RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.45
SSBP1-214ENST00000498107 FAM135AQ9P2D6 1515 aa24.14■■□□□ 1.45
SSBP1-214ENST00000498107 RIMS1Q86UR5 1692 aaKnown RBP24.13■■□□□ 1.45
SSBP1-214ENST00000498107 RNF17Q9BXT8 1623 aaKnown RBP24.13■■□□□ 1.45
SSBP1-214ENST00000498107 PTPRMP28827 1452 aa24.11■■□□□ 1.45
SSBP1-214ENST00000498107 WASHC2CQ9Y4E1 1318 aa24.07■■□□□ 1.44
SSBP1-214ENST00000498107 KANK1Q14678 1352 aa24.06■■□□□ 1.44
SSBP1-214ENST00000498107 MROH2AA6NES4 1674 aa24.05■■□□□ 1.44
SSBP1-214ENST00000498107 KDM5DQ9BY66 1539 aa24.05■■□□□ 1.44
SSBP1-214ENST00000498107 DEPDC5O75140 1603 aa24.05■■□□□ 1.44
SSBP1-214ENST00000498107 HFM1A2PYH4 1435 aa24.04■■□□□ 1.44
SSBP1-214ENST00000498107 CLTCQ00610 1675 aaKnown RBP24.04■■□□□ 1.44
SSBP1-214ENST00000498107 PRDM15P57071 1507 aaPredicted RBP24.04■■□□□ 1.44
SSBP1-214ENST00000498107 ZC3H13Q5T200 1668 aaKnown RBP24.03■■□□□ 1.44
SSBP1-214ENST00000498107 GCC2Q8IWJ2 1684 aa24.03■■□□□ 1.44
SSBP1-214ENST00000498107 NAIPQ13075 1403 aa24.02■■□□□ 1.44
SSBP1-214ENST00000498107 MROH1Q8NDA8 1641 aa24.02■■□□□ 1.44
SSBP1-214ENST00000498107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.435e-6■□□□□ 8.4
SSBP1-214ENST00000498107 ZMYM3Q14202 1370 aa24.01■■□□□ 1.43
SSBP1-214ENST00000498107 ABCC3O15438 1527 aa23.98■■□□□ 1.43
SSBP1-214ENST00000498107 C3P01024 1663 aa23.98■■□□□ 1.43
SSBP1-214ENST00000498107 UNC13BO14795 1591 aa23.97■■□□□ 1.43
SSBP1-214ENST00000498107 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
SSBP1-214ENST00000498107 CEBPAP49715 358 aaPredicted RBP23.95■■□□□ 1.42
SSBP1-214ENST00000498107 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.42
SSBP1-214ENST00000498107 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
SSBP1-214ENST00000498107 CEP152O94986 1710 aa23.93■■□□□ 1.42
SSBP1-214ENST00000498107 LMTK2Q8IWU2 1503 aa23.93■■□□□ 1.42
SSBP1-214ENST00000498107 NPATQ14207 1427 aa23.93■■□□□ 1.42
SSBP1-214ENST00000498107 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
SSBP1-214ENST00000498107 PZPP20742 1482 aa23.91■■□□□ 1.42
SSBP1-214ENST00000498107 CAMSAP1Q5T5Y3 1602 aa23.91■■□□□ 1.42
SSBP1-214ENST00000498107 NUP155O75694 1391 aa23.91■■□□□ 1.42
SSBP1-214ENST00000498107 ARHGAP31Q2M1Z3 1444 aa23.89■■□□□ 1.41
SSBP1-214ENST00000498107 SETD5Q9C0A6 1442 aa23.89■■□□□ 1.41
SSBP1-214ENST00000498107 IQGAP3Q86VI3 1631 aa23.88■■□□□ 1.41
SSBP1-214ENST00000498107 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
SSBP1-214ENST00000498107 TET3O43151 1660 aa23.85■■□□□ 1.41
SSBP1-214ENST00000498107 TRIM52Q96A61 297 aa23.84■■□□□ 1.41
SSBP1-214ENST00000498107 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
SSBP1-214ENST00000498107 PREX1Q8TCU6 1659 aa23.83■■□□□ 1.4
SSBP1-214ENST00000498107 RPRD2Q5VT52 1461 aaKnown RBP23.82■■□□□ 1.4
SSBP1-214ENST00000498107 UHRF1BP1Q6BDS2 1440 aa23.82■■□□□ 1.4
SSBP1-214ENST00000498107 FBXO31Q5XUX0 539 aaPredicted RBP23.81■■□□□ 1.4
SSBP1-214ENST00000498107 TNRQ92752 1358 aa23.8■■□□□ 1.4
SSBP1-214ENST00000498107 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
SSBP1-214ENST00000498107 ERVK-7P63135 1459 aa23.79■■□□□ 1.4
SSBP1-214ENST00000498107 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
SSBP1-214ENST00000498107 HRCP23327 699 aa23.78■■□□□ 1.4
SSBP1-214ENST00000498107 CFAP65Q6ZU64 1925 aaKnown RBP23.78■■□□□ 1.4
SSBP1-214ENST00000498107 MYO3AQ8NEV4 1616 aa23.74■■□□□ 1.39
SSBP1-214ENST00000498107 LMTK3Q96Q04 1460 aa23.74■■□□□ 1.39
SSBP1-214ENST00000498107 NLRP1Q9C000 1473 aa23.74■■□□□ 1.39
SSBP1-214ENST00000498107 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
SSBP1-214ENST00000498107 E9PCH4 1651 aa23.73■■□□□ 1.39
SSBP1-214ENST00000498107 NOS1P29475 1434 aa23.71■■□□□ 1.39
SSBP1-214ENST00000498107 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.38
SSBP1-214ENST00000498107 A2ML1A8K2U0 1454 aa23.69■■□□□ 1.38
SSBP1-214ENST00000498107 CEP170BQ9Y4F5 1589 aaPredicted RBP23.69■■□□□ 1.38
SSBP1-214ENST00000498107 SLC52A1Q9NWF4 448 aa23.68■■□□□ 1.38
SSBP1-214ENST00000498107 PKD2Q13563 968 aa23.67■■□□□ 1.38
SSBP1-214ENST00000498107 MPHOSPH9Q99550 1183 aa23.67■■□□□ 1.38
SSBP1-214ENST00000498107 SYNMO15061 1565 aa23.64■■□□□ 1.37
SSBP1-214ENST00000498107 UGGT1Q9NYU2 1555 aa23.62■■□□□ 1.37
SSBP1-214ENST00000498107 HSPA2P54652 639 aa23.62■■□□□ 1.37
SSBP1-214ENST00000498107 THEMISQ8N1K5 641 aaPredicted RBP23.62■■□□□ 1.37
SSBP1-214ENST00000498107 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
SSBP1-214ENST00000498107 PTPRTO14522 1441 aa23.61■■□□□ 1.37
SSBP1-214ENST00000498107 IDI1Q13907 227 aa23.6■■□□□ 1.37
SSBP1-214ENST00000498107 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
SSBP1-214ENST00000498107 KDM5AP29375 1690 aaKnown RBP23.58■■□□□ 1.37
SSBP1-214ENST00000498107 PIK3C2BO00750 1634 aa23.57■■□□□ 1.36
SSBP1-214ENST00000498107 TRPM2O94759 1503 aa23.57■■□□□ 1.36
SSBP1-214ENST00000498107 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
SSBP1-214ENST00000498107 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
SSBP1-214ENST00000498107 UBR1Q8IWV7 1749 aa23.56■■□□□ 1.36
SSBP1-214ENST00000498107 ADGRB3O60242 1522 aa23.53■■□□□ 1.36
SSBP1-214ENST00000498107 FOXD1Q16676 465 aa23.51■■□□□ 1.35
SSBP1-214ENST00000498107 DMRT2Q9Y5R5 561 aa23.5■■□□□ 1.35
SSBP1-214ENST00000498107 CHGAP10645 457 aaKnown RBP23.49■■□□□ 1.35
SSBP1-214ENST00000498107 ANKLE2Q86XL3 938 aa23.49■■□□□ 1.35
SSBP1-214ENST00000498107 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
SSBP1-214ENST00000498107 CCDC144AA2RUR9 1427 aa23.48■■□□□ 1.35
SSBP1-214ENST00000498107 TMEM131LA2VDJ0 1609 aa23.48■■□□□ 1.35
SSBP1-214ENST00000498107 HDGFP51858 240 aaKnown RBP23.47■■□□□ 1.35
SSBP1-214ENST00000498107 SLIT1O75093 1534 aa23.47■■□□□ 1.35
SSBP1-214ENST00000498107 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
SSBP1-214ENST00000498107 TMEM2Q9UHN6 1383 aa23.46■■□□□ 1.35
SSBP1-214ENST00000498107 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
SSBP1-214ENST00000498107 KIF1BO60333 1816 aa23.45■■□□□ 1.34
SSBP1-214ENST00000498107 STRCQ7RTU9 1775 aa23.45■■□□□ 1.34
SSBP1-214ENST00000498107 ARHGAP23Q9P227 1491 aa23.45■■□□□ 1.34
SSBP1-214ENST00000498107 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
SSBP1-214ENST00000498107 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
SSBP1-214ENST00000498107 MYO5BQ9ULV0 1848 aa23.42■■□□□ 1.34
SSBP1-214ENST00000498107 ANKRD30BQ9BXX2 1392 aa23.41■■□□□ 1.34
SSBP1-214ENST00000498107 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
SSBP1-214ENST00000498107 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.41■■□□□ 1.34
SSBP1-214ENST00000498107 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
SSBP1-214ENST00000498107 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms