RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 KIF15Q9NS87 1388 aa28.19■■■□□ 2.1
COPS6-210ENST00000496358 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
COPS6-210ENST00000496358 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
COPS6-210ENST00000496358 PREX1Q8TCU6 1659 aa28.17■■■□□ 2.1
COPS6-210ENST00000496358 ANKRD30AQ9BXX3 1397 aa28.16■■■□□ 2.1
COPS6-210ENST00000496358 RNF17Q9BXT8 1623 aaKnown RBP28.13■■■□□ 2.09
COPS6-210ENST00000496358 WASHC2CQ9Y4E1 1318 aa28.12■■■□□ 2.09
COPS6-210ENST00000496358 KDM5DQ9BY66 1539 aa28.11■■■□□ 2.09
COPS6-210ENST00000496358 FAM135AQ9P2D6 1515 aa28.11■■■□□ 2.09
COPS6-210ENST00000496358 NCOA1Q15788 1441 aa28.1■■■□□ 2.09
COPS6-210ENST00000496358 ERBINQ96RT1 1412 aa28.09■■■□□ 2.09
COPS6-210ENST00000496358 UHRF1BP1Q6BDS2 1440 aa28.09■■■□□ 2.09
COPS6-210ENST00000496358 ADGRL2O95490 1459 aa28.08■■■□□ 2.09
COPS6-210ENST00000496358 HSPA2P54652 639 aa28.08■■■□□ 2.09
COPS6-210ENST00000496358 NPATQ14207 1427 aa28.08■■■□□ 2.09
COPS6-210ENST00000496358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.05■■■□□ 2.089e-7■■□□□ 13.7
COPS6-210ENST00000496358 PTPRKQ15262 1439 aa28.04■■■□□ 2.08
COPS6-210ENST00000496358 ITGAEP38570 1179 aa28.04■■■□□ 2.08
COPS6-210ENST00000496358 ZC3H13Q5T200 1668 aaKnown RBP28.03■■■□□ 2.08
COPS6-210ENST00000496358 MROH1Q8NDA8 1641 aa28.03■■■□□ 2.08
COPS6-210ENST00000496358 ABCC3O15438 1527 aa28■■■□□ 2.07
COPS6-210ENST00000496358 CEP152O94986 1710 aa28■■■□□ 2.07
COPS6-210ENST00000496358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.99■■■□□ 2.071e-6■■■□□ 15.9
COPS6-210ENST00000496358 RRBP1Q9P2E9 1410 aaKnown RBP27.99■■■□□ 2.07
COPS6-210ENST00000496358 PZPP20742 1482 aa27.97■■■□□ 2.07
COPS6-210ENST00000496358 DEPDC5O75140 1603 aa27.97■■■□□ 2.07
COPS6-210ENST00000496358 PRDM15P57071 1507 aaPredicted RBP27.97■■■□□ 2.07
COPS6-210ENST00000496358 FBXO31Q5XUX0 539 aaPredicted RBP27.96■■■□□ 2.07
COPS6-210ENST00000496358 ANKRD50Q9ULJ7 1429 aa27.95■■■□□ 2.07
COPS6-210ENST00000496358 ROCK1Q13464 1354 aa27.95■■■□□ 2.06
COPS6-210ENST00000496358 KANK1Q14678 1352 aa27.95■■■□□ 2.06
COPS6-210ENST00000496358 MYO3AQ8NEV4 1616 aa27.94■■■□□ 2.06
COPS6-210ENST00000496358 CAMSAP1Q5T5Y3 1602 aa27.93■■■□□ 2.06
COPS6-210ENST00000496358 CFAP65Q6ZU64 1925 aaKnown RBP27.92■■■□□ 2.06
COPS6-210ENST00000496358 TNRQ92752 1358 aa27.9■■■□□ 2.06
COPS6-210ENST00000496358 ZNF142P52746 1687 aaPredicted RBP27.89■■■□□ 2.06
COPS6-210ENST00000496358 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
COPS6-210ENST00000496358 STRCQ7RTU9 1775 aa27.85■■■□□ 2.05
COPS6-210ENST00000496358 SOCS7O14512 581 aa27.84■■■□□ 2.05
COPS6-210ENST00000496358 VWDEQ8N2E2 1590 aa27.84■■■□□ 2.05
COPS6-210ENST00000496358 A2ML1A8K2U0 1454 aa27.83■■■□□ 2.04
COPS6-210ENST00000496358 ARHGAP31Q2M1Z3 1444 aa27.82■■■□□ 2.04
COPS6-210ENST00000496358 ERVK-7P63135 1459 aa27.82■■■□□ 2.04
COPS6-210ENST00000496358 LMTK2Q8IWU2 1503 aa27.82■■■□□ 2.04
COPS6-210ENST00000496358 SPATA31D1Q6ZQQ2 1576 aa27.82■■■□□ 2.04
COPS6-210ENST00000496358 DISP3Q9P2K9 1392 aa27.81■■■□□ 2.04
COPS6-210ENST00000496358 CERKQ8TCT0 537 aa27.79■■■□□ 2.04
COPS6-210ENST00000496358 DMRT2Q9Y5R5 561 aa27.79■■■□□ 2.04
COPS6-210ENST00000496358 UNC13BO14795 1591 aa27.78■■■□□ 2.04
COPS6-210ENST00000496358 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
COPS6-210ENST00000496358 ILDR2Q71H61 639 aa27.75■■■□□ 2.03
COPS6-210ENST00000496358 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
COPS6-210ENST00000496358 PLA2R1Q13018 1463 aa27.72■■■□□ 2.03
COPS6-210ENST00000496358 TET3O43151 1660 aa27.72■■■□□ 2.03
COPS6-210ENST00000496358 UGGT1Q9NYU2 1555 aa27.71■■■□□ 2.03
COPS6-210ENST00000496358 NCKAP5LQ9HCH0 1330 aa27.7■■■□□ 2.03
COPS6-210ENST00000496358 THEMISQ8N1K5 641 aaPredicted RBP27.7■■■□□ 2.02
COPS6-210ENST00000496358 GCC2Q8IWJ2 1684 aa27.7■■■□□ 2.02
COPS6-210ENST00000496358 NUP155O75694 1391 aa27.69■■■□□ 2.02
COPS6-210ENST00000496358 NAIPQ13075 1403 aa27.68■■■□□ 2.02
COPS6-210ENST00000496358 IQGAP3Q86VI3 1631 aa27.68■■■□□ 2.02
COPS6-210ENST00000496358 PKD2Q13563 968 aa27.68■■■□□ 2.02
COPS6-210ENST00000496358 PTPRTO14522 1441 aa27.67■■■□□ 2.02
COPS6-210ENST00000496358 RPRD2Q5VT52 1461 aaKnown RBP27.64■■■□□ 2.02
COPS6-210ENST00000496358 HFM1A2PYH4 1435 aa27.64■■■□□ 2.02
COPS6-210ENST00000496358 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
COPS6-210ENST00000496358 UBR1Q8IWV7 1749 aa27.63■■■□□ 2.01
COPS6-210ENST00000496358 NOS1P29475 1434 aa27.62■■■□□ 2.01
COPS6-210ENST00000496358 SYNMO15061 1565 aa27.61■■■□□ 2.01
COPS6-210ENST00000496358 E9PCH4 1651 aa27.61■■■□□ 2.01
COPS6-210ENST00000496358 PIK3C2BO00750 1634 aa27.6■■■□□ 2.01
COPS6-210ENST00000496358 ANKLE2Q86XL3 938 aa27.6■■■□□ 2.01
COPS6-210ENST00000496358 IDI1Q13907 227 aa27.58■■■□□ 2.01
COPS6-210ENST00000496358 STAG3Q9UJ98 1225 aa27.58■■■□□ 2.01
COPS6-210ENST00000496358 SLC52A1Q9NWF4 448 aa27.56■■■□□ 2
COPS6-210ENST00000496358 TRIM52Q96A61 297 aa27.54■■■□□ 2
COPS6-210ENST00000496358 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
COPS6-210ENST00000496358 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
COPS6-210ENST00000496358 ADGRB3O60242 1522 aa27.47■■□□□ 1.99
COPS6-210ENST00000496358 SLIT1O75093 1534 aa27.47■■□□□ 1.99
COPS6-210ENST00000496358 NPHP4O75161 1426 aaPredicted RBP27.47■■□□□ 1.99
COPS6-210ENST00000496358 MED14O60244 1454 aa27.46■■□□□ 1.99
COPS6-210ENST00000496358 ARHGAP23Q9P227 1491 aa27.46■■□□□ 1.99
COPS6-210ENST00000496358 EID1Q9Y6B2 187 aa27.46■■□□□ 1.99
COPS6-210ENST00000496358 TXNDC2Q86VQ3 553 aa27.45■■□□□ 1.98
COPS6-210ENST00000496358 MYO5BQ9ULV0 1848 aa27.45■■□□□ 1.98
COPS6-210ENST00000496358 IQGAP1P46940 1657 aa27.45■■□□□ 1.98
COPS6-210ENST00000496358 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
COPS6-210ENST00000496358 SPHKAPQ2M3C7 1700 aa27.44■■□□□ 1.98
COPS6-210ENST00000496358 SCAF11Q99590 1463 aaKnown RBP27.44■■□□□ 1.98
COPS6-210ENST00000496358 LTKP29376 864 aa27.43■■□□□ 1.98
COPS6-210ENST00000496358 ZNF335Q9H4Z2 1342 aaPredicted RBP27.42■■□□□ 1.98
COPS6-210ENST00000496358 CHGAP10645 457 aaKnown RBP27.41■■□□□ 1.98
COPS6-210ENST00000496358 SLC4A1APQ9BWU0 796 aaKnown RBP27.41■■□□□ 1.98
COPS6-210ENST00000496358 LTBP4Q8N2S1 1624 aa27.41■■□□□ 1.98
COPS6-210ENST00000496358 TMEM131LA2VDJ0 1609 aa27.4■■□□□ 1.98
COPS6-210ENST00000496358 SETD5Q9C0A6 1442 aa27.39■■□□□ 1.97
COPS6-210ENST00000496358 ACIN1Q9UKV3 1341 aaKnown RBP27.34■■□□□ 1.97
COPS6-210ENST00000496358 HDGFP51858 240 aaKnown RBP27.33■■□□□ 1.97
COPS6-210ENST00000496358 RIMS2Q9UQ26 1411 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms