RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
C2orf88-209ENST00000495546 GGT6Q6P531 493 aa23.43■■□□□ 1.34
C2orf88-209ENST00000495546 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
C2orf88-209ENST00000495546 CNTLNQ9NXG0 1405 aa23.42■■□□□ 1.34
C2orf88-209ENST00000495546 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
C2orf88-209ENST00000495546 PRDM15P57071 1507 aaPredicted RBP23.39■■□□□ 1.34
C2orf88-209ENST00000495546 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
C2orf88-209ENST00000495546 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
C2orf88-209ENST00000495546 NAIPQ13075 1403 aa23.37■■□□□ 1.33
C2orf88-209ENST00000495546 MROH2AA6NES4 1674 aa23.37■■□□□ 1.33
C2orf88-209ENST00000495546 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
C2orf88-209ENST00000495546 VWDEQ8N2E2 1590 aa23.34■■□□□ 1.33
C2orf88-209ENST00000495546 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
C2orf88-209ENST00000495546 ABCC3O15438 1527 aa23.33■■□□□ 1.33
C2orf88-209ENST00000495546 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
C2orf88-209ENST00000495546 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
C2orf88-209ENST00000495546 C3P01024 1663 aa23.32■■□□□ 1.32
C2orf88-209ENST00000495546 ZMYM3Q14202 1370 aa23.31■■□□□ 1.32
C2orf88-209ENST00000495546 UNC13BO14795 1591 aa23.31■■□□□ 1.32
C2orf88-209ENST00000495546 WASHC2CQ9Y4E1 1318 aa23.31■■□□□ 1.32
C2orf88-209ENST00000495546 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
C2orf88-209ENST00000495546 CEBPAP49715 358 aaPredicted RBP23.29■■□□□ 1.32
C2orf88-209ENST00000495546 LMTK2Q8IWU2 1503 aa23.28■■□□□ 1.32
C2orf88-209ENST00000495546 CEP152O94986 1710 aa23.26■■□□□ 1.31
C2orf88-209ENST00000495546 KANK1Q14678 1352 aa23.26■■□□□ 1.31
C2orf88-209ENST00000495546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.31
C2orf88-209ENST00000495546 PZPP20742 1482 aa23.24■■□□□ 1.31
C2orf88-209ENST00000495546 NPATQ14207 1427 aa23.24■■□□□ 1.31
C2orf88-209ENST00000495546 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
C2orf88-209ENST00000495546 ARHGAP31Q2M1Z3 1444 aa23.23■■□□□ 1.31
C2orf88-209ENST00000495546 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
C2orf88-209ENST00000495546 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
C2orf88-209ENST00000495546 EFCAB6Q5THR3 1501 aa23.18■■□□□ 1.3
C2orf88-209ENST00000495546 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
C2orf88-209ENST00000495546 NUP155O75694 1391 aa23.17■■□□□ 1.3
C2orf88-209ENST00000495546 TET3O43151 1660 aa23.16■■□□□ 1.3
C2orf88-209ENST00000495546 FBXO31Q5XUX0 539 aaPredicted RBP23.16■■□□□ 1.3
C2orf88-209ENST00000495546 SETD1BQ9UPS6 1966 aaKnown RBP23.16■■□□□ 1.3
C2orf88-209ENST00000495546 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
C2orf88-209ENST00000495546 ERVK-7P63135 1459 aa23.14■■□□□ 1.29
C2orf88-209ENST00000495546 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
C2orf88-209ENST00000495546 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
C2orf88-209ENST00000495546 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
C2orf88-209ENST00000495546 TNRQ92752 1358 aa23.1■■□□□ 1.29
C2orf88-209ENST00000495546 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
C2orf88-209ENST00000495546 UHRF1BP1Q6BDS2 1440 aa23.09■■□□□ 1.29
C2orf88-209ENST00000495546 NOS1P29475 1434 aa23.08■■□□□ 1.29
C2orf88-209ENST00000495546 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
C2orf88-209ENST00000495546 E9PCH4 1651 aa23.08■■□□□ 1.29
C2orf88-209ENST00000495546 TRIM26Q12899 539 aaPredicted RBP23.07■■□□□ 1.28
C2orf88-209ENST00000495546 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
C2orf88-209ENST00000495546 HRCP23327 699 aa23.05■■□□□ 1.28
C2orf88-209ENST00000495546 ZNF142P52746 1687 aaPredicted RBP23.05■■□□□ 1.28
C2orf88-209ENST00000495546 TRIM52Q96A61 297 aa23.04■■□□□ 1.28
C2orf88-209ENST00000495546 NLRP1Q9C000 1473 aa23.04■■□□□ 1.28
C2orf88-209ENST00000495546 SYNMO15061 1565 aa23.03■■□□□ 1.28
C2orf88-209ENST00000495546 CEP170BQ9Y4F5 1589 aaPredicted RBP23.03■■□□□ 1.28
C2orf88-209ENST00000495546 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
C2orf88-209ENST00000495546 CFAP65Q6ZU64 1925 aaKnown RBP23.02■■□□□ 1.28
C2orf88-209ENST00000495546 PTPRTO14522 1441 aa22.99■■□□□ 1.27
C2orf88-209ENST00000495546 SLC4A1APQ9BWU0 796 aaKnown RBP22.97■■□□□ 1.27
C2orf88-209ENST00000495546 HSPA2P54652 639 aa22.96■■□□□ 1.27
C2orf88-209ENST00000495546 PKD2Q13563 968 aa22.96■■□□□ 1.27
C2orf88-209ENST00000495546 PIK3C2BO00750 1634 aa22.95■■□□□ 1.26
C2orf88-209ENST00000495546 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
C2orf88-209ENST00000495546 SLC52A1Q9NWF4 448 aa22.94■■□□□ 1.26
C2orf88-209ENST00000495546 UGGT1Q9NYU2 1555 aa22.93■■□□□ 1.26
C2orf88-209ENST00000495546 PLA2R1Q13018 1463 aa22.93■■□□□ 1.26
C2orf88-209ENST00000495546 IDI1Q13907 227 aa22.93■■□□□ 1.26
C2orf88-209ENST00000495546 SPHKAPQ2M3C7 1700 aa22.93■■□□□ 1.26
C2orf88-209ENST00000495546 TRPM2O94759 1503 aa22.91■■□□□ 1.26
C2orf88-209ENST00000495546 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
C2orf88-209ENST00000495546 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
C2orf88-209ENST00000495546 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
C2orf88-209ENST00000495546 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
C2orf88-209ENST00000495546 FOXD1Q16676 465 aa22.85■■□□□ 1.25
C2orf88-209ENST00000495546 STRCQ7RTU9 1775 aa22.85■■□□□ 1.25
C2orf88-209ENST00000495546 CLTCL1P53675 1640 aa22.84■■□□□ 1.25
C2orf88-209ENST00000495546 ARHGAP23Q9P227 1491 aa22.84■■□□□ 1.25
C2orf88-209ENST00000495546 SLIT1O75093 1534 aa22.83■■□□□ 1.25
C2orf88-209ENST00000495546 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
C2orf88-209ENST00000495546 TMEM2Q9UHN6 1383 aa22.79■■□□□ 1.24
C2orf88-209ENST00000495546 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
C2orf88-209ENST00000495546 ANKRD30BQ9BXX2 1392 aa22.77■■□□□ 1.24
C2orf88-209ENST00000495546 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
C2orf88-209ENST00000495546 MYO5BQ9ULV0 1848 aa22.76■■□□□ 1.23
C2orf88-209ENST00000495546 NCKAP5LQ9HCH0 1330 aa22.76■■□□□ 1.23
C2orf88-209ENST00000495546 POLR1AO95602 1720 aaPredicted RBP22.75■■□□□ 1.23
C2orf88-209ENST00000495546 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
C2orf88-209ENST00000495546 ZFYVE9O95405 1425 aa22.74■■□□□ 1.23
C2orf88-209ENST00000495546 MED14O60244 1454 aa22.74■■□□□ 1.23
C2orf88-209ENST00000495546 ANKLE2Q86XL3 938 aa22.74■■□□□ 1.23
C2orf88-209ENST00000495546 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
C2orf88-209ENST00000495546 LTKP29376 864 aa22.73■■□□□ 1.23
C2orf88-209ENST00000495546 PCGF6Q9BYE7 350 aa22.73■■□□□ 1.23
C2orf88-209ENST00000495546 KIF1BO60333 1816 aa22.71■■□□□ 1.23
C2orf88-209ENST00000495546 CHGAP10645 457 aaKnown RBP22.71■■□□□ 1.23
C2orf88-209ENST00000495546 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
C2orf88-209ENST00000495546 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
C2orf88-209ENST00000495546 SPATA31E1Q6ZUB1 1445 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms