RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
VPS13B-206ENST00000496144 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
VPS13B-206ENST00000496144 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
VPS13B-206ENST00000496144 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
VPS13B-206ENST00000496144 PPRC1Q5VV67 1664 aaKnown RBP12.31□□□□□ -0.44
VPS13B-206ENST00000496144 DISP3Q9P2K9 1392 aa12.31□□□□□ -0.44
VPS13B-206ENST00000496144 MIA2Q96PC5 1412 aa12.3□□□□□ -0.44
VPS13B-206ENST00000496144 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
VPS13B-206ENST00000496144 NPATQ14207 1427 aa12.3□□□□□ -0.44
VPS13B-206ENST00000496144 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
VPS13B-206ENST00000496144 SETD5Q9C0A6 1442 aa12.3□□□□□ -0.44
VPS13B-206ENST00000496144 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 FER1L4A9Z1Z3 1794 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 CAMSAP2Q08AD1 1489 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 KIF15Q9NS87 1388 aa12.29□□□□□ -0.44
VPS13B-206ENST00000496144 ABCC1P33527 1531 aa12.28□□□□□ -0.44
VPS13B-206ENST00000496144 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
VPS13B-206ENST00000496144 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
VPS13B-206ENST00000496144 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.44
VPS13B-206ENST00000496144 ATF3P18847 181 aa12.27□□□□□ -0.44
VPS13B-206ENST00000496144 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
VPS13B-206ENST00000496144 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
VPS13B-206ENST00000496144 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
VPS13B-206ENST00000496144 AGLP35573 1532 aa12.24□□□□□ -0.45
VPS13B-206ENST00000496144 DIEXFQ68CQ4 756 aaKnown RBP12.24□□□□□ -0.45
VPS13B-206ENST00000496144 SLC52A1Q9NWF4 448 aa12.24□□□□□ -0.45
VPS13B-206ENST00000496144 SAMD9LQ8IVG5 1584 aa12.23□□□□□ -0.45
VPS13B-206ENST00000496144 PTPRTO14522 1441 aa12.23□□□□□ -0.45
VPS13B-206ENST00000496144 PTPRKQ15262 1439 aa12.22□□□□□ -0.45
VPS13B-206ENST00000496144 KDM5DQ9BY66 1539 aa12.2□□□□□ -0.46
VPS13B-206ENST00000496144 DUOX2Q9NRD8 1548 aa12.2□□□□□ -0.46
VPS13B-206ENST00000496144 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 NLRP1Q9C000 1473 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 ARHGEF12Q9NZN5 1544 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 PREX1Q8TCU6 1659 aa12.19□□□□□ -0.46
VPS13B-206ENST00000496144 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
VPS13B-206ENST00000496144 HFM1A2PYH4 1435 aa12.18□□□□□ -0.46
VPS13B-206ENST00000496144 FBXO31Q5XUX0 539 aaPredicted RBP12.18□□□□□ -0.46
VPS13B-206ENST00000496144 MSH6P52701 1360 aa12.18□□□□□ -0.46
VPS13B-206ENST00000496144 NUP155O75694 1391 aa12.17□□□□□ -0.46
VPS13B-206ENST00000496144 A2ML1A8K2U0 1454 aa12.17□□□□□ -0.46
VPS13B-206ENST00000496144 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
VPS13B-206ENST00000496144 ERBINQ96RT1 1412 aa12.17□□□□□ -0.46
VPS13B-206ENST00000496144 KDM5CP41229 1560 aa12.16□□□□□ -0.46
VPS13B-206ENST00000496144 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
VPS13B-206ENST00000496144 CROCC2H7BZ55 1655 aa12.16□□□□□ -0.46
VPS13B-206ENST00000496144 DNMT1P26358 1616 aaKnown RBP12.15□□□□□ -0.46
VPS13B-206ENST00000496144 REREQ9P2R6 1566 aa12.15□□□□□ -0.47
VPS13B-206ENST00000496144 FRMPD1Q5SYB0 1578 aa12.14□□□□□ -0.47
VPS13B-206ENST00000496144 CAMSAP1Q5T5Y3 1602 aa12.13□□□□□ -0.47
VPS13B-206ENST00000496144 DAPK1P53355 1430 aa12.12□□□□□ -0.47
VPS13B-206ENST00000496144 NAIPQ13075 1403 aa12.12□□□□□ -0.47
VPS13B-206ENST00000496144 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
VPS13B-206ENST00000496144 ARHGEF5Q12774 1597 aa12.12□□□□□ -0.47
VPS13B-206ENST00000496144 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
VPS13B-206ENST00000496144 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
VPS13B-206ENST00000496144 ABCA6Q8N139 1617 aa12.11□□□□□ -0.47
VPS13B-206ENST00000496144 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
VPS13B-206ENST00000496144 SETD1BQ9UPS6 1966 aaKnown RBP12.1□□□□□ -0.47
VPS13B-206ENST00000496144 PZPP20742 1482 aa12.1□□□□□ -0.47
VPS13B-206ENST00000496144 CLTCQ00610 1675 aaKnown RBP12.1□□□□□ -0.47
VPS13B-206ENST00000496144 CDC42BPAQ5VT25 1732 aa12.1□□□□□ -0.47
VPS13B-206ENST00000496144 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 A0A0G2JS52 829 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 MYT1Q01538 1121 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 PLA2R1Q13018 1463 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
VPS13B-206ENST00000496144 POGKQ9P215 609 aa12.08□□□□□ -0.48
VPS13B-206ENST00000496144 CADPS2Q86UW7 1296 aa12.08□□□□□ -0.48
VPS13B-206ENST00000496144 CPS1P31327 1500 aa12.07□□□□□ -0.48
VPS13B-206ENST00000496144 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
VPS13B-206ENST00000496144 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
VPS13B-206ENST00000496144 KCNA6P17658 529 aa12.05□□□□□ -0.48
VPS13B-206ENST00000496144 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
VPS13B-206ENST00000496144 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
VPS13B-206ENST00000496144 IQSEC2Q5JU85 1478 aa12.04□□□□□ -0.48
VPS13B-206ENST00000496144 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
VPS13B-206ENST00000496144 MROH2AA6NES4 1674 aa12.04□□□□□ -0.48
VPS13B-206ENST00000496144 ROCK1Q13464 1354 aa12.04□□□□□ -0.48
VPS13B-206ENST00000496144 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
VPS13B-206ENST00000496144 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
VPS13B-206ENST00000496144 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
VPS13B-206ENST00000496144 ABCC5O15440 1437 aa12.03□□□□□ -0.48
VPS13B-206ENST00000496144 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-206ENST00000496144 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-206ENST00000496144 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-206ENST00000496144 INO80Q9ULG1 1556 aaPredicted RBP12.02□□□□□ -0.48
VPS13B-206ENST00000496144 RGL3Q3MIN7 710 aa12.01□□□□□ -0.49
VPS13B-206ENST00000496144 KIDINS220Q9ULH0 1771 aa12.01□□□□□ -0.49
VPS13B-206ENST00000496144 ERVK-7P63135 1459 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 RIMS2Q9UQ26 1411 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 MIER1Q8N108 512 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 MBD5Q9P267 1494 aa12□□□□□ -0.49
VPS13B-206ENST00000496144 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms