9-205ENST00000498339 CCDC141Q6ZP82 1450 aa18.85■□□□□ 0.61
CDK9-205ENST00000498339 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
CDK9-205ENST00000498339 ANKLE2Q86XL3 938 aa18.85■□□□□ 0.61
CDK9-205ENST00000498339 NLRP1Q9C000 1473 aa18.84■□□□□ 0.61
CDK9-205ENST00000498339 NPHP4O75161 1426 aaPredicted RBP18.83■□□□□ 0.61
CDK9-205ENST00000498339 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.6
CDK9-205ENST00000498339 RNF17Q9BXT8 1623 aaKnown RBP18.82■□□□□ 0.6
CDK9-205ENST00000498339 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
CDK9-205ENST00000498339 SYNMO15061 1565 aa18.81■□□□□ 0.6
CDK9-205ENST00000498339 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
CDK9-205ENST00000498339 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
CDK9-205ENST00000498339 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
CDK9-205ENST00000498339 MIA2Q96PC5 1412 aa18.8■□□□□ 0.6
CDK9-205ENST00000498339 ZC3H13Q5T200 1668 aaKnown RBP18.79■□□□□ 0.6
CDK9-205ENST00000498339 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
CDK9-205ENST00000498339 MED14O60244 1454 aa18.78■□□□□ 0.6
CDK9-205ENST00000498339 NCOA2Q15596 1464 aa18.76■□□□□ 0.59
CDK9-205ENST00000498339 CEP152O94986 1710 aa18.75■□□□□ 0.59
CDK9-205ENST00000498339 ARHGEF5Q12774 1597 aa18.74■□□□□ 0.59
CDK9-205ENST00000498339 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
CDK9-205ENST00000498339 ABCC3O15438 1527 aa18.73■□□□□ 0.59
CDK9-205ENST00000498339 RSPH4AQ5TD94 716 aa18.72■□□□□ 0.59
CDK9-205ENST00000498339 UBR1Q8IWV7 1749 aa18.71■□□□□ 0.59
CDK9-205ENST00000498339 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
CDK9-205ENST00000498339 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
CDK9-205ENST00000498339 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.58
CDK9-205ENST00000498339 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
CDK9-205ENST00000498339 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
CDK9-205ENST00000498339 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
CDK9-205ENST00000498339 MAST1Q9Y2H9 1570 aa18.66■□□□□ 0.58
CDK9-205ENST00000498339 MROH1Q8NDA8 1641 aa18.64■□□□□ 0.57
CDK9-205ENST00000498339 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.56
CDK9-205ENST00000498339 PIK3C2BO00750 1634 aa18.58■□□□□ 0.56
CDK9-205ENST00000498339 SLIT1O75093 1534 aa18.58■□□□□ 0.56
CDK9-205ENST00000498339 EID1Q9Y6B2 187 aa18.57■□□□□ 0.56
CDK9-205ENST00000498339 DUOX2Q9NRD8 1548 aa18.57■□□□□ 0.56
CDK9-205ENST00000498339 ARHGAP23Q9P227 1491 aa18.56■□□□□ 0.56
CDK9-205ENST00000498339 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
CDK9-205ENST00000498339 CROCC2H7BZ55 1655 aa18.55■□□□□ 0.56
CDK9-205ENST00000498339 ROBO1Q9Y6N7 1651 aa18.55■□□□□ 0.56
CDK9-205ENST00000498339 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
CDK9-205ENST00000498339 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
CDK9-205ENST00000498339 LTKP29376 864 aa18.54■□□□□ 0.56
CDK9-205ENST00000498339 STAG3Q9UJ98 1225 aa18.54■□□□□ 0.56
CDK9-205ENST00000498339 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.56
CDK9-205ENST00000498339 MYOM3Q5VTT5 1437 aa18.5■□□□□ 0.55
CDK9-205ENST00000498339 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
CDK9-205ENST00000498339 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
CDK9-205ENST00000498339 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
CDK9-205ENST00000498339 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
CDK9-205ENST00000498339 TMEM2Q9UHN6 1383 aa18.48■□□□□ 0.55
CDK9-205ENST00000498339 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
CDK9-205ENST00000498339 MAP3K1Q13233 1512 aa18.47■□□□□ 0.55
CDK9-205ENST00000498339 KANK1Q14678 1352 aa18.46■□□□□ 0.55
CDK9-205ENST00000498339 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
CDK9-205ENST00000498339 RBM33Q96EV2 1170 aaKnown RBP18.45■□□□□ 0.54
CDK9-205ENST00000498339 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
CDK9-205ENST00000498339 PROSER2Q86WR7 435 aaPredicted RBP18.44■□□□□ 0.54
CDK9-205ENST00000498339 PTPN23Q9H3S7 1636 aa18.44■□□□□ 0.54
CDK9-205ENST00000498339 BCANQ96GW7 911 aa18.43■□□□□ 0.54
CDK9-205ENST00000498339 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
CDK9-205ENST00000498339 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
CDK9-205ENST00000498339 NKTRP30414 1462 aaKnown RBP18.42■□□□□ 0.54
CDK9-205ENST00000498339 KCNA6P17658 529 aa18.42■□□□□ 0.54
CDK9-205ENST00000498339 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
CDK9-205ENST00000498339 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
CDK9-205ENST00000498339 MSH6P52701 1360 aa18.41■□□□□ 0.54
CDK9-205ENST00000498339 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
CDK9-205ENST00000498339 TET3O43151 1660 aa18.4■□□□□ 0.54
CDK9-205ENST00000498339 ABCC5O15440 1437 aa18.39■□□□□ 0.53
CDK9-205ENST00000498339 IDI1Q13907 227 aa18.37■□□□□ 0.53
CDK9-205ENST00000498339 DAPK1P53355 1430 aa18.37■□□□□ 0.53
CDK9-205ENST00000498339 LMTK2Q8IWU2 1503 aa18.37■□□□□ 0.53
CDK9-205ENST00000498339 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
CDK9-205ENST00000498339 JCADQ9P266 1359 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms