RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
TSSC4-210ENST00000496468 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
TSSC4-210ENST00000496468 FAM135AQ9P2D6 1515 aa27.47■■□□□ 1.99
TSSC4-210ENST00000496468 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
TSSC4-210ENST00000496468 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
TSSC4-210ENST00000496468 ADAMTSL3P82987 1691 aa27.46■■□□□ 1.99
TSSC4-210ENST00000496468 MLECQ14165 292 aa27.45■■□□□ 1.98
TSSC4-210ENST00000496468 MADDQ8WXG6 1647 aa27.45■■□□□ 1.98
TSSC4-210ENST00000496468 RAB3GAP2Q9H2M9 1393 aa27.44■■□□□ 1.98
TSSC4-210ENST00000496468 GGT6Q6P531 493 aa27.43■■□□□ 1.98
TSSC4-210ENST00000496468 CEP152O94986 1710 aa27.42■■□□□ 1.98
TSSC4-210ENST00000496468 VWDEQ8N2E2 1590 aa27.41■■□□□ 1.98
TSSC4-210ENST00000496468 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
TSSC4-210ENST00000496468 CLTCQ00610 1675 aaKnown RBP27.4■■□□□ 1.98
TSSC4-210ENST00000496468 KANK1Q14678 1352 aa27.4■■□□□ 1.98
TSSC4-210ENST00000496468 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
TSSC4-210ENST00000496468 ABCC3O15438 1527 aa27.4■■□□□ 1.98
TSSC4-210ENST00000496468 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.97
TSSC4-210ENST00000496468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.37■■□□□ 1.97
TSSC4-210ENST00000496468 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
TSSC4-210ENST00000496468 CNTLNQ9NXG0 1405 aa27.36■■□□□ 1.97
TSSC4-210ENST00000496468 CAMSAP1Q5T5Y3 1602 aa27.36■■□□□ 1.97
TSSC4-210ENST00000496468 LMTK2Q8IWU2 1503 aa27.35■■□□□ 1.97
TSSC4-210ENST00000496468 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
TSSC4-210ENST00000496468 TET3O43151 1660 aa27.33■■□□□ 1.97
TSSC4-210ENST00000496468 ESF1Q9H501 851 aaKnown RBP27.33■■□□□ 1.97
TSSC4-210ENST00000496468 NUP155O75694 1391 aa27.33■■□□□ 1.97
TSSC4-210ENST00000496468 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
TSSC4-210ENST00000496468 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
TSSC4-210ENST00000496468 WASHC2CQ9Y4E1 1318 aa27.31■■□□□ 1.96
TSSC4-210ENST00000496468 TRIM52Q96A61 297 aa27.29■■□□□ 1.96
TSSC4-210ENST00000496468 PZPP20742 1482 aa27.27■■□□□ 1.96
TSSC4-210ENST00000496468 HRCP23327 699 aa27.26■■□□□ 1.95
TSSC4-210ENST00000496468 C3P01024 1663 aa27.26■■□□□ 1.95
TSSC4-210ENST00000496468 E9PCH4 1651 aa27.22■■□□□ 1.95
TSSC4-210ENST00000496468 PTPRMP28827 1452 aa27.21■■□□□ 1.95
TSSC4-210ENST00000496468 KDM4FA0A1W2PPD8 638 aa27.21■■□□□ 1.95
TSSC4-210ENST00000496468 ARHGAP31Q2M1Z3 1444 aa27.2■■□□□ 1.94
TSSC4-210ENST00000496468 NPATQ14207 1427 aa27.19■■□□□ 1.94
TSSC4-210ENST00000496468 RPRD2Q5VT52 1461 aaKnown RBP27.19■■□□□ 1.94
TSSC4-210ENST00000496468 ZMYM3Q14202 1370 aa27.18■■□□□ 1.94
TSSC4-210ENST00000496468 PREX1Q8TCU6 1659 aa27.17■■□□□ 1.94
TSSC4-210ENST00000496468 SLC4A1APQ9BWU0 796 aaKnown RBP27.16■■□□□ 1.94
TSSC4-210ENST00000496468 ERVK-7P63135 1459 aa27.13■■□□□ 1.93
TSSC4-210ENST00000496468 SPATA31D1Q6ZQQ2 1576 aa27.13■■□□□ 1.93
TSSC4-210ENST00000496468 SPHKAPQ2M3C7 1700 aa27.12■■□□□ 1.93
TSSC4-210ENST00000496468 MPHOSPH9Q99550 1183 aa27.11■■□□□ 1.93
TSSC4-210ENST00000496468 PLPPR3Q6T4P5 718 aa27.1■■□□□ 1.93
TSSC4-210ENST00000496468 PKD2Q13563 968 aa27.08■■□□□ 1.93
TSSC4-210ENST00000496468 CEBPAP49715 358 aaPredicted RBP27.07■■□□□ 1.92
TSSC4-210ENST00000496468 CFAP65Q6ZU64 1925 aaKnown RBP27.06■■□□□ 1.92
TSSC4-210ENST00000496468 SYNMO15061 1565 aa27.06■■□□□ 1.92
TSSC4-210ENST00000496468 TRPM2O94759 1503 aa27.06■■□□□ 1.92
TSSC4-210ENST00000496468 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
TSSC4-210ENST00000496468 NOS1P29475 1434 aa27.05■■□□□ 1.92
TSSC4-210ENST00000496468 DHX57Q6P158 1386 aaKnown RBP27.03■■□□□ 1.92
TSSC4-210ENST00000496468 TNRQ92752 1358 aa27.03■■□□□ 1.92
TSSC4-210ENST00000496468 FBXO31Q5XUX0 539 aaPredicted RBP27.01■■□□□ 1.91
TSSC4-210ENST00000496468 PTPRTO14522 1441 aa27■■□□□ 1.91
TSSC4-210ENST00000496468 FOXD1Q16676 465 aa26.99■■□□□ 1.91
TSSC4-210ENST00000496468 PIK3C2BO00750 1634 aa26.98■■□□□ 1.91
TSSC4-210ENST00000496468 ZNF142P52746 1687 aaPredicted RBP26.97■■□□□ 1.91
TSSC4-210ENST00000496468 UGGT1Q9NYU2 1555 aa26.97■■□□□ 1.91
TSSC4-210ENST00000496468 CLTCL1P53675 1640 aa26.96■■□□□ 1.91
TSSC4-210ENST00000496468 PLA2R1Q13018 1463 aa26.95■■□□□ 1.91
TSSC4-210ENST00000496468 NLRP1Q9C000 1473 aa26.95■■□□□ 1.91
TSSC4-210ENST00000496468 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
TSSC4-210ENST00000496468 UHRF1BP1Q6BDS2 1440 aa26.92■■□□□ 1.9
TSSC4-210ENST00000496468 SETD1BQ9UPS6 1966 aaKnown RBP26.91■■□□□ 1.9
TSSC4-210ENST00000496468 CCDC144AA2RUR9 1427 aa26.9■■□□□ 1.9
TSSC4-210ENST00000496468 ADGRB3O60242 1522 aa26.9■■□□□ 1.9
TSSC4-210ENST00000496468 ANKRD30BQ9BXX2 1392 aa26.9■■□□□ 1.9
TSSC4-210ENST00000496468 A2ML1A8K2U0 1454 aa26.88■■□□□ 1.89
TSSC4-210ENST00000496468 KDM5AP29375 1690 aaKnown RBP26.88■■□□□ 1.89
TSSC4-210ENST00000496468 SLC52A1Q9NWF4 448 aa26.87■■□□□ 1.89
TSSC4-210ENST00000496468 KIF1BO60333 1816 aa26.86■■□□□ 1.89
TSSC4-210ENST00000496468 UBR1Q8IWV7 1749 aa26.86■■□□□ 1.89
TSSC4-210ENST00000496468 TMEM131LA2VDJ0 1609 aa26.83■■□□□ 1.88
TSSC4-210ENST00000496468 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
TSSC4-210ENST00000496468 MYO5BQ9ULV0 1848 aa26.81■■□□□ 1.88
TSSC4-210ENST00000496468 IDI1Q13907 227 aa26.81■■□□□ 1.88
TSSC4-210ENST00000496468 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
TSSC4-210ENST00000496468 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
TSSC4-210ENST00000496468 CCER1Q8TC90 406 aaPredicted RBP26.77■■□□□ 1.88
TSSC4-210ENST00000496468 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
TSSC4-210ENST00000496468 CHGAP10645 457 aaKnown RBP26.74■■□□□ 1.87
TSSC4-210ENST00000496468 CLSPNQ9HAW4 1339 aa26.73■■□□□ 1.87
TSSC4-210ENST00000496468 SPATA31E1Q6ZUB1 1445 aa26.72■■□□□ 1.87
TSSC4-210ENST00000496468 SLIT1O75093 1534 aa26.7■■□□□ 1.86
TSSC4-210ENST00000496468 ARHGAP23Q9P227 1491 aa26.68■■□□□ 1.86
TSSC4-210ENST00000496468 POLR1AO95602 1720 aaPredicted RBP26.67■■□□□ 1.86
TSSC4-210ENST00000496468 IFT172Q9UG01 1749 aa26.67■■□□□ 1.86
TSSC4-210ENST00000496468 NEXMIFQ5QGS0 1516 aa26.66■■□□□ 1.86
TSSC4-210ENST00000496468 THEMISQ8N1K5 641 aaPredicted RBP26.66■■□□□ 1.86
TSSC4-210ENST00000496468 TMEM2Q9UHN6 1383 aa26.66■■□□□ 1.86
TSSC4-210ENST00000496468 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
TSSC4-210ENST00000496468 PPLO60437 1756 aa26.65■■□□□ 1.86
TSSC4-210ENST00000496468 ZNF326Q5BKZ1 582 aaKnown RBP26.64■■□□□ 1.86
TSSC4-210ENST00000496468 ZFYVE9O95405 1425 aa26.64■■□□□ 1.85
TSSC4-210ENST00000496468 RIMS2Q9UQ26 1411 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms