RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 XIRP1Q702N8 1843 aaKnown RBP24.2■■□□□ 1.46
RNF220-218ENST00000497469 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
RNF220-218ENST00000497469 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
RNF220-218ENST00000497469 ROBO1Q9Y6N7 1651 aa24.19■■□□□ 1.46
RNF220-218ENST00000497469 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
RNF220-218ENST00000497469 SYCP2Q9BX26 1530 aa24.18■■□□□ 1.46
RNF220-218ENST00000497469 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
RNF220-218ENST00000497469 ZNF777Q9ULD5 760 aaPredicted RBP24.17■■□□□ 1.46
RNF220-218ENST00000497469 HNRNPMP52272 730 aaKnown RBP eCLIP24.13■■□□□ 1.45
RNF220-218ENST00000497469 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
RNF220-218ENST00000497469 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
RNF220-218ENST00000497469 LRP6O75581 1613 aa24.11■■□□□ 1.45
RNF220-218ENST00000497469 ZC3H13Q5T200 1668 aaKnown RBP24.11■■□□□ 1.45
RNF220-218ENST00000497469 PZPP20742 1482 aa24.1■■□□□ 1.45
RNF220-218ENST00000497469 CDC42BPAQ5VT25 1732 aa24.09■■□□□ 1.45
RNF220-218ENST00000497469 LRRIQ1Q96JM4 1722 aa24.08■■□□□ 1.45
RNF220-218ENST00000497469 MEX3CQ5U5Q3 659 aaKnown RBP24.08■■□□□ 1.45
RNF220-218ENST00000497469 NLRP1Q9C000 1473 aa24.07■■□□□ 1.44
RNF220-218ENST00000497469 JCADQ9P266 1359 aa24.07■■□□□ 1.44
RNF220-218ENST00000497469 ZNF772Q68DY9 489 aaPredicted RBP24.07■■□□□ 1.44
RNF220-218ENST00000497469 MIA2Q96PC5 1412 aa24.07■■□□□ 1.44
RNF220-218ENST00000497469 RXRBP28702 533 aa24.06■■□□□ 1.44
RNF220-218ENST00000497469 PHLPP1O60346 1717 aa24.05■■□□□ 1.44
RNF220-218ENST00000497469 SETBP1Q9Y6X0 1596 aa24.04■■□□□ 1.44
RNF220-218ENST00000497469 FMN1Q68DA7 1419 aa24.03■■□□□ 1.44
RNF220-218ENST00000497469 RBM33Q96EV2 1170 aaKnown RBP24.02■■□□□ 1.44
RNF220-218ENST00000497469 TMEM94Q12767 1356 aa24■■□□□ 1.43
RNF220-218ENST00000497469 KDM5DQ9BY66 1539 aa24■■□□□ 1.43
RNF220-218ENST00000497469 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
RNF220-218ENST00000497469 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
RNF220-218ENST00000497469 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
RNF220-218ENST00000497469 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
RNF220-218ENST00000497469 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
RNF220-218ENST00000497469 LRRC9Q6ZRR7 1453 aa23.94■■□□□ 1.42
RNF220-218ENST00000497469 SCAF11Q99590 1463 aaKnown RBP23.94■■□□□ 1.42
RNF220-218ENST00000497469 RGS12O14924 1447 aa23.93■■□□□ 1.42
RNF220-218ENST00000497469 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
RNF220-218ENST00000497469 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
RNF220-218ENST00000497469 KIF3BO15066 747 aa23.92■■□□□ 1.42
RNF220-218ENST00000497469 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
RNF220-218ENST00000497469 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
RNF220-218ENST00000497469 LTKP29376 864 aa23.9■■□□□ 1.42
RNF220-218ENST00000497469 NUTM2DQ5VT03 806 aaPredicted RBP23.9■■□□□ 1.42
RNF220-218ENST00000497469 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
RNF220-218ENST00000497469 SPATA31A6Q5VVP1 1343 aa23.89■■□□□ 1.42
RNF220-218ENST00000497469 GPATCH8Q9UKJ3 1502 aaKnown RBP23.88■■□□□ 1.41
RNF220-218ENST00000497469 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
RNF220-218ENST00000497469 KIAA1107Q9UPP5 1409 aa23.86■■□□□ 1.41
RNF220-218ENST00000497469 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
RNF220-218ENST00000497469 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
RNF220-218ENST00000497469 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
RNF220-218ENST00000497469 PROSER2Q86WR7 435 aaPredicted RBP23.84■■□□□ 1.41
RNF220-218ENST00000497469 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
RNF220-218ENST00000497469 AFF2P51816 1311 aa23.83■■□□□ 1.4
RNF220-218ENST00000497469 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
RNF220-218ENST00000497469 SLAIN2Q9P270 581 aa23.82■■□□□ 1.4
RNF220-218ENST00000497469 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
RNF220-218ENST00000497469 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
RNF220-218ENST00000497469 CFDP1Q9UEE9 299 aaPredicted RBP23.79■■□□□ 1.4
RNF220-218ENST00000497469 TIAM1Q13009 1591 aa23.78■■□□□ 1.4
RNF220-218ENST00000497469 MSH6P52701 1360 aa23.78■■□□□ 1.4
RNF220-218ENST00000497469 SHPRHQ149N8 1683 aa23.76■■□□□ 1.39
RNF220-218ENST00000497469 ERVK-7P63135 1459 aa23.76■■□□□ 1.39
RNF220-218ENST00000497469 ARHGAP23Q9P227 1491 aa23.76■■□□□ 1.39
RNF220-218ENST00000497469 FOXD1Q16676 465 aa23.76■■□□□ 1.39
RNF220-218ENST00000497469 PRDM15P57071 1507 aaPredicted RBP23.75■■□□□ 1.39
RNF220-218ENST00000497469 KCNA6P17658 529 aa23.75■■□□□ 1.39
RNF220-218ENST00000497469 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
RNF220-218ENST00000497469 CCDC18Q5T9S5 1454 aa23.75■■□□□ 1.39
RNF220-218ENST00000497469 SLIT1O75093 1534 aa23.74■■□□□ 1.39
RNF220-218ENST00000497469 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
RNF220-218ENST00000497469 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
RNF220-218ENST00000497469 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
RNF220-218ENST00000497469 QTRT2Q9H974 415 aaKnown RBP23.7■■□□□ 1.38
RNF220-218ENST00000497469 EID1Q9Y6B2 187 aa23.7■■□□□ 1.38
RNF220-218ENST00000497469 RTEL1-TNFRSF6BF6WH68 1400 aa23.69■■□□□ 1.38
RNF220-218ENST00000497469 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
RNF220-218ENST00000497469 ABCC3O15438 1527 aa23.67■■□□□ 1.38
RNF220-218ENST00000497469 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
RNF220-218ENST00000497469 NKTRP30414 1462 aaKnown RBP23.65■■□□□ 1.38
RNF220-218ENST00000497469 C8orf37Q96NL8 207 aa23.65■■□□□ 1.38
RNF220-218ENST00000497469 AHDC1Q5TGY3 1603 aaPredicted RBP23.65■■□□□ 1.38
RNF220-218ENST00000497469 EEA1Q15075 1411 aa23.65■■□□□ 1.38
RNF220-218ENST00000497469 UBTFP17480 764 aaKnown RBP23.64■■□□□ 1.37
RNF220-218ENST00000497469 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.37
RNF220-218ENST00000497469 DIP2AQ14689 1571 aa23.63■■□□□ 1.37
RNF220-218ENST00000497469 NWD1Q149M9 1564 aa23.63■■□□□ 1.37
RNF220-218ENST00000497469 CASKIN1Q8WXD9 1431 aa23.63■■□□□ 1.37
RNF220-218ENST00000497469 CFAP65Q6ZU64 1925 aaKnown RBP23.61■■□□□ 1.37
RNF220-218ENST00000497469 LRP5O75197 1615 aa23.59■■□□□ 1.37
RNF220-218ENST00000497469 TMEM2Q9UHN6 1383 aa23.59■■□□□ 1.37
RNF220-218ENST00000497469 EP400Q96L91 3159 aa23.58■■□□□ 1.36
RNF220-218ENST00000497469 TET3O43151 1660 aa23.56■■□□□ 1.36
RNF220-218ENST00000497469 PIK3C2BO00750 1634 aa23.55■■□□□ 1.36
RNF220-218ENST00000497469 CEP152O94986 1710 aa23.53■■□□□ 1.36
RNF220-218ENST00000497469 NGLY1Q96IV0 654 aa23.53■■□□□ 1.36
RNF220-218ENST00000497469 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
RNF220-218ENST00000497469 C14orf37Q86TY3 774 aa23.51■■□□□ 1.35
RNF220-218ENST00000497469 CCDC141Q6ZP82 1450 aa23.5■■□□□ 1.35
RNF220-218ENST00000497469 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms