RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 MED14O60244 1454 aa19.35■□□□□ 0.69
ATG3-209ENST00000496423 DEPDC5O75140 1603 aa19.35■□□□□ 0.69
ATG3-209ENST00000496423 SYCP2Q9BX26 1530 aa19.35■□□□□ 0.69
ATG3-209ENST00000496423 FAM135AQ9P2D6 1515 aa19.35■□□□□ 0.69
ATG3-209ENST00000496423 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
ATG3-209ENST00000496423 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
ATG3-209ENST00000496423 CCDC18Q5T9S5 1454 aa19.34■□□□□ 0.69
ATG3-209ENST00000496423 ADGBQ8N7X0 1667 aa19.33■□□□□ 0.69
ATG3-209ENST00000496423 SYNMO15061 1565 aa19.33■□□□□ 0.69
ATG3-209ENST00000496423 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
ATG3-209ENST00000496423 IQGAP1P46940 1657 aa19.31■□□□□ 0.68
ATG3-209ENST00000496423 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
ATG3-209ENST00000496423 UGGT1Q9NYU2 1555 aa19.31■□□□□ 0.68
ATG3-209ENST00000496423 INO80Q9ULG1 1556 aaPredicted RBP19.31■□□□□ 0.68
ATG3-209ENST00000496423 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
ATG3-209ENST00000496423 NLRP1Q9C000 1473 aa19.3■□□□□ 0.68
ATG3-209ENST00000496423 ARHGAP35Q9NRY4 1499 aa19.3■□□□□ 0.68
ATG3-209ENST00000496423 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
ATG3-209ENST00000496423 PZPP20742 1482 aa19.28■□□□□ 0.68
ATG3-209ENST00000496423 WASHC2CQ9Y4E1 1318 aa19.27■□□□□ 0.68
ATG3-209ENST00000496423 MIA2Q96PC5 1412 aa19.27■□□□□ 0.68
ATG3-209ENST00000496423 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
ATG3-209ENST00000496423 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
ATG3-209ENST00000496423 GPATCH8Q9UKJ3 1502 aaKnown RBP19.24■□□□□ 0.67
ATG3-209ENST00000496423 KIF3BO15066 747 aa19.23■□□□□ 0.67
ATG3-209ENST00000496423 DHX29Q7Z478 1369 aaKnown RBP19.22■□□□□ 0.67
ATG3-209ENST00000496423 EHMT2Q96KQ7 1210 aa19.22■□□□□ 0.67
ATG3-209ENST00000496423 KDM5DQ9BY66 1539 aa19.21■□□□□ 0.67
ATG3-209ENST00000496423 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
ATG3-209ENST00000496423 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
ATG3-209ENST00000496423 SETD1AO15047 1707 aaKnown RBP19.2■□□□□ 0.66
ATG3-209ENST00000496423 CCNB3Q8WWL7 1395 aa19.19■□□□□ 0.66
ATG3-209ENST00000496423 RTEL1-TNFRSF6BF6WH68 1400 aa19.19■□□□□ 0.66
ATG3-209ENST00000496423 ZNF772Q68DY9 489 aaPredicted RBP19.13■□□□□ 0.65
ATG3-209ENST00000496423 EID1Q9Y6B2 187 aa19.12■□□□□ 0.65
ATG3-209ENST00000496423 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
ATG3-209ENST00000496423 XIRP1Q702N8 1843 aaKnown RBP19.1■□□□□ 0.65
ATG3-209ENST00000496423 TXNDC2Q86VQ3 553 aa19.1■□□□□ 0.65
ATG3-209ENST00000496423 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
ATG3-209ENST00000496423 JCADQ9P266 1359 aa19.09■□□□□ 0.65
ATG3-209ENST00000496423 ROBO1Q9Y6N7 1651 aa19.09■□□□□ 0.65
ATG3-209ENST00000496423 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
ATG3-209ENST00000496423 MEX3CQ5U5Q3 659 aaKnown RBP19.09■□□□□ 0.65
ATG3-209ENST00000496423 LRRC9Q6ZRR7 1453 aa19.09■□□□□ 0.65
ATG3-209ENST00000496423 TRIM52Q96A61 297 aa19.08■□□□□ 0.64
ATG3-209ENST00000496423 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.64
ATG3-209ENST00000496423 PROSER2Q86WR7 435 aaPredicted RBP19.05■□□□□ 0.64
ATG3-209ENST00000496423 RXRBP28702 533 aa19.04■□□□□ 0.64
ATG3-209ENST00000496423 TMEM94Q12767 1356 aa19.04■□□□□ 0.64
ATG3-209ENST00000496423 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
ATG3-209ENST00000496423 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
ATG3-209ENST00000496423 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
ATG3-209ENST00000496423 PHLPP1O60346 1717 aa19.03■□□□□ 0.64
ATG3-209ENST00000496423 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
ATG3-209ENST00000496423 LTKP29376 864 aa19.02■□□□□ 0.64
ATG3-209ENST00000496423 UBR1Q8IWV7 1749 aa19.02■□□□□ 0.63
ATG3-209ENST00000496423 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
ATG3-209ENST00000496423 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
ATG3-209ENST00000496423 KCNA6P17658 529 aa19.01■□□□□ 0.63
ATG3-209ENST00000496423 SLAIN2Q9P270 581 aa19■□□□□ 0.63
ATG3-209ENST00000496423 MSH6P52701 1360 aa18.99■□□□□ 0.63
ATG3-209ENST00000496423 ERVK-7P63135 1459 aa18.98■□□□□ 0.63
ATG3-209ENST00000496423 CCDC141Q6ZP82 1450 aa18.98■□□□□ 0.63
ATG3-209ENST00000496423 STAG3Q9UJ98 1225 aa18.98■□□□□ 0.63
ATG3-209ENST00000496423 SLIT1O75093 1534 aa18.98■□□□□ 0.63
ATG3-209ENST00000496423 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
ATG3-209ENST00000496423 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
ATG3-209ENST00000496423 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
ATG3-209ENST00000496423 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
ATG3-209ENST00000496423 ABCC3O15438 1527 aa18.93■□□□□ 0.62
ATG3-209ENST00000496423 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
ATG3-209ENST00000496423 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
ATG3-209ENST00000496423 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
ATG3-209ENST00000496423 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
ATG3-209ENST00000496423 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
ATG3-209ENST00000496423 BCANQ96GW7 911 aa18.89■□□□□ 0.61
ATG3-209ENST00000496423 ZRANB1Q9UGI0 708 aa18.89■□□□□ 0.61
ATG3-209ENST00000496423 TMEM2Q9UHN6 1383 aa18.89■□□□□ 0.61
ATG3-209ENST00000496423 NKTRP30414 1462 aaKnown RBP18.89■□□□□ 0.61
ATG3-209ENST00000496423 SLC26A8Q96RN1 970 aa18.88■□□□□ 0.61
ATG3-209ENST00000496423 COL16A1Q07092 1604 aaPredicted RBP18.86■□□□□ 0.61
ATG3-209ENST00000496423 LRP6O75581 1613 aa18.85■□□□□ 0.61
ATG3-209ENST00000496423 NUTM2BA6NNL0 878 aaPredicted RBP18.85■□□□□ 0.61
ATG3-209ENST00000496423 NUTM2EB1AL46 878 aaPredicted RBP18.85■□□□□ 0.61
ATG3-209ENST00000496423 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
ATG3-209ENST00000496423 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
ATG3-209ENST00000496423 EIF2AK4Q9P2K8 1649 aaKnown RBP18.85■□□□□ 0.61
ATG3-209ENST00000496423 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
ATG3-209ENST00000496423 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
ATG3-209ENST00000496423 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
ATG3-209ENST00000496423 CEP152O94986 1710 aa18.83■□□□□ 0.61
ATG3-209ENST00000496423 SHPRHQ149N8 1683 aa18.83■□□□□ 0.61
ATG3-209ENST00000496423 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
ATG3-209ENST00000496423 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
ATG3-209ENST00000496423 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
ATG3-209ENST00000496423 KDM5AP29375 1690 aaKnown RBP18.81■□□□□ 0.6
ATG3-209ENST00000496423 ARHGAP31Q2M1Z3 1444 aa18.81■□□□□ 0.6
ATG3-209ENST00000496423 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
ATG3-209ENST00000496423 AFF2P51816 1311 aa18.8■□□□□ 0.6
ATG3-209ENST00000496423 CADPS2Q86UW7 1296 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms