RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
UBP1-213ENST00000496310 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
UBP1-213ENST00000496310 VWDEQ8N2E2 1590 aa11.67□□□□□ -0.54
UBP1-213ENST00000496310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.67□□□□□ -0.545e-10■■■■□ 19.8
UBP1-213ENST00000496310 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
UBP1-213ENST00000496310 CPS1P31327 1500 aa11.65□□□□□ -0.54
UBP1-213ENST00000496310 TNRQ92752 1358 aa11.65□□□□□ -0.55
UBP1-213ENST00000496310 FYCO1Q9BQS8 1478 aa11.64□□□□□ -0.55
UBP1-213ENST00000496310 KIAA1107Q9UPP5 1409 aa11.64□□□□□ -0.55
UBP1-213ENST00000496310 KIF3BO15066 747 aa11.64□□□□□ -0.55
UBP1-213ENST00000496310 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
UBP1-213ENST00000496310 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
UBP1-213ENST00000496310 ANKLE2Q86XL3 938 aa11.62□□□□□ -0.55
UBP1-213ENST00000496310 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
UBP1-213ENST00000496310 PLEKHH2Q8IVE3 1493 aa11.62□□□□□ -0.55
UBP1-213ENST00000496310 RGS17Q9UGC6 210 aaPredicted RBP11.61□□□□□ -0.55
UBP1-213ENST00000496310 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
UBP1-213ENST00000496310 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
UBP1-213ENST00000496310 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
UBP1-213ENST00000496310 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
UBP1-213ENST00000496310 PZPP20742 1482 aa11.59□□□□□ -0.55
UBP1-213ENST00000496310 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
UBP1-213ENST00000496310 DHX29Q7Z478 1369 aaKnown RBP11.59□□□□□ -0.55
UBP1-213ENST00000496310 LRRC7Q96NW7 1537 aa11.59□□□□□ -0.55
UBP1-213ENST00000496310 DEPDC5O75140 1603 aa11.58□□□□□ -0.56
UBP1-213ENST00000496310 THEMISQ8N1K5 641 aaPredicted RBP11.58□□□□□ -0.56
UBP1-213ENST00000496310 KDM5DQ9BY66 1539 aa11.58□□□□□ -0.56
UBP1-213ENST00000496310 CEP152O94986 1710 aa11.57□□□□□ -0.56
UBP1-213ENST00000496310 MIA2Q96PC5 1412 aa11.57□□□□□ -0.56
UBP1-213ENST00000496310 SETD1AO15047 1707 aaKnown RBP11.57□□□□□ -0.56
UBP1-213ENST00000496310 RNF17Q9BXT8 1623 aaKnown RBP11.57□□□□□ -0.56
UBP1-213ENST00000496310 ZC3H13Q5T200 1668 aaKnown RBP11.56□□□□□ -0.56
UBP1-213ENST00000496310 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
UBP1-213ENST00000496310 MED14O60244 1454 aa11.55□□□□□ -0.56
UBP1-213ENST00000496310 RTEL1-TNFRSF6BF6WH68 1400 aa11.54□□□□□ -0.56
UBP1-213ENST00000496310 UBR1Q8IWV7 1749 aa11.54□□□□□ -0.56
UBP1-213ENST00000496310 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
UBP1-213ENST00000496310 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
UBP1-213ENST00000496310 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
UBP1-213ENST00000496310 CCDC141Q6ZP82 1450 aa11.52□□□□□ -0.56
UBP1-213ENST00000496310 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
UBP1-213ENST00000496310 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
UBP1-213ENST00000496310 SYNMO15061 1565 aa11.52□□□□□ -0.57
UBP1-213ENST00000496310 LTKP29376 864 aa11.51□□□□□ -0.57
UBP1-213ENST00000496310 ABCC3O15438 1527 aa11.5□□□□□ -0.57
UBP1-213ENST00000496310 ERVK-7P63135 1459 aa11.49□□□□□ -0.57
UBP1-213ENST00000496310 TXNDC2Q86VQ3 553 aa11.48□□□□□ -0.57
UBP1-213ENST00000496310 CEP162Q5TB80 1403 aa11.48□□□□□ -0.57
UBP1-213ENST00000496310 NCOA2Q15596 1464 aa11.48□□□□□ -0.57
UBP1-213ENST00000496310 ROBO1Q9Y6N7 1651 aa11.47□□□□□ -0.57
UBP1-213ENST00000496310 MROH1Q8NDA8 1641 aa11.47□□□□□ -0.57
UBP1-213ENST00000496310 SCAF11Q99590 1463 aaKnown RBP11.46□□□□□ -0.57
UBP1-213ENST00000496310 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
UBP1-213ENST00000496310 TSPY4P0CV99 314 aa11.45□□□□□ -0.58
UBP1-213ENST00000496310 TSPY10P0CW01 314 aa11.45□□□□□ -0.58
UBP1-213ENST00000496310 PIK3C2BO00750 1634 aa11.45□□□□□ -0.58
UBP1-213ENST00000496310 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
UBP1-213ENST00000496310 MYO5BQ9ULV0 1848 aa11.43□□□□□ -0.58
UBP1-213ENST00000496310 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
UBP1-213ENST00000496310 SLC26A8Q96RN1 970 aa11.42□□□□□ -0.58
UBP1-213ENST00000496310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.42□□□□□ -0.585e-8■■■□□ 17
UBP1-213ENST00000496310 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
UBP1-213ENST00000496310 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
UBP1-213ENST00000496310 ARHGAP23Q9P227 1491 aa11.41□□□□□ -0.58
UBP1-213ENST00000496310 SLIT1O75093 1534 aa11.4□□□□□ -0.58
UBP1-213ENST00000496310 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
UBP1-213ENST00000496310 EID1Q9Y6B2 187 aa11.4□□□□□ -0.58
UBP1-213ENST00000496310 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
UBP1-213ENST00000496310 MAST1Q9Y2H9 1570 aa11.4□□□□□ -0.58
UBP1-213ENST00000496310 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
UBP1-213ENST00000496310 MAP3K1Q13233 1512 aa11.39□□□□□ -0.59
UBP1-213ENST00000496310 TRIM52Q96A61 297 aa11.38□□□□□ -0.59
UBP1-213ENST00000496310 BCANQ96GW7 911 aa11.37□□□□□ -0.59
UBP1-213ENST00000496310 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
UBP1-213ENST00000496310 TMEM2Q9UHN6 1383 aa11.37□□□□□ -0.59
UBP1-213ENST00000496310 KCNA6P17658 529 aa11.36□□□□□ -0.59
UBP1-213ENST00000496310 IDI1Q13907 227 aa11.36□□□□□ -0.59
UBP1-213ENST00000496310 FOXD1Q16676 465 aa11.36□□□□□ -0.59
UBP1-213ENST00000496310 KANK4Q5T7N3 995 aaPredicted RBP11.36□□□□□ -0.59
UBP1-213ENST00000496310 CHD2O14647 1828 aaKnown RBP11.36□□□□□ -0.59
UBP1-213ENST00000496310 DUOX2Q9NRD8 1548 aa11.35□□□□□ -0.59
UBP1-213ENST00000496310 CROCC2H7BZ55 1655 aa11.35□□□□□ -0.59
UBP1-213ENST00000496310 TET3O43151 1660 aa11.35□□□□□ -0.59
UBP1-213ENST00000496310 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
UBP1-213ENST00000496310 LRP6O75581 1613 aa11.34□□□□□ -0.59
UBP1-213ENST00000496310 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
UBP1-213ENST00000496310 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBP1-213ENST00000496310 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
UBP1-213ENST00000496310 COL16A1Q07092 1604 aaPredicted RBP11.33□□□□□ -0.6
UBP1-213ENST00000496310 PRDM15P57071 1507 aaPredicted RBP11.33□□□□□ -0.6
UBP1-213ENST00000496310 KIF15Q9NS87 1388 aa11.32□□□□□ -0.6
UBP1-213ENST00000496310 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
UBP1-213ENST00000496310 MSH6P52701 1360 aa11.31□□□□□ -0.6
UBP1-213ENST00000496310 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
UBP1-213ENST00000496310 ARHGAP31Q2M1Z3 1444 aa11.31□□□□□ -0.6
UBP1-213ENST00000496310 NWD1Q149M9 1564 aa11.31□□□□□ -0.6
UBP1-213ENST00000496310 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
UBP1-213ENST00000496310 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
UBP1-213ENST00000496310 JCADQ9P266 1359 aa11.3□□□□□ -0.6
UBP1-213ENST00000496310 ABCC5O15440 1437 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms