RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
NEPRO-224ENST00000496340 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
NEPRO-224ENST00000496340 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
NEPRO-224ENST00000496340 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
NEPRO-224ENST00000496340 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
NEPRO-224ENST00000496340 NPATQ14207 1427 aa16.9■□□□□ 0.3
NEPRO-224ENST00000496340 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
NEPRO-224ENST00000496340 RNF17Q9BXT8 1623 aaKnown RBP16.9■□□□□ 0.3
NEPRO-224ENST00000496340 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
NEPRO-224ENST00000496340 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
NEPRO-224ENST00000496340 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
NEPRO-224ENST00000496340 KDM5DQ9BY66 1539 aa16.88■□□□□ 0.29
NEPRO-224ENST00000496340 ABCC3O15438 1527 aa16.86■□□□□ 0.29
NEPRO-224ENST00000496340 EIF2AK4Q9P2K8 1649 aaKnown RBP16.86■□□□□ 0.29
NEPRO-224ENST00000496340 MYO3AQ8NEV4 1616 aa16.85■□□□□ 0.29
NEPRO-224ENST00000496340 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
NEPRO-224ENST00000496340 PZPP20742 1482 aa16.84■□□□□ 0.29
NEPRO-224ENST00000496340 CEP152O94986 1710 aa16.83■□□□□ 0.28
NEPRO-224ENST00000496340 ERBINQ96RT1 1412 aa16.83■□□□□ 0.28
NEPRO-224ENST00000496340 ANKRD30AQ9BXX3 1397 aa16.83■□□□□ 0.28
NEPRO-224ENST00000496340 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
NEPRO-224ENST00000496340 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
NEPRO-224ENST00000496340 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
NEPRO-224ENST00000496340 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
NEPRO-224ENST00000496340 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
NEPRO-224ENST00000496340 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
NEPRO-224ENST00000496340 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
NEPRO-224ENST00000496340 ZNF142P52746 1687 aaPredicted RBP16.8■□□□□ 0.28
NEPRO-224ENST00000496340 CEP170BQ9Y4F5 1589 aaPredicted RBP16.8■□□□□ 0.28
NEPRO-224ENST00000496340 TNRQ92752 1358 aa16.79■□□□□ 0.28
NEPRO-224ENST00000496340 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
NEPRO-224ENST00000496340 ITGAEP38570 1179 aa16.78■□□□□ 0.28
NEPRO-224ENST00000496340 VWDEQ8N2E2 1590 aa16.77■□□□□ 0.28
NEPRO-224ENST00000496340 A2ML1A8K2U0 1454 aa16.77■□□□□ 0.28
NEPRO-224ENST00000496340 ZC3H13Q5T200 1668 aaKnown RBP16.76■□□□□ 0.27
NEPRO-224ENST00000496340 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
NEPRO-224ENST00000496340 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
NEPRO-224ENST00000496340 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
NEPRO-224ENST00000496340 SPATA31D1Q6ZQQ2 1576 aa16.75■□□□□ 0.27
NEPRO-224ENST00000496340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
NEPRO-224ENST00000496340 PTPRTO14522 1441 aa16.72■□□□□ 0.27
NEPRO-224ENST00000496340 ARHGAP31Q2M1Z3 1444 aa16.72■□□□□ 0.27
NEPRO-224ENST00000496340 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
NEPRO-224ENST00000496340 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.27
NEPRO-224ENST00000496340 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
NEPRO-224ENST00000496340 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
NEPRO-224ENST00000496340 NEURL4Q96JN8 1562 aa16.68■□□□□ 0.26
NEPRO-224ENST00000496340 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
NEPRO-224ENST00000496340 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
NEPRO-224ENST00000496340 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
NEPRO-224ENST00000496340 CERKQ8TCT0 537 aa16.67■□□□□ 0.26
NEPRO-224ENST00000496340 SYNMO15061 1565 aa16.66■□□□□ 0.26
NEPRO-224ENST00000496340 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
NEPRO-224ENST00000496340 KANK1Q14678 1352 aa16.65■□□□□ 0.26
NEPRO-224ENST00000496340 UNC13BO14795 1591 aa16.65■□□□□ 0.26
NEPRO-224ENST00000496340 PKD2Q13563 968 aa16.65■□□□□ 0.26
NEPRO-224ENST00000496340 ZNF335Q9H4Z2 1342 aaPredicted RBP16.65■□□□□ 0.26
NEPRO-224ENST00000496340 NOS1P29475 1434 aa16.64■□□□□ 0.25
NEPRO-224ENST00000496340 IDI1Q13907 227 aa16.64■□□□□ 0.25
NEPRO-224ENST00000496340 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
NEPRO-224ENST00000496340 THEMISQ8N1K5 641 aaPredicted RBP16.63■□□□□ 0.25
NEPRO-224ENST00000496340 LTKP29376 864 aa16.62■□□□□ 0.25
NEPRO-224ENST00000496340 FBXO41Q8TF61 875 aa16.62■□□□□ 0.25
NEPRO-224ENST00000496340 PIK3C2BO00750 1634 aa16.62■□□□□ 0.25
NEPRO-224ENST00000496340 NAIPQ13075 1403 aa16.62■□□□□ 0.25
NEPRO-224ENST00000496340 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
NEPRO-224ENST00000496340 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
NEPRO-224ENST00000496340 E9PCH4 1651 aa16.59■□□□□ 0.25
NEPRO-224ENST00000496340 TET3O43151 1660 aa16.59■□□□□ 0.25
NEPRO-224ENST00000496340 NUP155O75694 1391 aa16.59■□□□□ 0.25
NEPRO-224ENST00000496340 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
NEPRO-224ENST00000496340 MED14O60244 1454 aa16.58■□□□□ 0.24
NEPRO-224ENST00000496340 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
NEPRO-224ENST00000496340 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
NEPRO-224ENST00000496340 NPHP4O75161 1426 aaPredicted RBP16.56■□□□□ 0.24
NEPRO-224ENST00000496340 SLIT1O75093 1534 aa16.55■□□□□ 0.24
NEPRO-224ENST00000496340 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
NEPRO-224ENST00000496340 TMEM2Q9UHN6 1383 aa16.53■□□□□ 0.24
NEPRO-224ENST00000496340 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
NEPRO-224ENST00000496340 STRCP1A6NGW2 1772 aa16.53■□□□□ 0.24
NEPRO-224ENST00000496340 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
NEPRO-224ENST00000496340 IQGAP1P46940 1657 aa16.53■□□□□ 0.24
NEPRO-224ENST00000496340 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.24
NEPRO-224ENST00000496340 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
NEPRO-224ENST00000496340 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
NEPRO-224ENST00000496340 ADGRB3O60242 1522 aa16.5■□□□□ 0.23
NEPRO-224ENST00000496340 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
NEPRO-224ENST00000496340 TMEM131LA2VDJ0 1609 aa16.49■□□□□ 0.23
NEPRO-224ENST00000496340 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
NEPRO-224ENST00000496340 STAG3Q9UJ98 1225 aa16.48■□□□□ 0.23
NEPRO-224ENST00000496340 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
NEPRO-224ENST00000496340 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
NEPRO-224ENST00000496340 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
NEPRO-224ENST00000496340 CHGAP10645 457 aaKnown RBP16.43■□□□□ 0.22
NEPRO-224ENST00000496340 FOXD1Q16676 465 aa16.43■□□□□ 0.22
NEPRO-224ENST00000496340 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
NEPRO-224ENST00000496340 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
NEPRO-224ENST00000496340 IQSEC2Q5JU85 1478 aa16.42■□□□□ 0.22
NEPRO-224ENST00000496340 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
NEPRO-224ENST00000496340 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms