RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 ESF1Q9H501 851 aaKnown RBP30.14■■■□□ 2.42
HLA-B-255ENST00000498007 PLPPR3Q6T4P5 718 aa30.13■■■□□ 2.41
HLA-B-255ENST00000498007 ROCK1Q13464 1354 aa30.09■■■□□ 2.41
HLA-B-255ENST00000498007 CNTLNQ9NXG0 1405 aa30.09■■■□□ 2.41
HLA-B-255ENST00000498007 MROH2AA6NES4 1674 aa30.08■■■□□ 2.41
HLA-B-255ENST00000498007 C3P01024 1663 aa30.07■■■□□ 2.41
HLA-B-255ENST00000498007 MROH1Q8NDA8 1641 aa30.07■■■□□ 2.4
HLA-B-255ENST00000498007 KDM5DQ9BY66 1539 aa30.06■■■□□ 2.4
HLA-B-255ENST00000498007 ANKRD50Q9ULJ7 1429 aa30.04■■■□□ 2.4
HLA-B-255ENST00000498007 DEPDC5O75140 1603 aa30.04■■■□□ 2.4
HLA-B-255ENST00000498007 PRDM15P57071 1507 aaPredicted RBP30.02■■■□□ 2.4
HLA-B-255ENST00000498007 FAM135AQ9P2D6 1515 aa30.02■■■□□ 2.4
HLA-B-255ENST00000498007 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.4
HLA-B-255ENST00000498007 CEBPAP49715 358 aaPredicted RBP30.01■■■□□ 2.39
HLA-B-255ENST00000498007 CEP152O94986 1710 aa30■■■□□ 2.39
HLA-B-255ENST00000498007 PPP6R1Q9UPN7 881 aa30■■■□□ 2.39
HLA-B-255ENST00000498007 WASHC2CQ9Y4E1 1318 aa29.97■■■□□ 2.39
HLA-B-255ENST00000498007 ABCC3O15438 1527 aa29.97■■■□□ 2.39
HLA-B-255ENST00000498007 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
HLA-B-255ENST00000498007 ZMYM3Q14202 1370 aa29.95■■■□□ 2.39
HLA-B-255ENST00000498007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.95■■■□□ 2.39
HLA-B-255ENST00000498007 CAMSAP1Q5T5Y3 1602 aa29.93■■■□□ 2.38
HLA-B-255ENST00000498007 UNC13BO14795 1591 aa29.91■■■□□ 2.38
HLA-B-255ENST00000498007 KANK1Q14678 1352 aa29.9■■■□□ 2.38
HLA-B-255ENST00000498007 PREX1Q8TCU6 1659 aa29.88■■■□□ 2.37
HLA-B-255ENST00000498007 NAIPQ13075 1403 aa29.88■■■□□ 2.37
HLA-B-255ENST00000498007 VWDEQ8N2E2 1590 aa29.87■■■□□ 2.37
HLA-B-255ENST00000498007 HFM1A2PYH4 1435 aa29.87■■■□□ 2.37
HLA-B-255ENST00000498007 PZPP20742 1482 aa29.86■■■□□ 2.37
HLA-B-255ENST00000498007 NPATQ14207 1427 aa29.83■■■□□ 2.37
HLA-B-255ENST00000498007 LMTK2Q8IWU2 1503 aa29.81■■■□□ 2.36
HLA-B-255ENST00000498007 LMTK3Q96Q04 1460 aa29.8■■■□□ 2.36
HLA-B-255ENST00000498007 MYO3AQ8NEV4 1616 aa29.79■■■□□ 2.36
HLA-B-255ENST00000498007 EFCAB6Q5THR3 1501 aa29.78■■■□□ 2.36
HLA-B-255ENST00000498007 UHRF1BP1Q6BDS2 1440 aa29.78■■■□□ 2.36
HLA-B-255ENST00000498007 IQGAP3Q86VI3 1631 aa29.78■■■□□ 2.36
HLA-B-255ENST00000498007 TET3O43151 1660 aa29.76■■■□□ 2.36
HLA-B-255ENST00000498007 SETD1BQ9UPS6 1966 aaKnown RBP29.76■■■□□ 2.35
HLA-B-255ENST00000498007 FBXO31Q5XUX0 539 aaPredicted RBP29.76■■■□□ 2.35
HLA-B-255ENST00000498007 CFAP65Q6ZU64 1925 aaKnown RBP29.74■■■□□ 2.35
HLA-B-255ENST00000498007 NUP155O75694 1391 aa29.73■■■□□ 2.35
HLA-B-255ENST00000498007 ERVK-7P63135 1459 aa29.73■■■□□ 2.35
HLA-B-255ENST00000498007 ARHGAP31Q2M1Z3 1444 aa29.72■■■□□ 2.35
HLA-B-255ENST00000498007 TNRQ92752 1358 aa29.72■■■□□ 2.35
HLA-B-255ENST00000498007 SPATA31D1Q6ZQQ2 1576 aa29.72■■■□□ 2.35
HLA-B-255ENST00000498007 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
HLA-B-255ENST00000498007 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
HLA-B-255ENST00000498007 E9PCH4 1651 aa29.66■■■□□ 2.34
HLA-B-255ENST00000498007 HSPA2P54652 639 aa29.65■■■□□ 2.34
HLA-B-255ENST00000498007 SETD5Q9C0A6 1442 aa29.63■■■□□ 2.33
HLA-B-255ENST00000498007 TRIM52Q96A61 297 aa29.63■■■□□ 2.33
HLA-B-255ENST00000498007 RPRD2Q5VT52 1461 aaKnown RBP29.62■■■□□ 2.33
HLA-B-255ENST00000498007 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
HLA-B-255ENST00000498007 NLRP1Q9C000 1473 aa29.6■■■□□ 2.33
HLA-B-255ENST00000498007 SYNMO15061 1565 aa29.59■■■□□ 2.33
HLA-B-255ENST00000498007 RAB3GAP2Q9H2M9 1393 aa29.56■■■□□ 2.32
HLA-B-255ENST00000498007 NOS1P29475 1434 aa29.55■■■□□ 2.32
HLA-B-255ENST00000498007 UGGT1Q9NYU2 1555 aa29.52■■■□□ 2.32
HLA-B-255ENST00000498007 PIK3C2BO00750 1634 aa29.52■■■□□ 2.32
HLA-B-255ENST00000498007 SPHKAPQ2M3C7 1700 aa29.51■■■□□ 2.31
HLA-B-255ENST00000498007 UBR1Q8IWV7 1749 aa29.49■■■□□ 2.31
HLA-B-255ENST00000498007 SLC4A1APQ9BWU0 796 aaKnown RBP29.48■■■□□ 2.31
HLA-B-255ENST00000498007 STRCQ7RTU9 1775 aa29.47■■■□□ 2.31
HLA-B-255ENST00000498007 PKD2Q13563 968 aa29.43■■■□□ 2.3
HLA-B-255ENST00000498007 PLA2R1Q13018 1463 aa29.42■■■□□ 2.3
HLA-B-255ENST00000498007 ADGRB3O60242 1522 aa29.42■■■□□ 2.3
HLA-B-255ENST00000498007 TRIM26Q12899 539 aaPredicted RBP29.41■■■□□ 2.3
HLA-B-255ENST00000498007 IDI1Q13907 227 aa29.41■■■□□ 2.3
HLA-B-255ENST00000498007 ACIN1Q9UKV3 1341 aaKnown RBP29.41■■■□□ 2.3
HLA-B-255ENST00000498007 POLR1AO95602 1720 aaPredicted RBP29.4■■■□□ 2.3
HLA-B-255ENST00000498007 KDM5AP29375 1690 aaKnown RBP29.4■■■□□ 2.3
HLA-B-255ENST00000498007 SLC52A1Q9NWF4 448 aa29.39■■■□□ 2.3
HLA-B-255ENST00000498007 STAG3Q9UJ98 1225 aa29.39■■■□□ 2.3
HLA-B-255ENST00000498007 TRPM2O94759 1503 aa29.39■■■□□ 2.3
HLA-B-255ENST00000498007 THEMISQ8N1K5 641 aaPredicted RBP29.38■■■□□ 2.29
HLA-B-255ENST00000498007 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
HLA-B-255ENST00000498007 PTPRTO14522 1441 aa29.37■■■□□ 2.29
HLA-B-255ENST00000498007 MYO5BQ9ULV0 1848 aa29.36■■■□□ 2.29
HLA-B-255ENST00000498007 FOXD1Q16676 465 aa29.35■■■□□ 2.29
HLA-B-255ENST00000498007 NCKAP5LQ9HCH0 1330 aa29.35■■■□□ 2.29
HLA-B-255ENST00000498007 CLTCL1P53675 1640 aa29.34■■■□□ 2.29
HLA-B-255ENST00000498007 TMEM131LA2VDJ0 1609 aa29.33■■■□□ 2.29
HLA-B-255ENST00000498007 NEURL4Q96JN8 1562 aa29.3■■■□□ 2.28
HLA-B-255ENST00000498007 CHGAP10645 457 aaKnown RBP29.3■■■□□ 2.28
HLA-B-255ENST00000498007 HRCP23327 699 aa29.3■■■□□ 2.28
HLA-B-255ENST00000498007 SLIT1O75093 1534 aa29.3■■■□□ 2.28
HLA-B-255ENST00000498007 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
HLA-B-255ENST00000498007 ANKLE2Q86XL3 938 aa29.26■■■□□ 2.27
HLA-B-255ENST00000498007 TMEM2Q9UHN6 1383 aa29.26■■■□□ 2.27
HLA-B-255ENST00000498007 KIF1BO60333 1816 aa29.25■■■□□ 2.27
HLA-B-255ENST00000498007 DMRT2Q9Y5R5 561 aa29.25■■■□□ 2.27
HLA-B-255ENST00000498007 SCAF11Q99590 1463 aaKnown RBP29.24■■■□□ 2.27
HLA-B-255ENST00000498007 IQGAP1P46940 1657 aa29.21■■■□□ 2.27
HLA-B-255ENST00000498007 CCDC144AA2RUR9 1427 aa29.2■■■□□ 2.26
HLA-B-255ENST00000498007 NPHP4O75161 1426 aaPredicted RBP29.2■■■□□ 2.26
HLA-B-255ENST00000498007 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
HLA-B-255ENST00000498007 EID1Q9Y6B2 187 aa29.19■■■□□ 2.26
HLA-B-255ENST00000498007 MED14O60244 1454 aa29.18■■■□□ 2.26
HLA-B-255ENST00000498007 RIMS2Q9UQ26 1411 aa29.18■■■□□ 2.26
HLA-B-255ENST00000498007 LTKP29376 864 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms