RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
PHF1-211ENST00000495509 UNC13BO14795 1591 aa23.08■■□□□ 1.29
PHF1-211ENST00000495509 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
PHF1-211ENST00000495509 FOXD1Q16676 465 aa23.07■■□□□ 1.28
PHF1-211ENST00000495509 ARHGEF40Q8TER5 1519 aa23.06■■□□□ 1.28
PHF1-211ENST00000495509 GGT6Q6P531 493 aa23.05■■□□□ 1.28
PHF1-211ENST00000495509 KDM5DQ9BY66 1539 aa23.04■■□□□ 1.28
PHF1-211ENST00000495509 SIGLEC1Q9BZZ2 1709 aa23.04■■□□□ 1.28
PHF1-211ENST00000495509 DEPDC5O75140 1603 aa23.03■■□□□ 1.28
PHF1-211ENST00000495509 PKD2Q13563 968 aa23.02■■□□□ 1.28
PHF1-211ENST00000495509 FAM135AQ9P2D6 1515 aa23.02■■□□□ 1.28
PHF1-211ENST00000495509 MROH1Q8NDA8 1641 aa23.02■■□□□ 1.28
PHF1-211ENST00000495509 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
PHF1-211ENST00000495509 REREQ9P2R6 1566 aa23■■□□□ 1.27
PHF1-211ENST00000495509 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
PHF1-211ENST00000495509 RNF17Q9BXT8 1623 aaKnown RBP22.99■■□□□ 1.27
PHF1-211ENST00000495509 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
PHF1-211ENST00000495509 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
PHF1-211ENST00000495509 PRDM15P57071 1507 aaPredicted RBP22.97■■□□□ 1.27
PHF1-211ENST00000495509 VWDEQ8N2E2 1590 aa22.96■■□□□ 1.27
PHF1-211ENST00000495509 KANK1Q14678 1352 aa22.96■■□□□ 1.27
PHF1-211ENST00000495509 AGLP35573 1532 aa22.95■■□□□ 1.26
PHF1-211ENST00000495509 MLECQ14165 292 aa22.94■■□□□ 1.26
PHF1-211ENST00000495509 ARID4BQ4LE39 1312 aaPredicted RBP22.93■■□□□ 1.26
PHF1-211ENST00000495509 NEUROD1Q13562 356 aa22.92■■□□□ 1.26
PHF1-211ENST00000495509 WASHC2CQ9Y4E1 1318 aa22.92■■□□□ 1.26
PHF1-211ENST00000495509 ANKRD30BQ9BXX2 1392 aa22.91■■□□□ 1.26
PHF1-211ENST00000495509 CEP152O94986 1710 aa22.91■■□□□ 1.26
PHF1-211ENST00000495509 TET3O43151 1660 aa22.87■■□□□ 1.25
PHF1-211ENST00000495509 ABCC3O15438 1527 aa22.87■■□□□ 1.25
PHF1-211ENST00000495509 E9PCH4 1651 aa22.87■■□□□ 1.25
PHF1-211ENST00000495509 LMTK2Q8IWU2 1503 aa22.85■■□□□ 1.25
PHF1-211ENST00000495509 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
PHF1-211ENST00000495509 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
PHF1-211ENST00000495509 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
PHF1-211ENST00000495509 PPP6R1Q9UPN7 881 aa22.82■■□□□ 1.24
PHF1-211ENST00000495509 EFCAB6Q5THR3 1501 aa22.82■■□□□ 1.24
PHF1-211ENST00000495509 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
PHF1-211ENST00000495509 NPATQ14207 1427 aa22.78■■□□□ 1.24
PHF1-211ENST00000495509 CLTCQ00610 1675 aaKnown RBP22.78■■□□□ 1.24
PHF1-211ENST00000495509 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
PHF1-211ENST00000495509 PTPRTO14522 1441 aa22.75■■□□□ 1.23
PHF1-211ENST00000495509 ESF1Q9H501 851 aaKnown RBP22.74■■□□□ 1.23
PHF1-211ENST00000495509 RPRD2Q5VT52 1461 aaKnown RBP22.74■■□□□ 1.23
PHF1-211ENST00000495509 SPHKAPQ2M3C7 1700 aa22.73■■□□□ 1.23
PHF1-211ENST00000495509 FBXO31Q5XUX0 539 aaPredicted RBP22.73■■□□□ 1.23
PHF1-211ENST00000495509 ARHGAP31Q2M1Z3 1444 aa22.73■■□□□ 1.23
PHF1-211ENST00000495509 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
PHF1-211ENST00000495509 ZMYM3Q14202 1370 aa22.7■■□□□ 1.22
PHF1-211ENST00000495509 TRPM2O94759 1503 aa22.69■■□□□ 1.22
PHF1-211ENST00000495509 TONSLQ96HA7 1378 aa22.69■■□□□ 1.22
PHF1-211ENST00000495509 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
PHF1-211ENST00000495509 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
PHF1-211ENST00000495509 TIMELESSQ9UNS1 1208 aa22.67■■□□□ 1.22
PHF1-211ENST00000495509 NOS1P29475 1434 aa22.67■■□□□ 1.22
PHF1-211ENST00000495509 CLTCL1P53675 1640 aa22.66■■□□□ 1.22
PHF1-211ENST00000495509 FER1L4A9Z1Z3 1794 aa22.65■■□□□ 1.22
PHF1-211ENST00000495509 PREX1Q8TCU6 1659 aa22.64■■□□□ 1.22
PHF1-211ENST00000495509 CEBPAP49715 358 aaPredicted RBP22.64■■□□□ 1.22
PHF1-211ENST00000495509 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.21
PHF1-211ENST00000495509 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
PHF1-211ENST00000495509 SYNMO15061 1565 aa22.63■■□□□ 1.21
PHF1-211ENST00000495509 ERVK-7P63135 1459 aa22.61■■□□□ 1.21
PHF1-211ENST00000495509 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
PHF1-211ENST00000495509 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
PHF1-211ENST00000495509 MADDQ8WXG6 1647 aa22.6■■□□□ 1.21
PHF1-211ENST00000495509 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
PHF1-211ENST00000495509 ADAMTSL3P82987 1691 aa22.59■■□□□ 1.21
PHF1-211ENST00000495509 IDI1Q13907 227 aa22.59■■□□□ 1.21
PHF1-211ENST00000495509 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
PHF1-211ENST00000495509 C3P01024 1663 aa22.57■■□□□ 1.2
PHF1-211ENST00000495509 CHGAP10645 457 aaKnown RBP22.56■■□□□ 1.2
PHF1-211ENST00000495509 SPATA31D1Q6ZQQ2 1576 aa22.56■■□□□ 1.2
PHF1-211ENST00000495509 RIMS1Q86UR5 1692 aaKnown RBP22.56■■□□□ 1.2
PHF1-211ENST00000495509 PIK3C2BO00750 1634 aa22.56■■□□□ 1.2
PHF1-211ENST00000495509 DCAF11Q8TEB1 546 aa22.55■■□□□ 1.2
PHF1-211ENST00000495509 SLC52A1Q9NWF4 448 aa22.55■■□□□ 1.2
PHF1-211ENST00000495509 KDM2AQ9Y2K7 1162 aa22.55■■□□□ 1.2
PHF1-211ENST00000495509 KIF1BO60333 1816 aa22.55■■□□□ 1.2
PHF1-211ENST00000495509 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
PHF1-211ENST00000495509 TNRQ92752 1358 aa22.5■■□□□ 1.19
PHF1-211ENST00000495509 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
PHF1-211ENST00000495509 ADGRB3O60242 1522 aa22.47■■□□□ 1.19
PHF1-211ENST00000495509 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
PHF1-211ENST00000495509 NEURL4Q96JN8 1562 aa22.45■■□□□ 1.18
PHF1-211ENST00000495509 TMEM131LA2VDJ0 1609 aa22.44■■□□□ 1.18
PHF1-211ENST00000495509 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
PHF1-211ENST00000495509 KDM4FA0A1W2PPD8 638 aa22.42■■□□□ 1.18
PHF1-211ENST00000495509 PTPRMP28827 1452 aa22.41■■□□□ 1.18
PHF1-211ENST00000495509 NUTM2DQ5VT03 806 aaPredicted RBP22.4■■□□□ 1.18
PHF1-211ENST00000495509 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.18
PHF1-211ENST00000495509 A2ML1A8K2U0 1454 aa22.39■■□□□ 1.17
PHF1-211ENST00000495509 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
PHF1-211ENST00000495509 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
PHF1-211ENST00000495509 ADGRF5Q8IZF2 1346 aa22.37■■□□□ 1.17
PHF1-211ENST00000495509 PRAG1Q86YV5 1406 aa22.37■■□□□ 1.17
PHF1-211ENST00000495509 PPLO60437 1756 aa22.37■■□□□ 1.17
PHF1-211ENST00000495509 NLRP1Q9C000 1473 aa22.37■■□□□ 1.17
PHF1-211ENST00000495509 SETD1BQ9UPS6 1966 aaKnown RBP22.36■■□□□ 1.17
PHF1-211ENST00000495509 NEXMIFQ5QGS0 1516 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms