RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
CPS1-208ENST00000497121 ADGBQ8N7X0 1667 aa11.5□□□□□ -0.57
CPS1-208ENST00000497121 MROH2AA6NES4 1674 aa11.49□□□□□ -0.57
CPS1-208ENST00000497121 RRP7BPQ9NSQ0 103 aa11.49□□□□□ -0.57
CPS1-208ENST00000497121 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
CPS1-208ENST00000497121 TNRQ92752 1358 aa11.48□□□□□ -0.57
CPS1-208ENST00000497121 KIF15Q9NS87 1388 aa11.48□□□□□ -0.57
CPS1-208ENST00000497121 DAPK1P53355 1430 aa11.48□□□□□ -0.57
CPS1-208ENST00000497121 PZPP20742 1482 aa11.48□□□□□ -0.57
CPS1-208ENST00000497121 CLTCQ00610 1675 aaKnown RBP11.47□□□□□ -0.57
CPS1-208ENST00000497121 FAM135AQ9P2D6 1515 aa11.47□□□□□ -0.57
CPS1-208ENST00000497121 SHANK2Q9UPX8 1470 aa11.47□□□□□ -0.57
CPS1-208ENST00000497121 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
CPS1-208ENST00000497121 STRCQ7RTU9 1775 aa11.46□□□□□ -0.57
CPS1-208ENST00000497121 KDM5DQ9BY66 1539 aa11.46□□□□□ -0.57
CPS1-208ENST00000497121 PKD2Q13563 968 aa11.46□□□□□ -0.57
CPS1-208ENST00000497121 A2ML1A8K2U0 1454 aa11.45□□□□□ -0.58
CPS1-208ENST00000497121 CAMSAP1Q5T5Y3 1602 aa11.45□□□□□ -0.58
CPS1-208ENST00000497121 PTPN23Q9H3S7 1636 aa11.45□□□□□ -0.58
CPS1-208ENST00000497121 ABCC3O15438 1527 aa11.45□□□□□ -0.58
CPS1-208ENST00000497121 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
CPS1-208ENST00000497121 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
CPS1-208ENST00000497121 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
CPS1-208ENST00000497121 ANKRD30AQ9BXX3 1397 aa11.43□□□□□ -0.58
CPS1-208ENST00000497121 MROH1Q8NDA8 1641 aa11.43□□□□□ -0.58
CPS1-208ENST00000497121 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
CPS1-208ENST00000497121 RNF17Q9BXT8 1623 aaKnown RBP11.42□□□□□ -0.58
CPS1-208ENST00000497121 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
CPS1-208ENST00000497121 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
CPS1-208ENST00000497121 LTBP4Q8N2S1 1624 aa11.41□□□□□ -0.58
CPS1-208ENST00000497121 MYO3AQ8NEV4 1616 aa11.41□□□□□ -0.58
CPS1-208ENST00000497121 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
CPS1-208ENST00000497121 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
CPS1-208ENST00000497121 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
CPS1-208ENST00000497121 ERVK-7P63135 1459 aa11.4□□□□□ -0.58
CPS1-208ENST00000497121 NLRP1Q9C000 1473 aa11.4□□□□□ -0.58
CPS1-208ENST00000497121 DNMT1P26358 1616 aaKnown RBP11.4□□□□□ -0.58
CPS1-208ENST00000497121 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
CPS1-208ENST00000497121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPS1-208ENST00000497121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.4□□□□□ -0.59
CPS1-208ENST00000497121 EIF2AK4Q9P2K8 1649 aaKnown RBP11.39□□□□□ -0.59
CPS1-208ENST00000497121 SPATA31D1Q6ZQQ2 1576 aa11.38□□□□□ -0.59
CPS1-208ENST00000497121 ANKLE2Q86XL3 938 aa11.38□□□□□ -0.59
CPS1-208ENST00000497121 ZNF142P52746 1687 aaPredicted RBP11.37□□□□□ -0.59
CPS1-208ENST00000497121 PRDM15P57071 1507 aaPredicted RBP11.37□□□□□ -0.59
CPS1-208ENST00000497121 ANKRD50Q9ULJ7 1429 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 KANK1Q14678 1352 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 VWDEQ8N2E2 1590 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 CROCC2H7BZ55 1655 aa11.35□□□□□ -0.59
CPS1-208ENST00000497121 UGGT1Q9NYU2 1555 aa11.34□□□□□ -0.59
CPS1-208ENST00000497121 MED14O60244 1454 aa11.34□□□□□ -0.59
CPS1-208ENST00000497121 LTKP29376 864 aa11.34□□□□□ -0.59
CPS1-208ENST00000497121 IDI1Q13907 227 aa11.34□□□□□ -0.59
CPS1-208ENST00000497121 NEURL4Q96JN8 1562 aa11.33□□□□□ -0.6
CPS1-208ENST00000497121 NPHP4O75161 1426 aaPredicted RBP11.33□□□□□ -0.6
CPS1-208ENST00000497121 NOS1P29475 1434 aa11.33□□□□□ -0.6
CPS1-208ENST00000497121 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
CPS1-208ENST00000497121 DEPDC5O75140 1603 aa11.32□□□□□ -0.6
CPS1-208ENST00000497121 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
CPS1-208ENST00000497121 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
CPS1-208ENST00000497121 ITGAEP38570 1179 aa11.3□□□□□ -0.6
CPS1-208ENST00000497121 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
CPS1-208ENST00000497121 TMEM2Q9UHN6 1383 aa11.29□□□□□ -0.6
CPS1-208ENST00000497121 SLC52A1Q9NWF4 448 aa11.29□□□□□ -0.6
CPS1-208ENST00000497121 RRBP1Q9P2E9 1410 aaKnown RBP11.28□□□□□ -0.6
CPS1-208ENST00000497121 SLIT1O75093 1534 aa11.28□□□□□ -0.6
CPS1-208ENST00000497121 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.6
CPS1-208ENST00000497121 CEP152O94986 1710 aa11.27□□□□□ -0.61
CPS1-208ENST00000497121 EFCAB6Q5THR3 1501 aa11.27□□□□□ -0.61
CPS1-208ENST00000497121 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.61
CPS1-208ENST00000497121 NUP155O75694 1391 aa11.26□□□□□ -0.61
CPS1-208ENST00000497121 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
CPS1-208ENST00000497121 SYNMO15061 1565 aa11.25□□□□□ -0.61
CPS1-208ENST00000497121 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
CPS1-208ENST00000497121 EID1Q9Y6B2 187 aa11.25□□□□□ -0.61
CPS1-208ENST00000497121 CPS1P31327 1500 aa11.24□□□□□ -0.61
CPS1-208ENST00000497121 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
CPS1-208ENST00000497121 PIK3C2BO00750 1634 aa11.21□□□□□ -0.61
CPS1-208ENST00000497121 UNC13BO14795 1591 aa11.21□□□□□ -0.61
CPS1-208ENST00000497121 LRRC7Q96NW7 1537 aa11.21□□□□□ -0.61
CPS1-208ENST00000497121 NAIPQ13075 1403 aa11.21□□□□□ -0.61
CPS1-208ENST00000497121 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
CPS1-208ENST00000497121 ZFYVE9O95405 1425 aa11.2□□□□□ -0.62
CPS1-208ENST00000497121 TOM1O60784 492 aa11.2□□□□□ -0.62
CPS1-208ENST00000497121 KCNA6P17658 529 aa11.2□□□□□ -0.62
CPS1-208ENST00000497121 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
CPS1-208ENST00000497121 TET3O43151 1660 aa11.19□□□□□ -0.62
CPS1-208ENST00000497121 IQGAP1P46940 1657 aa11.19□□□□□ -0.62
CPS1-208ENST00000497121 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
CPS1-208ENST00000497121 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
CPS1-208ENST00000497121 CFAP65Q6ZU64 1925 aaKnown RBP11.18□□□□□ -0.62
CPS1-208ENST00000497121 HSPA1LP34931 641 aa11.18□□□□□ -0.62
CPS1-208ENST00000497121 RIMS2Q9UQ26 1411 aa11.18□□□□□ -0.62
CPS1-208ENST00000497121 PLEKHG1Q9ULL1 1385 aa11.17□□□□□ -0.62
CPS1-208ENST00000497121 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
CPS1-208ENST00000497121 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
CPS1-208ENST00000497121 HFM1A2PYH4 1435 aa11.17□□□□□ -0.62
CPS1-208ENST00000497121 HDGFP51858 240 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms