RNA–Protein interactions for RNA: ENST00000495744.5

PLS1-210, Transcript of plastin 1, humanhuman

TSL 4

Gene PLS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-210ENST00000495744 TRIM52Q96A61 297 aa21.7■■□□□ 1.06
PLS1-210ENST00000495744 DEPDC5O75140 1603 aa21.69■■□□□ 1.06
PLS1-210ENST00000495744 KDM5DQ9BY66 1539 aa21.68■■□□□ 1.06
PLS1-210ENST00000495744 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
PLS1-210ENST00000495744 NUP155O75694 1391 aa21.66■■□□□ 1.06
PLS1-210ENST00000495744 KANK1Q14678 1352 aa21.64■■□□□ 1.06
PLS1-210ENST00000495744 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
PLS1-210ENST00000495744 PRDM15P57071 1507 aaPredicted RBP21.64■■□□□ 1.05
PLS1-210ENST00000495744 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
PLS1-210ENST00000495744 MROH1Q8NDA8 1641 aa21.62■■□□□ 1.05
PLS1-210ENST00000495744 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
PLS1-210ENST00000495744 VWDEQ8N2E2 1590 aa21.61■■□□□ 1.05
PLS1-210ENST00000495744 MPHOSPH9Q99550 1183 aa21.61■■□□□ 1.05
PLS1-210ENST00000495744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.05
PLS1-210ENST00000495744 GGT6Q6P531 493 aa21.6■■□□□ 1.05
PLS1-210ENST00000495744 SIGLEC1Q9BZZ2 1709 aa21.6■■□□□ 1.05
PLS1-210ENST00000495744 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
PLS1-210ENST00000495744 PZPP20742 1482 aa21.59■■□□□ 1.05
PLS1-210ENST00000495744 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
PLS1-210ENST00000495744 LMTK2Q8IWU2 1503 aa21.57■■□□□ 1.04
PLS1-210ENST00000495744 ARID4BQ4LE39 1312 aaPredicted RBP21.56■■□□□ 1.04
PLS1-210ENST00000495744 CLSPNQ9HAW4 1339 aa21.56■■□□□ 1.04
PLS1-210ENST00000495744 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
PLS1-210ENST00000495744 ZC3H13Q5T200 1668 aaKnown RBP21.55■■□□□ 1.04
PLS1-210ENST00000495744 WASHC2CQ9Y4E1 1318 aa21.54■■□□□ 1.04
PLS1-210ENST00000495744 TET3O43151 1660 aa21.53■■□□□ 1.04
PLS1-210ENST00000495744 ABCC3O15438 1527 aa21.51■■□□□ 1.03
PLS1-210ENST00000495744 PKD2Q13563 968 aa21.51■■□□□ 1.03
PLS1-210ENST00000495744 CEP152O94986 1710 aa21.49■■□□□ 1.03
PLS1-210ENST00000495744 MLECQ14165 292 aa21.48■■□□□ 1.03
PLS1-210ENST00000495744 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
PLS1-210ENST00000495744 ARHGAP31Q2M1Z3 1444 aa21.46■■□□□ 1.03
PLS1-210ENST00000495744 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
PLS1-210ENST00000495744 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
PLS1-210ENST00000495744 EFCAB6Q5THR3 1501 aa21.46■■□□□ 1.03
PLS1-210ENST00000495744 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
PLS1-210ENST00000495744 E9PCH4 1651 aa21.44■■□□□ 1.02
PLS1-210ENST00000495744 ANKRD30BQ9BXX2 1392 aa21.43■■□□□ 1.02
PLS1-210ENST00000495744 CLTCQ00610 1675 aaKnown RBP21.43■■□□□ 1.02
PLS1-210ENST00000495744 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
PLS1-210ENST00000495744 FOXD1Q16676 465 aa21.4■■□□□ 1.02
PLS1-210ENST00000495744 NPATQ14207 1427 aa21.39■■□□□ 1.02
PLS1-210ENST00000495744 FER1L4A9Z1Z3 1794 aa21.39■■□□□ 1.01
PLS1-210ENST00000495744 PTPRTO14522 1441 aa21.38■■□□□ 1.01
PLS1-210ENST00000495744 ADAMTSL3P82987 1691 aa21.38■■□□□ 1.01
PLS1-210ENST00000495744 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
PLS1-210ENST00000495744 SPHKAPQ2M3C7 1700 aa21.36■■□□□ 1.01
PLS1-210ENST00000495744 TRPM2O94759 1503 aa21.34■■□□□ 1.01
PLS1-210ENST00000495744 CFAP65Q6ZU64 1925 aaKnown RBP21.33■■□□□ 1.01
PLS1-210ENST00000495744 PLA2R1Q13018 1463 aa21.33■■□□□ 1.01
PLS1-210ENST00000495744 NOS1P29475 1434 aa21.33■■□□□ 1.01
PLS1-210ENST00000495744 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
PLS1-210ENST00000495744 MADDQ8WXG6 1647 aa21.31■■□□□ 1
PLS1-210ENST00000495744 CCDC144AA2RUR9 1427 aa21.3■■□□□ 1
PLS1-210ENST00000495744 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
PLS1-210ENST00000495744 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
PLS1-210ENST00000495744 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
PLS1-210ENST00000495744 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
PLS1-210ENST00000495744 ERVK-7P63135 1459 aa21.29■■□□□ 1
PLS1-210ENST00000495744 C3P01024 1663 aa21.28■■□□□ 1
PLS1-210ENST00000495744 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
PLS1-210ENST00000495744 SLC52A1Q9NWF4 448 aa21.27■■□□□ 1
PLS1-210ENST00000495744 NEUROD1Q13562 356 aa21.26■□□□□ 0.99
PLS1-210ENST00000495744 FBXO31Q5XUX0 539 aaPredicted RBP21.25■□□□□ 0.99
PLS1-210ENST00000495744 SYNMO15061 1565 aa21.24■□□□□ 0.99
PLS1-210ENST00000495744 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
PLS1-210ENST00000495744 CLTCL1P53675 1640 aa21.23■□□□□ 0.99
PLS1-210ENST00000495744 NEURL4Q96JN8 1562 aa21.23■□□□□ 0.99
PLS1-210ENST00000495744 KIF1BO60333 1816 aa21.21■□□□□ 0.99
PLS1-210ENST00000495744 CEBPAP49715 358 aaPredicted RBP21.2■□□□□ 0.98
PLS1-210ENST00000495744 TNRQ92752 1358 aa21.2■□□□□ 0.98
PLS1-210ENST00000495744 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
PLS1-210ENST00000495744 SETD1BQ9UPS6 1966 aaKnown RBP21.18■□□□□ 0.98
PLS1-210ENST00000495744 IDI1Q13907 227 aa21.18■□□□□ 0.98
PLS1-210ENST00000495744 PTPRMP28827 1452 aa21.18■□□□□ 0.98
PLS1-210ENST00000495744 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
PLS1-210ENST00000495744 SPATA31E1Q6ZUB1 1445 aa21.16■□□□□ 0.98
PLS1-210ENST00000495744 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
PLS1-210ENST00000495744 KDM4FA0A1W2PPD8 638 aa21.14■□□□□ 0.97
PLS1-210ENST00000495744 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
PLS1-210ENST00000495744 STAC3Q96MF2 364 aa21.13■□□□□ 0.97
PLS1-210ENST00000495744 L3MBTL2Q969R5 705 aa21.12■□□□□ 0.97
PLS1-210ENST00000495744 ADGRB3O60242 1522 aa21.12■□□□□ 0.97
PLS1-210ENST00000495744 TMEM131LA2VDJ0 1609 aa21.11■□□□□ 0.97
PLS1-210ENST00000495744 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
PLS1-210ENST00000495744 CHGAP10645 457 aaKnown RBP21.09■□□□□ 0.97
PLS1-210ENST00000495744 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
PLS1-210ENST00000495744 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
PLS1-210ENST00000495744 STAG3Q9UJ98 1225 aa21.09■□□□□ 0.97
PLS1-210ENST00000495744 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
PLS1-210ENST00000495744 MYO3AQ8NEV4 1616 aa21.06■□□□□ 0.96
PLS1-210ENST00000495744 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
PLS1-210ENST00000495744 DCAF11Q8TEB1 546 aa21.05■□□□□ 0.96
PLS1-210ENST00000495744 A2ML1A8K2U0 1454 aa21.05■□□□□ 0.96
PLS1-210ENST00000495744 UBR1Q8IWV7 1749 aa21.04■□□□□ 0.96
PLS1-210ENST00000495744 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
PLS1-210ENST00000495744 IFT172Q9UG01 1749 aa21.02■□□□□ 0.96
PLS1-210ENST00000495744 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.95
PLS1-210ENST00000495744 CEP170BQ9Y4F5 1589 aaPredicted RBP21.02■□□□□ 0.95
PLS1-210ENST00000495744 PPLO60437 1756 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms