RNA–Protein interactions for RNA: ENST00000496866.1

RAB34-218, Transcript of RAB34, member RAS oncogene family, human

TSL 3

Gene RAB34, Length 434 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB34-218	ENST00000496866	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.92	□□□□□ -0.18
RAB34-218	ENST00000496866	A2ML1	A8K2U0	1454 aa		13.92	□□□□□ -0.18
RAB34-218	ENST00000496866	SYCP2	Q9BX26	1530 aa		13.91	□□□□□ -0.18
RAB34-218	ENST00000496866	ATP7A	Q04656	1500 aa		13.9	□□□□□ -0.18
RAB34-218	ENST00000496866	DNMT1	P26358	1616 aa	Known RBP	13.9	□□□□□ -0.18
RAB34-218	ENST00000496866	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.9	□□□□□ -0.18
RAB34-218	ENST00000496866	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.89	□□□□□ -0.19
RAB34-218	ENST00000496866	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.88	□□□□□ -0.19
RAB34-218	ENST00000496866	POLR1A	O95602	1720 aa	Predicted RBP	13.87	□□□□□ -0.19
RAB34-218	ENST00000496866	PLXNC1	O60486	1568 aa		13.87	□□□□□ -0.19
RAB34-218	ENST00000496866	TNR	Q92752	1358 aa		13.86	□□□□□ -0.19
RAB34-218	ENST00000496866	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RAB34-218	ENST00000496866	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.86	□□□□□ -0.19
RAB34-218	ENST00000496866	KIAA1107	Q9UPP5	1409 aa		13.85	□□□□□ -0.19
RAB34-218	ENST00000496866	NCOA2	Q15596	1464 aa		13.85	□□□□□ -0.19
RAB34-218	ENST00000496866	PLEKHH2	Q8IVE3	1493 aa		13.85	□□□□□ -0.19
RAB34-218	ENST00000496866	CCNB3	Q8WWL7	1395 aa		13.84	□□□□□ -0.19
RAB34-218	ENST00000496866	NEURL4	Q96JN8	1562 aa		13.84	□□□□□ -0.19
RAB34-218	ENST00000496866	INO80	Q9ULG1	1556 aa	Predicted RBP	13.83	□□□□□ -0.19
RAB34-218	ENST00000496866	MYOM3	Q5VTT5	1437 aa		13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	MIA2	Q96PC5	1412 aa		13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	RRBP1	Q9P2E9	1410 aa	Known RBP	13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	KIF3B	O15066	747 aa		13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	PCGF6	Q9BYE7	350 aa		13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	RGS17	Q9UGC6	210 aa	Predicted RBP	13.83	□□□□□ -0.2
RAB34-218	ENST00000496866	NPHP4	O75161	1426 aa	Predicted RBP	13.82	□□□□□ -0.2
RAB34-218	ENST00000496866	ADGB	Q8N7X0	1667 aa		13.82	□□□□□ -0.2
RAB34-218	ENST00000496866	VWDE	Q8N2E2	1590 aa		13.82	□□□□□ -0.2
RAB34-218	ENST00000496866	WASHC2C	Q9Y4E1	1318 aa		13.82	□□□□□ -0.2
RAB34-218	ENST00000496866	ALK	Q9UM73	1620 aa		13.81	□□□□□ -0.2
RAB34-218	ENST00000496866	ZNF644	Q9H582	1327 aa	Predicted RBP	13.8	□□□□□ -0.2
RAB34-218	ENST00000496866	DHX29	Q7Z478	1369 aa	Known RBP	13.8	□□□□□ -0.2
RAB34-218	ENST00000496866	FAM135A	Q9P2D6	1515 aa		13.79	□□□□□ -0.2
RAB34-218	ENST00000496866	FGD6	Q6ZV73	1430 aa		13.78	□□□□□ -0.2
RAB34-218	ENST00000496866	MED14	O60244	1454 aa		13.78	□□□□□ -0.2
RAB34-218	ENST00000496866	UGGT1	Q9NYU2	1555 aa		13.78	□□□□□ -0.2
RAB34-218	ENST00000496866	PZP	P20742	1482 aa		13.77	□□□□□ -0.21
RAB34-218	ENST00000496866	LRRC7	Q96NW7	1537 aa		13.77	□□□□□ -0.21
RAB34-218	ENST00000496866	FAM50A	Q14320	339 aa	Known RBP	13.76	□□□□□ -0.21
RAB34-218	ENST00000496866	DEPDC5	O75140	1603 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	NLRP1	Q9C000	1473 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	RSPH4A	Q5TD94	716 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	POTEA	Q6S8J7	498 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	IQGAP1	P46940	1657 aa		13.75	□□□□□ -0.21
RAB34-218	ENST00000496866	KDM5D	Q9BY66	1539 aa		13.74	□□□□□ -0.21
RAB34-218	ENST00000496866	STRCP1	A6NGW2	1772 aa		13.74	□□□□□ -0.21
RAB34-218	ENST00000496866	ACIN1	Q9UKV3	1341 aa	Known RBP	13.73	□□□□□ -0.21
RAB34-218	ENST00000496866	RNF17	Q9BXT8	1623 aa	Known RBP	13.73	□□□□□ -0.21
RAB34-218	ENST00000496866	MBD5	Q9P267	1494 aa		13.72	□□□□□ -0.21
RAB34-218	ENST00000496866	SYNM	O15061	1565 aa		13.7	□□□□□ -0.22
RAB34-218	ENST00000496866	TXNDC2	Q86VQ3	553 aa		13.68	□□□□□ -0.22
RAB34-218	ENST00000496866	PTPN23	Q9H3S7	1636 aa		13.68	□□□□□ -0.22
RAB34-218	ENST00000496866	TSPY4	P0CV99	314 aa		13.67	□□□□□ -0.22
RAB34-218	ENST00000496866	TSPY10	P0CW01	314 aa		13.67	□□□□□ -0.22
RAB34-218	ENST00000496866	FAM135B	Q49AJ0	1406 aa		13.66	□□□□□ -0.22
RAB34-218	ENST00000496866	LTK	P29376	864 aa		13.66	□□□□□ -0.22
RAB34-218	ENST00000496866	CFAP65	Q6ZU64	1925 aa	Known RBP	13.65	□□□□□ -0.22
RAB34-218	ENST00000496866	EID1	Q9Y6B2	187 aa		13.65	□□□□□ -0.22
RAB34-218	ENST00000496866	CCDC141	Q6ZP82	1450 aa		13.64	□□□□□ -0.23
RAB34-218	ENST00000496866	SCAF11	Q99590	1463 aa	Known RBP	13.63	□□□□□ -0.23
RAB34-218	ENST00000496866	HRC	P23327	699 aa		13.63	□□□□□ -0.23
RAB34-218	ENST00000496866	ITGAE	P38570	1179 aa		13.63	□□□□□ -0.23
RAB34-218	ENST00000496866	ZC3H13	Q5T200	1668 aa	Known RBP	13.63	□□□□□ -0.23
RAB34-218	ENST00000496866	XIRP1	Q702N8	1843 aa	Known RBP	13.62	□□□□□ -0.23
RAB34-218	ENST00000496866	CAMSAP2	Q08AD1	1489 aa		13.62	□□□□□ -0.23
RAB34-218	ENST00000496866	PROSER2	Q86WR7	435 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB34-218	ENST00000496866	ERVK-7	P63135	1459 aa		13.61	□□□□□ -0.23
RAB34-218	ENST00000496866	ROCK1	Q13464	1354 aa		13.6	□□□□□ -0.23
RAB34-218	ENST00000496866	SETD1A	O15047	1707 aa	Known RBP	13.6	□□□□□ -0.23
RAB34-218	ENST00000496866	RBM33	Q96EV2	1170 aa	Known RBP	13.6	□□□□□ -0.23
RAB34-218	ENST00000496866	STAG3	Q9UJ98	1225 aa		13.6	□□□□□ -0.23
RAB34-218	ENST00000496866	TMEM94	Q12767	1356 aa		13.59	□□□□□ -0.23
RAB34-218	ENST00000496866	UBR1	Q8IWV7	1749 aa		13.59	□□□□□ -0.23
RAB34-218	ENST00000496866	DAPK1	P53355	1430 aa		13.59	□□□□□ -0.23
RAB34-218	ENST00000496866	ABCC3	O15438	1527 aa		13.59	□□□□□ -0.23
RAB34-218	ENST00000496866	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
RAB34-218	ENST00000496866	ROBO1	Q9Y6N7	1651 aa		13.58	□□□□□ -0.24
RAB34-218	ENST00000496866	ARHGEF5	Q12774	1597 aa		13.58	□□□□□ -0.24
RAB34-218	ENST00000496866	ANKRD30A	Q9BXX3	1397 aa		13.58	□□□□□ -0.24
RAB34-218	ENST00000496866	KCNA6	P17658	529 aa		13.57	□□□□□ -0.24
RAB34-218	ENST00000496866	SETD5	Q9C0A6	1442 aa		13.56	□□□□□ -0.24
RAB34-218	ENST00000496866	TRIM52	Q96A61	297 aa		13.56	□□□□□ -0.24
RAB34-218	ENST00000496866	SLC26A8	Q96RN1	970 aa		13.56	□□□□□ -0.24
RAB34-218	ENST00000496866	HFM1	A2PYH4	1435 aa		13.56	□□□□□ -0.24
RAB34-218	ENST00000496866	ABCC5	O15440	1437 aa		13.56	□□□□□ -0.24
RAB34-218	ENST00000496866	ARHGAP23	Q9P227	1491 aa		13.55	□□□□□ -0.24
RAB34-218	ENST00000496866	SLIT1	O75093	1534 aa		13.55	□□□□□ -0.24
RAB34-218	ENST00000496866	MEX3C	Q5U5Q3	659 aa	Known RBP	13.55	□□□□□ -0.24
RAB34-218	ENST00000496866	SLAIN2	Q9P270	581 aa		13.55	□□□□□ -0.24
RAB34-218	ENST00000496866	BCAN	Q96GW7	911 aa		13.54	□□□□□ -0.24
RAB34-218	ENST00000496866	JCAD	Q9P266	1359 aa		13.54	□□□□□ -0.24
RAB34-218	ENST00000496866	ZNF772	Q68DY9	489 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB34-218	ENST00000496866	TMEM2	Q9UHN6	1383 aa		13.53	□□□□□ -0.24
RAB34-218	ENST00000496866	CEP152	O94986	1710 aa		13.53	□□□□□ -0.24
RAB34-218	ENST00000496866	MSH6	P52701	1360 aa		13.52	□□□□□ -0.25
RAB34-218	ENST00000496866	ADGRL2	O95490	1459 aa		13.52	□□□□□ -0.25
RAB34-218	ENST00000496866	PHLPP1	O60346	1717 aa		13.52	□□□□□ -0.25
RAB34-218	ENST00000496866	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
RAB34-218	ENST00000496866	CHIC2	Q9UKJ5	165 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms