RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 TNRQ92752 1358 aa15.85■□□□□ 0.13
SH3D21-204ENST00000496636 POLR1AO95602 1720 aaPredicted RBP15.85■□□□□ 0.13
SH3D21-204ENST00000496636 PZPP20742 1482 aa15.83■□□□□ 0.12
SH3D21-204ENST00000496636 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
SH3D21-204ENST00000496636 KDM5DQ9BY66 1539 aa15.81■□□□□ 0.12
SH3D21-204ENST00000496636 NLRP1Q9C000 1473 aa15.81■□□□□ 0.12
SH3D21-204ENST00000496636 VWDEQ8N2E2 1590 aa15.8■□□□□ 0.12
SH3D21-204ENST00000496636 ANKLE2Q86XL3 938 aa15.8■□□□□ 0.12
SH3D21-204ENST00000496636 MED14O60244 1454 aa15.79■□□□□ 0.12
SH3D21-204ENST00000496636 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
SH3D21-204ENST00000496636 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
SH3D21-204ENST00000496636 THEMISQ8N1K5 641 aaPredicted RBP15.78■□□□□ 0.12
SH3D21-204ENST00000496636 DEPDC5O75140 1603 aa15.78■□□□□ 0.12
SH3D21-204ENST00000496636 NPHP4O75161 1426 aaPredicted RBP15.77■□□□□ 0.12
SH3D21-204ENST00000496636 MBD5Q9P267 1494 aa15.77■□□□□ 0.11
SH3D21-204ENST00000496636 ALKQ9UM73 1620 aa15.76■□□□□ 0.11
SH3D21-204ENST00000496636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.115e-6■■■■■ 46.2
SH3D21-204ENST00000496636 SYNMO15061 1565 aa15.75■□□□□ 0.11
SH3D21-204ENST00000496636 UGGT1Q9NYU2 1555 aa15.75■□□□□ 0.11
SH3D21-204ENST00000496636 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
SH3D21-204ENST00000496636 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
SH3D21-204ENST00000496636 TIAM1Q13009 1591 aa15.74■□□□□ 0.11
SH3D21-204ENST00000496636 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
SH3D21-204ENST00000496636 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
SH3D21-204ENST00000496636 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
SH3D21-204ENST00000496636 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
SH3D21-204ENST00000496636 KIF3BO15066 747 aa15.72■□□□□ 0.11
SH3D21-204ENST00000496636 IQGAP1P46940 1657 aa15.72■□□□□ 0.11
SH3D21-204ENST00000496636 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
SH3D21-204ENST00000496636 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
SH3D21-204ENST00000496636 LRRC7Q96NW7 1537 aa15.7■□□□□ 0.1
SH3D21-204ENST00000496636 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
SH3D21-204ENST00000496636 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
SH3D21-204ENST00000496636 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
SH3D21-204ENST00000496636 ZC3H13Q5T200 1668 aaKnown RBP15.64■□□□□ 0.09
SH3D21-204ENST00000496636 ABCC3O15438 1527 aa15.63■□□□□ 0.09
SH3D21-204ENST00000496636 ARHGEF5Q12774 1597 aa15.62■□□□□ 0.09
SH3D21-204ENST00000496636 ERVK-7P63135 1459 aa15.62■□□□□ 0.09
SH3D21-204ENST00000496636 SCAF11Q99590 1463 aaKnown RBP15.62■□□□□ 0.09
SH3D21-204ENST00000496636 STRCP1A6NGW2 1772 aa15.61■□□□□ 0.09
SH3D21-204ENST00000496636 SENP3Q9H4L4 574 aaPredicted RBP15.6■□□□□ 0.09
SH3D21-204ENST00000496636 NCOA2Q15596 1464 aa15.59■□□□□ 0.09
SH3D21-204ENST00000496636 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
SH3D21-204ENST00000496636 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
SH3D21-204ENST00000496636 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
SH3D21-204ENST00000496636 FAM135BQ49AJ0 1406 aa15.58■□□□□ 0.08
SH3D21-204ENST00000496636 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
SH3D21-204ENST00000496636 ARHGAP23Q9P227 1491 aa15.57■□□□□ 0.08
SH3D21-204ENST00000496636 SLIT1O75093 1534 aa15.57■□□□□ 0.08
SH3D21-204ENST00000496636 UBR1Q8IWV7 1749 aa15.55■□□□□ 0.08
SH3D21-204ENST00000496636 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
SH3D21-204ENST00000496636 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
SH3D21-204ENST00000496636 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.08
SH3D21-204ENST00000496636 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.08
SH3D21-204ENST00000496636 MROH1Q8NDA8 1641 aa15.52■□□□□ 0.08
SH3D21-204ENST00000496636 ARHGAP31Q2M1Z3 1444 aa15.51■□□□□ 0.07
SH3D21-204ENST00000496636 LTKP29376 864 aa15.5■□□□□ 0.07
SH3D21-204ENST00000496636 TMEM94Q12767 1356 aa15.49■□□□□ 0.07
SH3D21-204ENST00000496636 POTEAQ6S8J7 498 aa15.49■□□□□ 0.07
SH3D21-204ENST00000496636 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
SH3D21-204ENST00000496636 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
SH3D21-204ENST00000496636 DUOX2Q9NRD8 1548 aa15.48■□□□□ 0.07
SH3D21-204ENST00000496636 NKTRP30414 1462 aaKnown RBP15.47■□□□□ 0.07
SH3D21-204ENST00000496636 XIRP1Q702N8 1843 aaKnown RBP15.47■□□□□ 0.07
SH3D21-204ENST00000496636 MAP3K1Q13233 1512 aa15.46■□□□□ 0.07
SH3D21-204ENST00000496636 CEP152O94986 1710 aa15.46■□□□□ 0.06
SH3D21-204ENST00000496636 ROBO1Q9Y6N7 1651 aa15.45■□□□□ 0.06
SH3D21-204ENST00000496636 ERBINQ96RT1 1412 aa15.44■□□□□ 0.06
SH3D21-204ENST00000496636 KCNA6P17658 529 aa15.44■□□□□ 0.06
SH3D21-204ENST00000496636 KDM5AP29375 1690 aaKnown RBP15.44■□□□□ 0.06
SH3D21-204ENST00000496636 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
SH3D21-204ENST00000496636 JCADQ9P266 1359 aa15.43■□□□□ 0.06
SH3D21-204ENST00000496636 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
SH3D21-204ENST00000496636 NWD1Q149M9 1564 aa15.42■□□□□ 0.06
SH3D21-204ENST00000496636 MSH6P52701 1360 aa15.42■□□□□ 0.06
SH3D21-204ENST00000496636 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
SH3D21-204ENST00000496636 PIK3C2BO00750 1634 aa15.42■□□□□ 0.06
SH3D21-204ENST00000496636 KIF15Q9NS87 1388 aa15.41■□□□□ 0.06
SH3D21-204ENST00000496636 KANK1Q14678 1352 aa15.4■□□□□ 0.06
SH3D21-204ENST00000496636 PROSER2Q86WR7 435 aaPredicted RBP15.4■□□□□ 0.06
SH3D21-204ENST00000496636 SETD1AO15047 1707 aaKnown RBP15.39■□□□□ 0.05
SH3D21-204ENST00000496636 TET3O43151 1660 aa15.38■□□□□ 0.05
SH3D21-204ENST00000496636 FGD6Q6ZV73 1430 aa15.37■□□□□ 0.05
SH3D21-204ENST00000496636 ADGRB3O60242 1522 aa15.37■□□□□ 0.05
SH3D21-204ENST00000496636 LMTK2Q8IWU2 1503 aa15.37■□□□□ 0.05
SH3D21-204ENST00000496636 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
SH3D21-204ENST00000496636 PHLPP1O60346 1717 aa15.35■□□□□ 0.05
SH3D21-204ENST00000496636 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
SH3D21-204ENST00000496636 SLAIN2Q9P270 581 aa15.35■□□□□ 0.05
SH3D21-204ENST00000496636 ZNF772Q68DY9 489 aaPredicted RBP15.34■□□□□ 0.05
SH3D21-204ENST00000496636 CFAP65Q6ZU64 1925 aaKnown RBP15.34■□□□□ 0.05
SH3D21-204ENST00000496636 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
SH3D21-204ENST00000496636 COL16A1Q07092 1604 aaPredicted RBP15.33■□□□□ 0.04
SH3D21-204ENST00000496636 IDI1Q13907 227 aa15.33■□□□□ 0.04
SH3D21-204ENST00000496636 NOS1P29475 1434 aa15.33■□□□□ 0.04
SH3D21-204ENST00000496636 NCOA3Q9Y6Q9 1424 aa15.33■□□□□ 0.04
SH3D21-204ENST00000496636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.046e-6■□□□□ 8.3
SH3D21-204ENST00000496636 CROCC2H7BZ55 1655 aa15.32■□□□□ 0.04
SH3D21-204ENST00000496636 MEX3CQ5U5Q3 659 aaKnown RBP15.31■□□□□ 0.04
SH3D21-204ENST00000496636 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms