RNA–Protein interactions for RNA: ENST00000494855.5

UPK1B-204, Transcript of uroplakin 1B, humanhuman

TSL 5

Gene UPK1B, Length 670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-204ENST00000494855 SPAG9O60271 1321 aaKnown RBP13.31□□□□□ -0.28
UPK1B-204ENST00000494855 CCDC18Q5T9S5 1454 aa13.3□□□□□ -0.28
UPK1B-204ENST00000494855 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
UPK1B-204ENST00000494855 PZPP20742 1482 aa13.29□□□□□ -0.28
UPK1B-204ENST00000494855 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
UPK1B-204ENST00000494855 TNRQ92752 1358 aa13.29□□□□□ -0.28
UPK1B-204ENST00000494855 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
UPK1B-204ENST00000494855 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
UPK1B-204ENST00000494855 KDM5DQ9BY66 1539 aa13.28□□□□□ -0.28
UPK1B-204ENST00000494855 GPATCH8Q9UKJ3 1502 aaKnown RBP13.28□□□□□ -0.28
UPK1B-204ENST00000494855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.27□□□□□ -0.29
UPK1B-204ENST00000494855 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.29
UPK1B-204ENST00000494855 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
UPK1B-204ENST00000494855 UGGT1Q9NYU2 1555 aa13.26□□□□□ -0.29
UPK1B-204ENST00000494855 PLEKHH2Q8IVE3 1493 aa13.25□□□□□ -0.29
UPK1B-204ENST00000494855 GGT6Q6P531 493 aa13.25□□□□□ -0.29
UPK1B-204ENST00000494855 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
UPK1B-204ENST00000494855 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
UPK1B-204ENST00000494855 HNRNPMP52272 730 aaKnown RBP eCLIP13.22□□□□□ -0.29
UPK1B-204ENST00000494855 FBXO31Q5XUX0 539 aaPredicted RBP13.22□□□□□ -0.29
UPK1B-204ENST00000494855 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
UPK1B-204ENST00000494855 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
UPK1B-204ENST00000494855 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
UPK1B-204ENST00000494855 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
UPK1B-204ENST00000494855 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
UPK1B-204ENST00000494855 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
UPK1B-204ENST00000494855 UBR1Q8IWV7 1749 aa13.17□□□□□ -0.3
UPK1B-204ENST00000494855 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
UPK1B-204ENST00000494855 RTEL1-TNFRSF6BF6WH68 1400 aa13.16□□□□□ -0.3
UPK1B-204ENST00000494855 FAM135BQ49AJ0 1406 aa13.16□□□□□ -0.3
UPK1B-204ENST00000494855 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
UPK1B-204ENST00000494855 DHX29Q7Z478 1369 aaKnown RBP13.16□□□□□ -0.3
UPK1B-204ENST00000494855 SCAF11Q99590 1463 aaKnown RBP13.14□□□□□ -0.31
UPK1B-204ENST00000494855 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
UPK1B-204ENST00000494855 ABCC3O15438 1527 aa13.13□□□□□ -0.31
UPK1B-204ENST00000494855 ERVK-7P63135 1459 aa13.12□□□□□ -0.31
UPK1B-204ENST00000494855 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
UPK1B-204ENST00000494855 CFDP1Q9UEE9 299 aaPredicted RBP13.12□□□□□ -0.31
UPK1B-204ENST00000494855 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
UPK1B-204ENST00000494855 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
UPK1B-204ENST00000494855 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
UPK1B-204ENST00000494855 SLIT1O75093 1534 aa13.11□□□□□ -0.31
UPK1B-204ENST00000494855 EP400Q96L91 3159 aa13.11□□□□□ -0.31
UPK1B-204ENST00000494855 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
UPK1B-204ENST00000494855 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
UPK1B-204ENST00000494855 KIF3BO15066 747 aa13.09□□□□□ -0.31
UPK1B-204ENST00000494855 PHLPP1O60346 1717 aa13.09□□□□□ -0.31
UPK1B-204ENST00000494855 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
UPK1B-204ENST00000494855 CCDC141Q6ZP82 1450 aa13.09□□□□□ -0.31
UPK1B-204ENST00000494855 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
UPK1B-204ENST00000494855 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
UPK1B-204ENST00000494855 CEP152O94986 1710 aa13.08□□□□□ -0.32
UPK1B-204ENST00000494855 LRP6O75581 1613 aa13.07□□□□□ -0.32
UPK1B-204ENST00000494855 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
UPK1B-204ENST00000494855 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
UPK1B-204ENST00000494855 CAMSAP2Q08AD1 1489 aa13.07□□□□□ -0.32
UPK1B-204ENST00000494855 CFAP65Q6ZU64 1925 aaKnown RBP13.06□□□□□ -0.32
UPK1B-204ENST00000494855 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
UPK1B-204ENST00000494855 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
UPK1B-204ENST00000494855 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
UPK1B-204ENST00000494855 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
UPK1B-204ENST00000494855 LTKP29376 864 aa13.03□□□□□ -0.32
UPK1B-204ENST00000494855 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
UPK1B-204ENST00000494855 JCADQ9P266 1359 aa13.02□□□□□ -0.33
UPK1B-204ENST00000494855 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.33
UPK1B-204ENST00000494855 PRDM15P57071 1507 aaPredicted RBP13.02□□□□□ -0.33
UPK1B-204ENST00000494855 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
UPK1B-204ENST00000494855 MTUS2Q5JR59 1369 aa13.01□□□□□ -0.33
UPK1B-204ENST00000494855 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
UPK1B-204ENST00000494855 KDM5AP29375 1690 aaKnown RBP13□□□□□ -0.33
UPK1B-204ENST00000494855 CEP162Q5TB80 1403 aa13□□□□□ -0.33
UPK1B-204ENST00000494855 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
UPK1B-204ENST00000494855 TET3O43151 1660 aa12.99□□□□□ -0.33
UPK1B-204ENST00000494855 MAST1Q9Y2H9 1570 aa12.98□□□□□ -0.33
UPK1B-204ENST00000494855 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
UPK1B-204ENST00000494855 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.33
UPK1B-204ENST00000494855 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
UPK1B-204ENST00000494855 TMEM2Q9UHN6 1383 aa12.95□□□□□ -0.34
UPK1B-204ENST00000494855 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
UPK1B-204ENST00000494855 DIP2AQ14689 1571 aa12.94□□□□□ -0.34
UPK1B-204ENST00000494855 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
UPK1B-204ENST00000494855 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
UPK1B-204ENST00000494855 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
UPK1B-204ENST00000494855 MSH6P52701 1360 aa12.93□□□□□ -0.34
UPK1B-204ENST00000494855 SPATA31A6Q5VVP1 1343 aa12.92□□□□□ -0.34
UPK1B-204ENST00000494855 RGS12O14924 1447 aa12.92□□□□□ -0.34
UPK1B-204ENST00000494855 KCNA6P17658 529 aa12.92□□□□□ -0.34
UPK1B-204ENST00000494855 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
UPK1B-204ENST00000494855 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
UPK1B-204ENST00000494855 ADGRB3O60242 1522 aa12.9□□□□□ -0.34
UPK1B-204ENST00000494855 EID1Q9Y6B2 187 aa12.9□□□□□ -0.34
UPK1B-204ENST00000494855 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
UPK1B-204ENST00000494855 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
UPK1B-204ENST00000494855 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
UPK1B-204ENST00000494855 SETBP1Q9Y6X0 1596 aa12.87□□□□□ -0.35
UPK1B-204ENST00000494855 RXRBP28702 533 aa12.87□□□□□ -0.35
UPK1B-204ENST00000494855 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
UPK1B-204ENST00000494855 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
UPK1B-204ENST00000494855 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
UPK1B-204ENST00000494855 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms