RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 AGLP35573 1532 aa16.47■□□□□ 0.23
CCDC142-209ENST00000497232 HRCP23327 699 aa16.47■□□□□ 0.23
CCDC142-209ENST00000497232 EIF2AK4Q9P2K8 1649 aaKnown RBP16.45■□□□□ 0.22
CCDC142-209ENST00000497232 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
CCDC142-209ENST00000497232 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
CCDC142-209ENST00000497232 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
CCDC142-209ENST00000497232 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
CCDC142-209ENST00000497232 UNC13BO14795 1591 aa16.42■□□□□ 0.22
CCDC142-209ENST00000497232 VWDEQ8N2E2 1590 aa16.41■□□□□ 0.22
CCDC142-209ENST00000497232 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
CCDC142-209ENST00000497232 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
CCDC142-209ENST00000497232 PRDM15P57071 1507 aaPredicted RBP16.39■□□□□ 0.21
CCDC142-209ENST00000497232 PZPP20742 1482 aa16.35■□□□□ 0.21
CCDC142-209ENST00000497232 KIF3BO15066 747 aa16.35■□□□□ 0.21
CCDC142-209ENST00000497232 MSH5O43196 834 aa16.34■□□□□ 0.21
CCDC142-209ENST00000497232 IQGAP3Q86VI3 1631 aa16.34■□□□□ 0.21
CCDC142-209ENST00000497232 LMTK2Q8IWU2 1503 aa16.33■□□□□ 0.2
CCDC142-209ENST00000497232 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
CCDC142-209ENST00000497232 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
CCDC142-209ENST00000497232 ABCC3O15438 1527 aa16.29■□□□□ 0.2
CCDC142-209ENST00000497232 NUP155O75694 1391 aa16.29■□□□□ 0.2
CCDC142-209ENST00000497232 DHX57Q6P158 1386 aaKnown RBP16.29■□□□□ 0.2
CCDC142-209ENST00000497232 GGT6Q6P531 493 aa16.27■□□□□ 0.2
CCDC142-209ENST00000497232 ADAMTSL3P82987 1691 aa16.27■□□□□ 0.19
CCDC142-209ENST00000497232 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
CCDC142-209ENST00000497232 CEP152O94986 1710 aa16.25■□□□□ 0.19
CCDC142-209ENST00000497232 TET3O43151 1660 aa16.25■□□□□ 0.19
CCDC142-209ENST00000497232 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
CCDC142-209ENST00000497232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC142-209ENST00000497232 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
CCDC142-209ENST00000497232 ARHGAP31Q2M1Z3 1444 aa16.23■□□□□ 0.19
CCDC142-209ENST00000497232 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
CCDC142-209ENST00000497232 E9PCH4 1651 aa16.22■□□□□ 0.19
CCDC142-209ENST00000497232 KANK1Q14678 1352 aa16.22■□□□□ 0.19
CCDC142-209ENST00000497232 CAMSAP1Q5T5Y3 1602 aa16.22■□□□□ 0.19
CCDC142-209ENST00000497232 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
CCDC142-209ENST00000497232 ARID4BQ4LE39 1312 aaPredicted RBP16.21■□□□□ 0.19
CCDC142-209ENST00000497232 NPATQ14207 1427 aa16.21■□□□□ 0.19
CCDC142-209ENST00000497232 MLECQ14165 292 aa16.21■□□□□ 0.19
CCDC142-209ENST00000497232 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.18
CCDC142-209ENST00000497232 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
CCDC142-209ENST00000497232 MROH2AA6NES4 1674 aa16.2■□□□□ 0.18
CCDC142-209ENST00000497232 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
CCDC142-209ENST00000497232 PTPRTO14522 1441 aa16.19■□□□□ 0.18
CCDC142-209ENST00000497232 PKD2Q13563 968 aa16.19■□□□□ 0.18
CCDC142-209ENST00000497232 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
CCDC142-209ENST00000497232 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
CCDC142-209ENST00000497232 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
CCDC142-209ENST00000497232 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
CCDC142-209ENST00000497232 FER1L4A9Z1Z3 1794 aa16.18■□□□□ 0.18
CCDC142-209ENST00000497232 ZMYM3Q14202 1370 aa16.17■□□□□ 0.18
CCDC142-209ENST00000497232 NOS1P29475 1434 aa16.17■□□□□ 0.18
CCDC142-209ENST00000497232 KDM4FA0A1W2PPD8 638 aa16.14■□□□□ 0.17
CCDC142-209ENST00000497232 C3P01024 1663 aa16.14■□□□□ 0.17
CCDC142-209ENST00000497232 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
CCDC142-209ENST00000497232 SYNMO15061 1565 aa16.13■□□□□ 0.17
CCDC142-209ENST00000497232 RIMS1Q86UR5 1692 aaKnown RBP16.12■□□□□ 0.17
CCDC142-209ENST00000497232 PREX1Q8TCU6 1659 aa16.12■□□□□ 0.17
CCDC142-209ENST00000497232 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
CCDC142-209ENST00000497232 TRPM2O94759 1503 aa16.12■□□□□ 0.17
CCDC142-209ENST00000497232 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
CCDC142-209ENST00000497232 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
CCDC142-209ENST00000497232 SPHKAPQ2M3C7 1700 aa16.11■□□□□ 0.17
CCDC142-209ENST00000497232 PIK3C2BO00750 1634 aa16.09■□□□□ 0.17
CCDC142-209ENST00000497232 PTPRMP28827 1452 aa16.09■□□□□ 0.17
CCDC142-209ENST00000497232 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
CCDC142-209ENST00000497232 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
CCDC142-209ENST00000497232 CLTCL1P53675 1640 aa16.06■□□□□ 0.16
CCDC142-209ENST00000497232 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
CCDC142-209ENST00000497232 CCER1Q8TC90 406 aaPredicted RBP16.04■□□□□ 0.16
CCDC142-209ENST00000497232 SIN3AQ96ST3 1273 aa16.04■□□□□ 0.16
CCDC142-209ENST00000497232 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
CCDC142-209ENST00000497232 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.16
CCDC142-209ENST00000497232 NEURL4Q96JN8 1562 aa16.02■□□□□ 0.16
CCDC142-209ENST00000497232 TNRQ92752 1358 aa16.01■□□□□ 0.15
CCDC142-209ENST00000497232 IDI1Q13907 227 aa16.01■□□□□ 0.15
CCDC142-209ENST00000497232 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
CCDC142-209ENST00000497232 ADGRB3O60242 1522 aa15.99■□□□□ 0.15
CCDC142-209ENST00000497232 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
CCDC142-209ENST00000497232 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
CCDC142-209ENST00000497232 SETD1BQ9UPS6 1966 aaKnown RBP15.98■□□□□ 0.15
CCDC142-209ENST00000497232 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
CCDC142-209ENST00000497232 MYO3AQ8NEV4 1616 aa15.97■□□□□ 0.15
CCDC142-209ENST00000497232 KDM5AP29375 1690 aaKnown RBP15.96■□□□□ 0.15
CCDC142-209ENST00000497232 A2ML1A8K2U0 1454 aa15.95■□□□□ 0.14
CCDC142-209ENST00000497232 ZNF142P52746 1687 aaPredicted RBP15.94■□□□□ 0.14
CCDC142-209ENST00000497232 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
CCDC142-209ENST00000497232 KIF1BO60333 1816 aa15.93■□□□□ 0.14
CCDC142-209ENST00000497232 MYO5BQ9ULV0 1848 aa15.93■□□□□ 0.14
CCDC142-209ENST00000497232 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
CCDC142-209ENST00000497232 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
CCDC142-209ENST00000497232 IFT172Q9UG01 1749 aa15.91■□□□□ 0.14
CCDC142-209ENST00000497232 TIMELESSQ9UNS1 1208 aa15.9■□□□□ 0.14
CCDC142-209ENST00000497232 NEXMIFQ5QGS0 1516 aa15.89■□□□□ 0.13
CCDC142-209ENST00000497232 ZFYVE9O95405 1425 aa15.89■□□□□ 0.13
CCDC142-209ENST00000497232 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
CCDC142-209ENST00000497232 ARHGAP23Q9P227 1491 aa15.89■□□□□ 0.13
CCDC142-209ENST00000497232 SLIT1O75093 1534 aa15.88■□□□□ 0.13
CCDC142-209ENST00000497232 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
CCDC142-209ENST00000497232 PPLO60437 1756 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms