RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 HRCP23327 699 aa20.83■□□□□ 0.93
ATPAF2-208ENST00000496852 PRDM15P57071 1507 aaPredicted RBP20.83■□□□□ 0.93
ATPAF2-208ENST00000496852 KIF3BO15066 747 aa20.81■□□□□ 0.92
ATPAF2-208ENST00000496852 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
ATPAF2-208ENST00000496852 KDM5DQ9BY66 1539 aa20.8■□□□□ 0.92
ATPAF2-208ENST00000496852 CEP152O94986 1710 aa20.79■□□□□ 0.92
ATPAF2-208ENST00000496852 VWDEQ8N2E2 1590 aa20.79■□□□□ 0.92
ATPAF2-208ENST00000496852 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.92
ATPAF2-208ENST00000496852 ZC3H13Q5T200 1668 aaKnown RBP20.77■□□□□ 0.92
ATPAF2-208ENST00000496852 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
ATPAF2-208ENST00000496852 PZPP20742 1482 aa20.73■□□□□ 0.91
ATPAF2-208ENST00000496852 TET3O43151 1660 aa20.73■□□□□ 0.91
ATPAF2-208ENST00000496852 NUP155O75694 1391 aa20.72■□□□□ 0.91
ATPAF2-208ENST00000496852 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
ATPAF2-208ENST00000496852 CLTCQ00610 1675 aaKnown RBP20.72■□□□□ 0.91
ATPAF2-208ENST00000496852 GGT6Q6P531 493 aa20.72■□□□□ 0.91
ATPAF2-208ENST00000496852 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
ATPAF2-208ENST00000496852 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
ATPAF2-208ENST00000496852 CAMSAP1Q5T5Y3 1602 aa20.71■□□□□ 0.91
ATPAF2-208ENST00000496852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.91
ATPAF2-208ENST00000496852 LMTK2Q8IWU2 1503 aa20.7■□□□□ 0.9
ATPAF2-208ENST00000496852 ABCC3O15438 1527 aa20.7■□□□□ 0.9
ATPAF2-208ENST00000496852 KANK1Q14678 1352 aa20.69■□□□□ 0.9
ATPAF2-208ENST00000496852 E9PCH4 1651 aa20.69■□□□□ 0.9
ATPAF2-208ENST00000496852 ADAMTSL3P82987 1691 aa20.69■□□□□ 0.9
ATPAF2-208ENST00000496852 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
ATPAF2-208ENST00000496852 CFAP65Q6ZU64 1925 aaKnown RBP20.67■□□□□ 0.9
ATPAF2-208ENST00000496852 DHX57Q6P158 1386 aaKnown RBP20.66■□□□□ 0.9
ATPAF2-208ENST00000496852 MLECQ14165 292 aa20.66■□□□□ 0.9
ATPAF2-208ENST00000496852 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
ATPAF2-208ENST00000496852 EFCAB6Q5THR3 1501 aa20.66■□□□□ 0.9
ATPAF2-208ENST00000496852 MADDQ8WXG6 1647 aa20.64■□□□□ 0.89
ATPAF2-208ENST00000496852 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
ATPAF2-208ENST00000496852 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
ATPAF2-208ENST00000496852 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
ATPAF2-208ENST00000496852 RIMS1Q86UR5 1692 aaKnown RBP20.62■□□□□ 0.89
ATPAF2-208ENST00000496852 SPHKAPQ2M3C7 1700 aa20.6■□□□□ 0.89
ATPAF2-208ENST00000496852 C3P01024 1663 aa20.59■□□□□ 0.89
ATPAF2-208ENST00000496852 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
ATPAF2-208ENST00000496852 ARHGAP31Q2M1Z3 1444 aa20.58■□□□□ 0.88
ATPAF2-208ENST00000496852 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
ATPAF2-208ENST00000496852 RPRD2Q5VT52 1461 aaKnown RBP20.57■□□□□ 0.88
ATPAF2-208ENST00000496852 PKD2Q13563 968 aa20.57■□□□□ 0.88
ATPAF2-208ENST00000496852 NPATQ14207 1427 aa20.56■□□□□ 0.88
ATPAF2-208ENST00000496852 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
ATPAF2-208ENST00000496852 FOXD1Q16676 465 aa20.52■□□□□ 0.88
ATPAF2-208ENST00000496852 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
ATPAF2-208ENST00000496852 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
ATPAF2-208ENST00000496852 PTPRTO14522 1441 aa20.49■□□□□ 0.87
ATPAF2-208ENST00000496852 TRPM2O94759 1503 aa20.49■□□□□ 0.87
ATPAF2-208ENST00000496852 PLA2R1Q13018 1463 aa20.49■□□□□ 0.87
ATPAF2-208ENST00000496852 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
ATPAF2-208ENST00000496852 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
ATPAF2-208ENST00000496852 SYNMO15061 1565 aa20.48■□□□□ 0.87
ATPAF2-208ENST00000496852 NOS1P29475 1434 aa20.48■□□□□ 0.87
ATPAF2-208ENST00000496852 ERVK-7P63135 1459 aa20.48■□□□□ 0.87
ATPAF2-208ENST00000496852 PIK3C2BO00750 1634 aa20.47■□□□□ 0.87
ATPAF2-208ENST00000496852 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
ATPAF2-208ENST00000496852 CLTCL1P53675 1640 aa20.46■□□□□ 0.87
ATPAF2-208ENST00000496852 KIF1BO60333 1816 aa20.45■□□□□ 0.86
ATPAF2-208ENST00000496852 PTPRMP28827 1452 aa20.44■□□□□ 0.86
ATPAF2-208ENST00000496852 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
ATPAF2-208ENST00000496852 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
ATPAF2-208ENST00000496852 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
ATPAF2-208ENST00000496852 MYO5BQ9ULV0 1848 aa20.41■□□□□ 0.86
ATPAF2-208ENST00000496852 KDM4FA0A1W2PPD8 638 aa20.41■□□□□ 0.86
ATPAF2-208ENST00000496852 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
ATPAF2-208ENST00000496852 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
ATPAF2-208ENST00000496852 MYO3AQ8NEV4 1616 aa20.37■□□□□ 0.85
ATPAF2-208ENST00000496852 SIN3AQ96ST3 1273 aa20.36■□□□□ 0.85
ATPAF2-208ENST00000496852 TNRQ92752 1358 aa20.36■□□□□ 0.85
ATPAF2-208ENST00000496852 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
ATPAF2-208ENST00000496852 NEURL4Q96JN8 1562 aa20.34■□□□□ 0.85
ATPAF2-208ENST00000496852 TMEM131LA2VDJ0 1609 aa20.34■□□□□ 0.85
ATPAF2-208ENST00000496852 ZNF142P52746 1687 aaPredicted RBP20.33■□□□□ 0.85
ATPAF2-208ENST00000496852 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
ATPAF2-208ENST00000496852 UBR1Q8IWV7 1749 aa20.33■□□□□ 0.84
ATPAF2-208ENST00000496852 SLC52A1Q9NWF4 448 aa20.32■□□□□ 0.84
ATPAF2-208ENST00000496852 NLRP1Q9C000 1473 aa20.32■□□□□ 0.84
ATPAF2-208ENST00000496852 ADGRB3O60242 1522 aa20.31■□□□□ 0.84
ATPAF2-208ENST00000496852 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
ATPAF2-208ENST00000496852 IDI1Q13907 227 aa20.3■□□□□ 0.84
ATPAF2-208ENST00000496852 SPATA31E1Q6ZUB1 1445 aa20.3■□□□□ 0.84
ATPAF2-208ENST00000496852 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
ATPAF2-208ENST00000496852 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-208ENST00000496852 PPLO60437 1756 aa20.27■□□□□ 0.84
ATPAF2-208ENST00000496852 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
ATPAF2-208ENST00000496852 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
ATPAF2-208ENST00000496852 UHRF1BP1Q6BDS2 1440 aa20.21■□□□□ 0.83
ATPAF2-208ENST00000496852 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
ATPAF2-208ENST00000496852 NEXMIFQ5QGS0 1516 aa20.2■□□□□ 0.82
ATPAF2-208ENST00000496852 TIMELESSQ9UNS1 1208 aa20.19■□□□□ 0.82
ATPAF2-208ENST00000496852 RGL3Q3MIN7 710 aa20.18■□□□□ 0.82
ATPAF2-208ENST00000496852 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
ATPAF2-208ENST00000496852 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
ATPAF2-208ENST00000496852 SLIT1O75093 1534 aa20.16■□□□□ 0.82
ATPAF2-208ENST00000496852 ZNF326Q5BKZ1 582 aaKnown RBP20.14■□□□□ 0.81
ATPAF2-208ENST00000496852 ARHGAP23Q9P227 1491 aa20.14■□□□□ 0.81
ATPAF2-208ENST00000496852 RPGRIP1LQ68CZ1 1315 aa20.14■□□□□ 0.81
ATPAF2-208ENST00000496852 MYOM2P54296 1465 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms