RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 FAM135AQ9P2D6 1515 aa24.13■■□□□ 1.45
NUP58-214ENST00000495460 GGT6Q6P531 493 aa24.12■■□□□ 1.45
NUP58-214ENST00000495460 TCOF1Q13428 1488 aaKnown RBP24.11■■□□□ 1.45
NUP58-214ENST00000495460 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
NUP58-214ENST00000495460 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.45
NUP58-214ENST00000495460 MYO3AQ8NEV4 1616 aa24.08■■□□□ 1.45
NUP58-214ENST00000495460 RNF39Q9H2S5 420 aa24.06■■□□□ 1.44
NUP58-214ENST00000495460 A2ML1A8K2U0 1454 aa24.04■■□□□ 1.44
NUP58-214ENST00000495460 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
NUP58-214ENST00000495460 NCKAP5LQ9HCH0 1330 aa24.04■■□□□ 1.44
NUP58-214ENST00000495460 RNF216Q9NWF9 866 aaPredicted RBP24.03■■□□□ 1.44
NUP58-214ENST00000495460 NCOA2Q15596 1464 aa24.01■■□□□ 1.43
NUP58-214ENST00000495460 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
NUP58-214ENST00000495460 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
NUP58-214ENST00000495460 KIF3BO15066 747 aa23.98■■□□□ 1.43
NUP58-214ENST00000495460 DISP3Q9P2K9 1392 aa23.98■■□□□ 1.43
NUP58-214ENST00000495460 PZPP20742 1482 aa23.98■■□□□ 1.43
NUP58-214ENST00000495460 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
NUP58-214ENST00000495460 TSPY4P0CV99 314 aa23.97■■□□□ 1.43
NUP58-214ENST00000495460 TSPY10P0CW01 314 aa23.97■■□□□ 1.43
NUP58-214ENST00000495460 ZNF335Q9H4Z2 1342 aaPredicted RBP23.97■■□□□ 1.43
NUP58-214ENST00000495460 KDM5DQ9BY66 1539 aa23.96■■□□□ 1.43
NUP58-214ENST00000495460 WASHC2CQ9Y4E1 1318 aa23.95■■□□□ 1.42
NUP58-214ENST00000495460 TNRQ92752 1358 aa23.94■■□□□ 1.42
NUP58-214ENST00000495460 MAP3K1Q13233 1512 aa23.93■■□□□ 1.42
NUP58-214ENST00000495460 THEMISQ8N1K5 641 aaPredicted RBP23.92■■□□□ 1.42
NUP58-214ENST00000495460 NLRP1Q9C000 1473 aa23.92■■□□□ 1.42
NUP58-214ENST00000495460 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
NUP58-214ENST00000495460 SOCS7O14512 581 aa23.9■■□□□ 1.42
NUP58-214ENST00000495460 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
NUP58-214ENST00000495460 FBXO31Q5XUX0 539 aaPredicted RBP23.89■■□□□ 1.41
NUP58-214ENST00000495460 MAST1Q9Y2H9 1570 aa23.88■■□□□ 1.41
NUP58-214ENST00000495460 VPS8Q8N3P4 1428 aa23.88■■□□□ 1.41
NUP58-214ENST00000495460 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
NUP58-214ENST00000495460 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
NUP58-214ENST00000495460 CPS1P31327 1500 aa23.87■■□□□ 1.41
NUP58-214ENST00000495460 MED14O60244 1454 aa23.87■■□□□ 1.41
NUP58-214ENST00000495460 ILDR2Q71H61 639 aa23.86■■□□□ 1.41
NUP58-214ENST00000495460 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
NUP58-214ENST00000495460 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
NUP58-214ENST00000495460 SPATA31D1Q6ZQQ2 1576 aa23.84■■□□□ 1.41
NUP58-214ENST00000495460 NEURL4Q96JN8 1562 aa23.84■■□□□ 1.41
NUP58-214ENST00000495460 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
NUP58-214ENST00000495460 SHANK2Q9UPX8 1470 aa23.82■■□□□ 1.4
NUP58-214ENST00000495460 EIF2AK4Q9P2K8 1649 aaKnown RBP23.82■■□□□ 1.4
NUP58-214ENST00000495460 ZC3H13Q5T200 1668 aaKnown RBP23.82■■□□□ 1.4
NUP58-214ENST00000495460 UGGT1Q9NYU2 1555 aa23.81■■□□□ 1.4
NUP58-214ENST00000495460 MYOM3Q5VTT5 1437 aa23.79■■□□□ 1.4
NUP58-214ENST00000495460 TOM1O60784 492 aa23.79■■□□□ 1.4
NUP58-214ENST00000495460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.78■■□□□ 1.4
NUP58-214ENST00000495460 ABCC3O15438 1527 aa23.77■■□□□ 1.4
NUP58-214ENST00000495460 NPHP4O75161 1426 aaPredicted RBP23.74■■□□□ 1.39
NUP58-214ENST00000495460 VWDEQ8N2E2 1590 aa23.74■■□□□ 1.39
NUP58-214ENST00000495460 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
NUP58-214ENST00000495460 KANK4Q5T7N3 995 aaPredicted RBP23.72■■□□□ 1.39
NUP58-214ENST00000495460 ARHGAP31Q2M1Z3 1444 aa23.72■■□□□ 1.39
NUP58-214ENST00000495460 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
NUP58-214ENST00000495460 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.38
NUP58-214ENST00000495460 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
NUP58-214ENST00000495460 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
NUP58-214ENST00000495460 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
NUP58-214ENST00000495460 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
NUP58-214ENST00000495460 HSPA1LP34931 641 aa23.63■■□□□ 1.37
NUP58-214ENST00000495460 ARHGAP23Q9P227 1491 aa23.62■■□□□ 1.37
NUP58-214ENST00000495460 SLIT1O75093 1534 aa23.62■■□□□ 1.37
NUP58-214ENST00000495460 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
NUP58-214ENST00000495460 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
NUP58-214ENST00000495460 ABCC5O15440 1437 aa23.61■■□□□ 1.37
NUP58-214ENST00000495460 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
NUP58-214ENST00000495460 C1QBPQ07021 282 aaKnown RBP23.59■■□□□ 1.37
NUP58-214ENST00000495460 SYNMO15061 1565 aa23.59■■□□□ 1.37
NUP58-214ENST00000495460 LRRC7Q96NW7 1537 aa23.59■■□□□ 1.37
NUP58-214ENST00000495460 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
NUP58-214ENST00000495460 ALKQ9UM73 1620 aa23.58■■□□□ 1.36
NUP58-214ENST00000495460 CEP152O94986 1710 aa23.57■■□□□ 1.36
NUP58-214ENST00000495460 APLP2Q06481 763 aa23.57■■□□□ 1.36
NUP58-214ENST00000495460 CROCC2H7BZ55 1655 aa23.57■■□□□ 1.36
NUP58-214ENST00000495460 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
NUP58-214ENST00000495460 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
NUP58-214ENST00000495460 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 KANK1Q14678 1352 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 DAPK1P53355 1430 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 EID1Q9Y6B2 187 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 STRCP1A6NGW2 1772 aa23.54■■□□□ 1.36
NUP58-214ENST00000495460 LTKP29376 864 aa23.53■■□□□ 1.36
NUP58-214ENST00000495460 RRP7BPQ9NSQ0 103 aa23.53■■□□□ 1.36
NUP58-214ENST00000495460 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
NUP58-214ENST00000495460 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
NUP58-214ENST00000495460 ANKRD30AQ9BXX3 1397 aa23.52■■□□□ 1.36
NUP58-214ENST00000495460 MED1Q15648 1581 aaPredicted RBP23.51■■□□□ 1.35
NUP58-214ENST00000495460 TMEM2Q9UHN6 1383 aa23.51■■□□□ 1.35
NUP58-214ENST00000495460 SLC52A1Q9NWF4 448 aa23.46■■□□□ 1.35
NUP58-214ENST00000495460 IDI1Q13907 227 aa23.45■■□□□ 1.34
NUP58-214ENST00000495460 PIK3C2BO00750 1634 aa23.44■■□□□ 1.34
NUP58-214ENST00000495460 ADGRL2O95490 1459 aa23.43■■□□□ 1.34
NUP58-214ENST00000495460 NOS1P29475 1434 aa23.43■■□□□ 1.34
NUP58-214ENST00000495460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.342e-6■■□□□ 13.1
NUP58-214ENST00000495460 EFCAB6Q5THR3 1501 aa23.43■■□□□ 1.34
NUP58-214ENST00000495460 STAG3Q9UJ98 1225 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms