RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.91
PHGDH-207ENST00000496756 MTUS2Q5JR59 1369 aa20.76■□□□□ 0.91
PHGDH-207ENST00000496756 TNRQ92752 1358 aa20.75■□□□□ 0.91
PHGDH-207ENST00000496756 DHX29Q7Z478 1369 aaKnown RBP20.74■□□□□ 0.91
PHGDH-207ENST00000496756 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
PHGDH-207ENST00000496756 NEURL4Q96JN8 1562 aa20.73■□□□□ 0.91
PHGDH-207ENST00000496756 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
PHGDH-207ENST00000496756 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-207ENST00000496756 MBD5Q9P267 1494 aa20.72■□□□□ 0.91
PHGDH-207ENST00000496756 PZPP20742 1482 aa20.71■□□□□ 0.91
PHGDH-207ENST00000496756 FBXO31Q5XUX0 539 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-207ENST00000496756 PHF23Q9BUL5 403 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-207ENST00000496756 ZNF644Q9H582 1327 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-207ENST00000496756 KIF3BO15066 747 aa20.7■□□□□ 0.9
PHGDH-207ENST00000496756 KDM5DQ9BY66 1539 aa20.69■□□□□ 0.9
PHGDH-207ENST00000496756 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
PHGDH-207ENST00000496756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
PHGDH-207ENST00000496756 NLRP1Q9C000 1473 aa20.68■□□□□ 0.9
PHGDH-207ENST00000496756 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
PHGDH-207ENST00000496756 VWDEQ8N2E2 1590 aa20.67■□□□□ 0.9
PHGDH-207ENST00000496756 MIA2Q96PC5 1412 aa20.66■□□□□ 0.9
PHGDH-207ENST00000496756 MED14O60244 1454 aa20.66■□□□□ 0.9
PHGDH-207ENST00000496756 DEPDC5O75140 1603 aa20.65■□□□□ 0.9
PHGDH-207ENST00000496756 UGGT1Q9NYU2 1555 aa20.65■□□□□ 0.9
PHGDH-207ENST00000496756 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
PHGDH-207ENST00000496756 RSPH4AQ5TD94 716 aa20.65■□□□□ 0.9
PHGDH-207ENST00000496756 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
PHGDH-207ENST00000496756 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
PHGDH-207ENST00000496756 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
PHGDH-207ENST00000496756 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
PHGDH-207ENST00000496756 IQGAP1P46940 1657 aa20.59■□□□□ 0.89
PHGDH-207ENST00000496756 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
PHGDH-207ENST00000496756 RNF17Q9BXT8 1623 aaKnown RBP20.55■□□□□ 0.88
PHGDH-207ENST00000496756 CAMSAP2Q08AD1 1489 aa20.55■□□□□ 0.88
PHGDH-207ENST00000496756 SYNMO15061 1565 aa20.55■□□□□ 0.88
PHGDH-207ENST00000496756 TSPY4P0CV99 314 aa20.54■□□□□ 0.88
PHGDH-207ENST00000496756 TSPY10P0CW01 314 aa20.54■□□□□ 0.88
PHGDH-207ENST00000496756 STRCP1A6NGW2 1772 aa20.51■□□□□ 0.87
PHGDH-207ENST00000496756 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-207ENST00000496756 ZC3H13Q5T200 1668 aaKnown RBP20.5■□□□□ 0.87
PHGDH-207ENST00000496756 ARHGEF5Q12774 1597 aa20.5■□□□□ 0.87
PHGDH-207ENST00000496756 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
PHGDH-207ENST00000496756 ABCC3O15438 1527 aa20.48■□□□□ 0.87
PHGDH-207ENST00000496756 ERVK-7P63135 1459 aa20.46■□□□□ 0.87
PHGDH-207ENST00000496756 SCAF11Q99590 1463 aaKnown RBP20.44■□□□□ 0.86
PHGDH-207ENST00000496756 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
PHGDH-207ENST00000496756 UBR1Q8IWV7 1749 aa20.42■□□□□ 0.86
PHGDH-207ENST00000496756 RGS17Q9UGC6 210 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-207ENST00000496756 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
PHGDH-207ENST00000496756 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
PHGDH-207ENST00000496756 EID1Q9Y6B2 187 aa20.39■□□□□ 0.85
PHGDH-207ENST00000496756 SLIT1O75093 1534 aa20.38■□□□□ 0.85
PHGDH-207ENST00000496756 ARHGAP23Q9P227 1491 aa20.38■□□□□ 0.85
PHGDH-207ENST00000496756 LTKP29376 864 aa20.38■□□□□ 0.85
PHGDH-207ENST00000496756 FAM135BQ49AJ0 1406 aa20.37■□□□□ 0.85
PHGDH-207ENST00000496756 CFAP65Q6ZU64 1925 aaKnown RBP20.37■□□□□ 0.85
PHGDH-207ENST00000496756 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
PHGDH-207ENST00000496756 CEP152O94986 1710 aa20.35■□□□□ 0.85
PHGDH-207ENST00000496756 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
PHGDH-207ENST00000496756 XIRP1Q702N8 1843 aaKnown RBP20.34■□□□□ 0.85
PHGDH-207ENST00000496756 ARHGAP31Q2M1Z3 1444 aa20.34■□□□□ 0.85
PHGDH-207ENST00000496756 DUOX2Q9NRD8 1548 aa20.32■□□□□ 0.84
PHGDH-207ENST00000496756 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
PHGDH-207ENST00000496756 POTEAQ6S8J7 498 aa20.3■□□□□ 0.84
PHGDH-207ENST00000496756 STAG3Q9UJ98 1225 aa20.3■□□□□ 0.84
PHGDH-207ENST00000496756 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
PHGDH-207ENST00000496756 TMEM94Q12767 1356 aa20.29■□□□□ 0.84
PHGDH-207ENST00000496756 LRRC9Q6ZRR7 1453 aa20.29■□□□□ 0.84
PHGDH-207ENST00000496756 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
PHGDH-207ENST00000496756 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-207ENST00000496756 KCNA6P17658 529 aa20.27■□□□□ 0.84
PHGDH-207ENST00000496756 PIK3C2BO00750 1634 aa20.25■□□□□ 0.83
PHGDH-207ENST00000496756 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
PHGDH-207ENST00000496756 KDM5AP29375 1690 aaKnown RBP20.25■□□□□ 0.83
PHGDH-207ENST00000496756 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
PHGDH-207ENST00000496756 KIF15Q9NS87 1388 aa20.24■□□□□ 0.83
PHGDH-207ENST00000496756 PROSER2Q86WR7 435 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-207ENST00000496756 KANK1Q14678 1352 aa20.23■□□□□ 0.83
PHGDH-207ENST00000496756 EFCAB6Q5THR3 1501 aa20.23■□□□□ 0.83
PHGDH-207ENST00000496756 APLP2Q06481 763 aa20.23■□□□□ 0.83
PHGDH-207ENST00000496756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
PHGDH-207ENST00000496756 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
PHGDH-207ENST00000496756 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
PHGDH-207ENST00000496756 IDI1Q13907 227 aa20.19■□□□□ 0.82
PHGDH-207ENST00000496756 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
PHGDH-207ENST00000496756 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
PHGDH-207ENST00000496756 TET3O43151 1660 aa20.19■□□□□ 0.82
PHGDH-207ENST00000496756 MSH6P52701 1360 aa20.19■□□□□ 0.82
PHGDH-207ENST00000496756 JCADQ9P266 1359 aa20.17■□□□□ 0.82
PHGDH-207ENST00000496756 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-207ENST00000496756 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
PHGDH-207ENST00000496756 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
PHGDH-207ENST00000496756 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
PHGDH-207ENST00000496756 CROCC2H7BZ55 1655 aa20.14■□□□□ 0.81
PHGDH-207ENST00000496756 LMTK2Q8IWU2 1503 aa20.14■□□□□ 0.81
PHGDH-207ENST00000496756 ABCC5O15440 1437 aa20.14■□□□□ 0.81
PHGDH-207ENST00000496756 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
PHGDH-207ENST00000496756 BCANQ96GW7 911 aa20.13■□□□□ 0.81
PHGDH-207ENST00000496756 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
PHGDH-207ENST00000496756 SLC52A1Q9NWF4 448 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms