RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 GGT6Q6P531 493 aa15.78■□□□□ 0.12
CCDC58-206ENST00000497726 TROQ12816 1431 aaPredicted RBP15.77■□□□□ 0.12
CCDC58-206ENST00000497726 CDK11AQ9UQ88 783 aaPredicted RBP15.76■□□□□ 0.11
CCDC58-206ENST00000497726 FBXO31Q5XUX0 539 aaPredicted RBP15.75■□□□□ 0.11
CCDC58-206ENST00000497726 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
CCDC58-206ENST00000497726 MED14O60244 1454 aa15.73■□□□□ 0.11
CCDC58-206ENST00000497726 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
CCDC58-206ENST00000497726 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
CCDC58-206ENST00000497726 ABCC1P33527 1531 aa15.72■□□□□ 0.11
CCDC58-206ENST00000497726 SYNMO15061 1565 aa15.71■□□□□ 0.11
CCDC58-206ENST00000497726 CDC42BPBQ9Y5S2 1711 aa15.71■□□□□ 0.1
CCDC58-206ENST00000497726 PREX2Q70Z35 1606 aa15.7■□□□□ 0.1
CCDC58-206ENST00000497726 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
CCDC58-206ENST00000497726 THEMISQ8N1K5 641 aaPredicted RBP15.7■□□□□ 0.1
CCDC58-206ENST00000497726 TNRQ92752 1358 aa15.7■□□□□ 0.1
CCDC58-206ENST00000497726 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
CCDC58-206ENST00000497726 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
CCDC58-206ENST00000497726 IQGAP1P46940 1657 aa15.68■□□□□ 0.1
CCDC58-206ENST00000497726 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
CCDC58-206ENST00000497726 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
CCDC58-206ENST00000497726 ZNF772Q68DY9 489 aaPredicted RBP15.66■□□□□ 0.1
CCDC58-206ENST00000497726 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
CCDC58-206ENST00000497726 RXRBP28702 533 aa15.65■□□□□ 0.1
CCDC58-206ENST00000497726 A2MP01023 1474 aa15.64■□□□□ 0.09
CCDC58-206ENST00000497726 XIRP1Q702N8 1843 aaKnown RBP15.64■□□□□ 0.09
CCDC58-206ENST00000497726 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
CCDC58-206ENST00000497726 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
CCDC58-206ENST00000497726 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
CCDC58-206ENST00000497726 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
CCDC58-206ENST00000497726 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
CCDC58-206ENST00000497726 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
CCDC58-206ENST00000497726 FAM135AQ9P2D6 1515 aa15.62■□□□□ 0.09
CCDC58-206ENST00000497726 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
CCDC58-206ENST00000497726 JCADQ9P266 1359 aa15.62■□□□□ 0.09
CCDC58-206ENST00000497726 LRP6O75581 1613 aa15.61■□□□□ 0.09
CCDC58-206ENST00000497726 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
CCDC58-206ENST00000497726 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.093e-7■■■■■ 27.8
CCDC58-206ENST00000497726 ZRANB1Q9UGI0 708 aa15.6■□□□□ 0.09
CCDC58-206ENST00000497726 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
CCDC58-206ENST00000497726 MIA2Q96PC5 1412 aa15.58■□□□□ 0.08
CCDC58-206ENST00000497726 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.08
CCDC58-206ENST00000497726 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
CCDC58-206ENST00000497726 RBM33Q96EV2 1170 aaKnown RBP15.57■□□□□ 0.08
CCDC58-206ENST00000497726 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
CCDC58-206ENST00000497726 ATP7AQ04656 1500 aa15.57■□□□□ 0.08
CCDC58-206ENST00000497726 NLRP1Q9C000 1473 aa15.56■□□□□ 0.08
CCDC58-206ENST00000497726 CDK12Q9NYV4 1490 aaPredicted RBP15.56■□□□□ 0.08
CCDC58-206ENST00000497726 GPATCH8Q9UKJ3 1502 aaKnown RBP15.56■□□□□ 0.08
CCDC58-206ENST00000497726 ZC3H13Q5T200 1668 aaKnown RBP15.55■□□□□ 0.08
CCDC58-206ENST00000497726 PZPP20742 1482 aa15.55■□□□□ 0.08
CCDC58-206ENST00000497726 TMEM94Q12767 1356 aa15.55■□□□□ 0.08
CCDC58-206ENST00000497726 PHLPP1O60346 1717 aa15.54■□□□□ 0.08
CCDC58-206ENST00000497726 NUTM2BA6NNL0 878 aaPredicted RBP15.53■□□□□ 0.08
CCDC58-206ENST00000497726 NUTM2EB1AL46 878 aaPredicted RBP15.53■□□□□ 0.08
CCDC58-206ENST00000497726 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
CCDC58-206ENST00000497726 NUTM2AQ8IVF1 878 aaPredicted RBP15.53■□□□□ 0.08
CCDC58-206ENST00000497726 SPATA31A6Q5VVP1 1343 aa15.52■□□□□ 0.08
CCDC58-206ENST00000497726 KDM5DQ9BY66 1539 aa15.52■□□□□ 0.07
CCDC58-206ENST00000497726 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
CCDC58-206ENST00000497726 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
CCDC58-206ENST00000497726 RGS12O14924 1447 aa15.51■□□□□ 0.07
CCDC58-206ENST00000497726 LTKP29376 864 aa15.5■□□□□ 0.07
CCDC58-206ENST00000497726 NCOA2Q15596 1464 aa15.5■□□□□ 0.07
CCDC58-206ENST00000497726 WASHC2CQ9Y4E1 1318 aa15.48■□□□□ 0.07
CCDC58-206ENST00000497726 SLAIN2Q9P270 581 aa15.48■□□□□ 0.07
CCDC58-206ENST00000497726 DCAF8L1A6NGE4 600 aa15.47■□□□□ 0.07
CCDC58-206ENST00000497726 MAP3K1Q13233 1512 aa15.47■□□□□ 0.07
CCDC58-206ENST00000497726 COL16A1Q07092 1604 aaPredicted RBP15.46■□□□□ 0.07
CCDC58-206ENST00000497726 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
CCDC58-206ENST00000497726 SCAF11Q99590 1463 aaKnown RBP15.46■□□□□ 0.07
CCDC58-206ENST00000497726 AFF2P51816 1311 aa15.46■□□□□ 0.07
CCDC58-206ENST00000497726 ZNF644Q9H582 1327 aaPredicted RBP15.46■□□□□ 0.07
CCDC58-206ENST00000497726 KIF3BO15066 747 aa15.46■□□□□ 0.07
CCDC58-206ENST00000497726 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
CCDC58-206ENST00000497726 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.07
CCDC58-206ENST00000497726 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
CCDC58-206ENST00000497726 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
CCDC58-206ENST00000497726 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
CCDC58-206ENST00000497726 FGD6Q6ZV73 1430 aa15.43■□□□□ 0.06
CCDC58-206ENST00000497726 RBM6P78332 1123 aaKnown RBP15.42■□□□□ 0.06
CCDC58-206ENST00000497726 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
CCDC58-206ENST00000497726 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
CCDC58-206ENST00000497726 QTRT2Q9H974 415 aaKnown RBP15.42■□□□□ 0.06
CCDC58-206ENST00000497726 DHX29Q7Z478 1369 aaKnown RBP15.41■□□□□ 0.06
CCDC58-206ENST00000497726 KCNA6P17658 529 aa15.41■□□□□ 0.06
CCDC58-206ENST00000497726 KIAA1107Q9UPP5 1409 aa15.41■□□□□ 0.06
CCDC58-206ENST00000497726 ATAD2Q6PL18 1390 aa15.4■□□□□ 0.06
CCDC58-206ENST00000497726 IFFO2Q5TF58 517 aa15.4■□□□□ 0.06
CCDC58-206ENST00000497726 MSH6P52701 1360 aa15.39■□□□□ 0.05
CCDC58-206ENST00000497726 APLP2Q06481 763 aa15.38■□□□□ 0.05
CCDC58-206ENST00000497726 EP400Q96L91 3159 aa15.38■□□□□ 0.05
CCDC58-206ENST00000497726 CCDC141Q6ZP82 1450 aa15.37■□□□□ 0.05
CCDC58-206ENST00000497726 ARHGAP23Q9P227 1491 aa15.36■□□□□ 0.05
CCDC58-206ENST00000497726 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
CCDC58-206ENST00000497726 UBR1Q8IWV7 1749 aa15.36■□□□□ 0.05
CCDC58-206ENST00000497726 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
CCDC58-206ENST00000497726 PRDM15P57071 1507 aaPredicted RBP15.35■□□□□ 0.05
CCDC58-206ENST00000497726 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
CCDC58-206ENST00000497726 EID1Q9Y6B2 187 aa15.35■□□□□ 0.05
CCDC58-206ENST00000497726 C8orf37Q96NL8 207 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms