RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 MLECQ14165 292 aa14.83□□□□□ -0.04
C4A-258ENST00000496659 REREQ9P2R6 1566 aa14.82□□□□□ -0.04
C4A-258ENST00000496659 PLPPR3Q6T4P5 718 aa14.82□□□□□ -0.04
C4A-258ENST00000496659 DHX29Q7Z478 1369 aaKnown RBP14.81□□□□□ -0.04
C4A-258ENST00000496659 ATP10AO60312 1499 aa14.81□□□□□ -0.04
C4A-258ENST00000496659 RIMS1Q86UR5 1692 aaKnown RBP14.81□□□□□ -0.04
C4A-258ENST00000496659 ILDR1Q86SU0 546 aaPredicted RBP14.8□□□□□ -0.04
C4A-258ENST00000496659 UNC13BO14795 1591 aa14.77□□□□□ -0.04
C4A-258ENST00000496659 AGLP35573 1532 aa14.76□□□□□ -0.05
C4A-258ENST00000496659 DEPDC5O75140 1603 aa14.74□□□□□ -0.05
C4A-258ENST00000496659 RNF17Q9BXT8 1623 aaKnown RBP14.74□□□□□ -0.05
C4A-258ENST00000496659 KDM5DQ9BY66 1539 aa14.74□□□□□ -0.05
C4A-258ENST00000496659 KANK1Q14678 1352 aa14.73□□□□□ -0.05
C4A-258ENST00000496659 PRDM15P57071 1507 aaPredicted RBP14.73□□□□□ -0.05
C4A-258ENST00000496659 CEBPAP49715 358 aaPredicted RBP14.73□□□□□ -0.05
C4A-258ENST00000496659 HSPA2P54652 639 aa14.73□□□□□ -0.05
C4A-258ENST00000496659 TRIM52Q96A61 297 aa14.73□□□□□ -0.05
C4A-258ENST00000496659 LMTK3Q96Q04 1460 aa14.73□□□□□ -0.05
C4A-258ENST00000496659 KIF3BO15066 747 aa14.72□□□□□ -0.05
C4A-258ENST00000496659 FAM135AQ9P2D6 1515 aa14.71□□□□□ -0.05
C4A-258ENST00000496659 FER1L4A9Z1Z3 1794 aa14.71□□□□□ -0.05
C4A-258ENST00000496659 NUP155O75694 1391 aa14.71□□□□□ -0.06
C4A-258ENST00000496659 IQGAP3Q86VI3 1631 aa14.7□□□□□ -0.06
C4A-258ENST00000496659 ZC3H13Q5T200 1668 aaKnown RBP14.69□□□□□ -0.06
C4A-258ENST00000496659 MROH1Q8NDA8 1641 aa14.67□□□□□ -0.06
C4A-258ENST00000496659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
C4A-258ENST00000496659 VWDEQ8N2E2 1590 aa14.66□□□□□ -0.06
C4A-258ENST00000496659 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
C4A-258ENST00000496659 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
C4A-258ENST00000496659 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
C4A-258ENST00000496659 PZPP20742 1482 aa14.65□□□□□ -0.06
C4A-258ENST00000496659 GGT6Q6P531 493 aa14.65□□□□□ -0.06
C4A-258ENST00000496659 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
C4A-258ENST00000496659 LMTK2Q8IWU2 1503 aa14.65□□□□□ -0.06
C4A-258ENST00000496659 TET3O43151 1660 aa14.64□□□□□ -0.07
C4A-258ENST00000496659 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
C4A-258ENST00000496659 MPHOSPH9Q99550 1183 aa14.63□□□□□ -0.07
C4A-258ENST00000496659 ABCC3O15438 1527 aa14.62□□□□□ -0.07
C4A-258ENST00000496659 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
C4A-258ENST00000496659 WASHC2CQ9Y4E1 1318 aa14.62□□□□□ -0.07
C4A-258ENST00000496659 SETD1BQ9UPS6 1966 aaKnown RBP14.62□□□□□ -0.07
C4A-258ENST00000496659 EFCAB6Q5THR3 1501 aa14.61□□□□□ -0.07
C4A-258ENST00000496659 CEP152O94986 1710 aa14.61□□□□□ -0.07
C4A-258ENST00000496659 CNTLNQ9NXG0 1405 aa14.6□□□□□ -0.07
C4A-258ENST00000496659 CAMSAP1Q5T5Y3 1602 aa14.6□□□□□ -0.07
C4A-258ENST00000496659 RPRD2Q5VT52 1461 aaKnown RBP14.59□□□□□ -0.07
C4A-258ENST00000496659 PKD2Q13563 968 aa14.58□□□□□ -0.08
C4A-258ENST00000496659 C3P01024 1663 aa14.57□□□□□ -0.08
C4A-258ENST00000496659 ARHGAP31Q2M1Z3 1444 aa14.57□□□□□ -0.08
C4A-258ENST00000496659 CLTCQ00610 1675 aaKnown RBP14.56□□□□□ -0.08
C4A-258ENST00000496659 MROH2AA6NES4 1674 aa14.55□□□□□ -0.08
C4A-258ENST00000496659 E9PCH4 1651 aa14.55□□□□□ -0.08
C4A-258ENST00000496659 PREX1Q8TCU6 1659 aa14.55□□□□□ -0.08
C4A-258ENST00000496659 FBXO41Q8TF61 875 aa14.55□□□□□ -0.08
C4A-258ENST00000496659 STRCQ7RTU9 1775 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 SPHKAPQ2M3C7 1700 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 TRPM2O94759 1503 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 NPATQ14207 1427 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 UHRF1BP1Q6BDS2 1440 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 ZMYM3Q14202 1370 aa14.52□□□□□ -0.08
C4A-258ENST00000496659 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
C4A-258ENST00000496659 ANKRD30BQ9BXX2 1392 aa14.5□□□□□ -0.09
C4A-258ENST00000496659 PTPRTO14522 1441 aa14.49□□□□□ -0.09
C4A-258ENST00000496659 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
C4A-258ENST00000496659 FOXD1Q16676 465 aa14.49□□□□□ -0.09
C4A-258ENST00000496659 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
C4A-258ENST00000496659 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
C4A-258ENST00000496659 NOS1P29475 1434 aa14.47□□□□□ -0.09
C4A-258ENST00000496659 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
C4A-258ENST00000496659 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.09
C4A-258ENST00000496659 TONSLQ96HA7 1378 aa14.44□□□□□ -0.1
C4A-258ENST00000496659 PLA2R1Q13018 1463 aa14.44□□□□□ -0.1
C4A-258ENST00000496659 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
C4A-258ENST00000496659 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
C4A-258ENST00000496659 SYNMO15061 1565 aa14.43□□□□□ -0.1
C4A-258ENST00000496659 CLTCL1P53675 1640 aa14.42□□□□□ -0.1
C4A-258ENST00000496659 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
C4A-258ENST00000496659 SLC52A1Q9NWF4 448 aa14.42□□□□□ -0.1
C4A-258ENST00000496659 NEURL4Q96JN8 1562 aa14.42□□□□□ -0.1
C4A-258ENST00000496659 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
C4A-258ENST00000496659 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
C4A-258ENST00000496659 TNRQ92752 1358 aa14.41□□□□□ -0.1
C4A-258ENST00000496659 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
C4A-258ENST00000496659 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
C4A-258ENST00000496659 NLRP1Q9C000 1473 aa14.39□□□□□ -0.11
C4A-258ENST00000496659 KIF1BO60333 1816 aa14.39□□□□□ -0.11
C4A-258ENST00000496659 ADGRB3O60242 1522 aa14.38□□□□□ -0.11
C4A-258ENST00000496659 UGGT1Q9NYU2 1555 aa14.38□□□□□ -0.11
C4A-258ENST00000496659 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
C4A-258ENST00000496659 KDM5AP29375 1690 aaKnown RBP14.35□□□□□ -0.11
C4A-258ENST00000496659 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
C4A-258ENST00000496659 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
C4A-258ENST00000496659 STAG3Q9UJ98 1225 aa14.34□□□□□ -0.11
C4A-258ENST00000496659 CEP170BQ9Y4F5 1589 aaPredicted RBP14.34□□□□□ -0.11
C4A-258ENST00000496659 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
C4A-258ENST00000496659 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
C4A-258ENST00000496659 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.12
C4A-258ENST00000496659 IDI1Q13907 227 aa14.32□□□□□ -0.12
C4A-258ENST00000496659 STAC3Q96MF2 364 aa14.32□□□□□ -0.12
C4A-258ENST00000496659 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms