RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 DEPDC5O75140 1603 aa27.15■■□□□ 1.94
RGP1-202ENST00000496906 RNF17Q9BXT8 1623 aaKnown RBP27.14■■□□□ 1.94
RGP1-202ENST00000496906 MROH1Q8NDA8 1641 aa27.12■■□□□ 1.93
RGP1-202ENST00000496906 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
RGP1-202ENST00000496906 KDM5DQ9BY66 1539 aa27.11■■□□□ 1.93
RGP1-202ENST00000496906 TRIM52Q96A61 297 aa27.1■■□□□ 1.93
RGP1-202ENST00000496906 NUP155O75694 1391 aa27.09■■□□□ 1.93
RGP1-202ENST00000496906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.06■■□□□ 1.929e-7■□□□□ 8.9
RGP1-202ENST00000496906 GGT6Q6P531 493 aa27.05■■□□□ 1.92
RGP1-202ENST00000496906 PZPP20742 1482 aa27.05■■□□□ 1.92
RGP1-202ENST00000496906 VWDEQ8N2E2 1590 aa27.05■■□□□ 1.92
RGP1-202ENST00000496906 IQGAP3Q86VI3 1631 aa27.04■■□□□ 1.92
RGP1-202ENST00000496906 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
RGP1-202ENST00000496906 FAM135AQ9P2D6 1515 aa27.03■■□□□ 1.92
RGP1-202ENST00000496906 KANK1Q14678 1352 aa27.02■■□□□ 1.92
RGP1-202ENST00000496906 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
RGP1-202ENST00000496906 MPHOSPH9Q99550 1183 aa26.99■■□□□ 1.91
RGP1-202ENST00000496906 MLECQ14165 292 aa26.97■■□□□ 1.91
RGP1-202ENST00000496906 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
RGP1-202ENST00000496906 LMTK2Q8IWU2 1503 aa26.97■■□□□ 1.91
RGP1-202ENST00000496906 PPP6R1Q9UPN7 881 aa26.97■■□□□ 1.91
RGP1-202ENST00000496906 ABCC3O15438 1527 aa26.96■■□□□ 1.91
RGP1-202ENST00000496906 ZC3H13Q5T200 1668 aaKnown RBP26.94■■□□□ 1.9
RGP1-202ENST00000496906 WASHC2CQ9Y4E1 1318 aa26.94■■□□□ 1.9
RGP1-202ENST00000496906 CEP152O94986 1710 aa26.93■■□□□ 1.9
RGP1-202ENST00000496906 TET3O43151 1660 aa26.92■■□□□ 1.9
RGP1-202ENST00000496906 PKD2Q13563 968 aa26.89■■□□□ 1.9
RGP1-202ENST00000496906 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.9
RGP1-202ENST00000496906 CCER1Q8TC90 406 aaPredicted RBP26.87■■□□□ 1.89
RGP1-202ENST00000496906 CAMSAP1Q5T5Y3 1602 aa26.87■■□□□ 1.89
RGP1-202ENST00000496906 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
RGP1-202ENST00000496906 FOXD1Q16676 465 aa26.84■■□□□ 1.89
RGP1-202ENST00000496906 E9PCH4 1651 aa26.84■■□□□ 1.89
RGP1-202ENST00000496906 CNTLNQ9NXG0 1405 aa26.84■■□□□ 1.89
RGP1-202ENST00000496906 NPATQ14207 1427 aa26.83■■□□□ 1.89
RGP1-202ENST00000496906 ARHGAP31Q2M1Z3 1444 aa26.83■■□□□ 1.89
RGP1-202ENST00000496906 ESF1Q9H501 851 aaKnown RBP26.82■■□□□ 1.88
RGP1-202ENST00000496906 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
RGP1-202ENST00000496906 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
RGP1-202ENST00000496906 ADAMTSL3P82987 1691 aa26.8■■□□□ 1.88
RGP1-202ENST00000496906 CLSPNQ9HAW4 1339 aa26.79■■□□□ 1.88
RGP1-202ENST00000496906 MADDQ8WXG6 1647 aa26.78■■□□□ 1.88
RGP1-202ENST00000496906 ANKRD30BQ9BXX2 1392 aa26.78■■□□□ 1.88
RGP1-202ENST00000496906 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
RGP1-202ENST00000496906 ZMYM3Q14202 1370 aa26.76■■□□□ 1.87
RGP1-202ENST00000496906 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
RGP1-202ENST00000496906 PTPRTO14522 1441 aa26.74■■□□□ 1.87
RGP1-202ENST00000496906 KDM4FA0A1W2PPD8 638 aa26.74■■□□□ 1.87
RGP1-202ENST00000496906 SPHKAPQ2M3C7 1700 aa26.71■■□□□ 1.87
RGP1-202ENST00000496906 NOS1P29475 1434 aa26.71■■□□□ 1.87
RGP1-202ENST00000496906 TRPM2O94759 1503 aa26.7■■□□□ 1.86
RGP1-202ENST00000496906 RIMS1Q86UR5 1692 aaKnown RBP26.7■■□□□ 1.86
RGP1-202ENST00000496906 ERVK-7P63135 1459 aa26.69■■□□□ 1.86
RGP1-202ENST00000496906 PREX1Q8TCU6 1659 aa26.68■■□□□ 1.86
RGP1-202ENST00000496906 C3P01024 1663 aa26.67■■□□□ 1.86
RGP1-202ENST00000496906 FBXO31Q5XUX0 539 aaPredicted RBP26.67■■□□□ 1.86
RGP1-202ENST00000496906 SPATA31D1Q6ZQQ2 1576 aa26.67■■□□□ 1.86
RGP1-202ENST00000496906 CFAP65Q6ZU64 1925 aaKnown RBP26.64■■□□□ 1.86
RGP1-202ENST00000496906 SIN3AQ96ST3 1273 aa26.64■■□□□ 1.86
RGP1-202ENST00000496906 CCDC144AA2RUR9 1427 aa26.64■■□□□ 1.86
RGP1-202ENST00000496906 SYNMO15061 1565 aa26.64■■□□□ 1.86
RGP1-202ENST00000496906 CEBPAP49715 358 aaPredicted RBP26.63■■□□□ 1.85
RGP1-202ENST00000496906 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
RGP1-202ENST00000496906 UGGT1Q9NYU2 1555 aa26.6■■□□□ 1.85
RGP1-202ENST00000496906 PTPRMP28827 1452 aa26.59■■□□□ 1.85
RGP1-202ENST00000496906 PIK3C2BO00750 1634 aa26.58■■□□□ 1.84
RGP1-202ENST00000496906 NEUROD1Q13562 356 aa26.57■■□□□ 1.84
RGP1-202ENST00000496906 TNRQ92752 1358 aa26.57■■□□□ 1.84
RGP1-202ENST00000496906 PLPPR3Q6T4P5 718 aa26.54■■□□□ 1.84
RGP1-202ENST00000496906 SLC52A1Q9NWF4 448 aa26.54■■□□□ 1.84
RGP1-202ENST00000496906 IDI1Q13907 227 aa26.51■■□□□ 1.83
RGP1-202ENST00000496906 SPATA31E1Q6ZUB1 1445 aa26.49■■□□□ 1.83
RGP1-202ENST00000496906 NEURL4Q96JN8 1562 aa26.48■■□□□ 1.83
RGP1-202ENST00000496906 NLRP1Q9C000 1473 aa26.47■■□□□ 1.83
RGP1-202ENST00000496906 ADGRB3O60242 1522 aa26.46■■□□□ 1.83
RGP1-202ENST00000496906 TONSLQ96HA7 1378 aa26.45■■□□□ 1.83
RGP1-202ENST00000496906 KIF1BO60333 1816 aa26.45■■□□□ 1.82
RGP1-202ENST00000496906 MYO3AQ8NEV4 1616 aa26.44■■□□□ 1.82
RGP1-202ENST00000496906 TIMELESSQ9UNS1 1208 aa26.43■■□□□ 1.82
RGP1-202ENST00000496906 TMEM131LA2VDJ0 1609 aa26.42■■□□□ 1.82
RGP1-202ENST00000496906 CHGAP10645 457 aaKnown RBP26.41■■□□□ 1.82
RGP1-202ENST00000496906 SETD1BQ9UPS6 1966 aaKnown RBP26.4■■□□□ 1.82
RGP1-202ENST00000496906 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
RGP1-202ENST00000496906 L3MBTL2Q969R5 705 aa26.39■■□□□ 1.82
RGP1-202ENST00000496906 ZEB1P37275 1124 aaPredicted RBP26.38■■□□□ 1.81
RGP1-202ENST00000496906 A2ML1A8K2U0 1454 aa26.37■■□□□ 1.81
RGP1-202ENST00000496906 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
RGP1-202ENST00000496906 STAG3Q9UJ98 1225 aa26.36■■□□□ 1.81
RGP1-202ENST00000496906 CEP170BQ9Y4F5 1589 aaPredicted RBP26.36■■□□□ 1.81
RGP1-202ENST00000496906 UBR1Q8IWV7 1749 aa26.35■■□□□ 1.81
RGP1-202ENST00000496906 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
RGP1-202ENST00000496906 MYO5BQ9ULV0 1848 aa26.34■■□□□ 1.81
RGP1-202ENST00000496906 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.81
RGP1-202ENST00000496906 ZNF326Q5BKZ1 582 aaKnown RBP26.33■■□□□ 1.8
RGP1-202ENST00000496906 DCAF11Q8TEB1 546 aa26.3■■□□□ 1.8
RGP1-202ENST00000496906 RPGRIP1LQ68CZ1 1315 aa26.3■■□□□ 1.8
RGP1-202ENST00000496906 NEXMIFQ5QGS0 1516 aa26.29■■□□□ 1.8
RGP1-202ENST00000496906 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
RGP1-202ENST00000496906 IFT172Q9UG01 1749 aa26.29■■□□□ 1.8
RGP1-202ENST00000496906 PPP1R15AO75807 674 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms