RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 RAB3GAP2Q9H2M9 1393 aa21.12■□□□□ 0.97
CNNM3-205ENST00000494595 MROH1Q8NDA8 1641 aa21.11■□□□□ 0.97
CNNM3-205ENST00000494595 HRCP23327 699 aa21.11■□□□□ 0.97
CNNM3-205ENST00000494595 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
CNNM3-205ENST00000494595 PRDM15P57071 1507 aaPredicted RBP21.09■□□□□ 0.97
CNNM3-205ENST00000494595 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
CNNM3-205ENST00000494595 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.96
CNNM3-205ENST00000494595 UNC13BO14795 1591 aa21.07■□□□□ 0.96
CNNM3-205ENST00000494595 VWDEQ8N2E2 1590 aa21.07■□□□□ 0.96
CNNM3-205ENST00000494595 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
CNNM3-205ENST00000494595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.06■□□□□ 0.961e-8■□□□□ 9
CNNM3-205ENST00000494595 ADAMTSL3P82987 1691 aa21.05■□□□□ 0.96
CNNM3-205ENST00000494595 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
CNNM3-205ENST00000494595 KDM4FA0A1W2PPD8 638 aa21.05■□□□□ 0.96
CNNM3-205ENST00000494595 NUP155O75694 1391 aa21.05■□□□□ 0.96
CNNM3-205ENST00000494595 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
CNNM3-205ENST00000494595 KANK1Q14678 1352 aa21.03■□□□□ 0.96
CNNM3-205ENST00000494595 ABCC3O15438 1527 aa21.03■□□□□ 0.96
CNNM3-205ENST00000494595 CNTLNQ9NXG0 1405 aa21.03■□□□□ 0.96
CNNM3-205ENST00000494595 LMTK2Q8IWU2 1503 aa21.02■□□□□ 0.96
CNNM3-205ENST00000494595 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
CNNM3-205ENST00000494595 MADDQ8WXG6 1647 aa20.99■□□□□ 0.95
CNNM3-205ENST00000494595 PZPP20742 1482 aa20.99■□□□□ 0.95
CNNM3-205ENST00000494595 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
CNNM3-205ENST00000494595 ZMYM3Q14202 1370 aa20.97■□□□□ 0.95
CNNM3-205ENST00000494595 IQGAP3Q86VI3 1631 aa20.97■□□□□ 0.95
CNNM3-205ENST00000494595 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
CNNM3-205ENST00000494595 ZC3H13Q5T200 1668 aaKnown RBP20.95■□□□□ 0.94
CNNM3-205ENST00000494595 MPHOSPH9Q99550 1183 aa20.93■□□□□ 0.94
CNNM3-205ENST00000494595 NPATQ14207 1427 aa20.93■□□□□ 0.94
CNNM3-205ENST00000494595 PTPRMP28827 1452 aa20.93■□□□□ 0.94
CNNM3-205ENST00000494595 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
CNNM3-205ENST00000494595 CLTCQ00610 1675 aaKnown RBP20.92■□□□□ 0.94
CNNM3-205ENST00000494595 FER1L4A9Z1Z3 1794 aa20.92■□□□□ 0.94
CNNM3-205ENST00000494595 CEBPAP49715 358 aaPredicted RBP20.91■□□□□ 0.94
CNNM3-205ENST00000494595 EFCAB6Q5THR3 1501 aa20.91■□□□□ 0.94
CNNM3-205ENST00000494595 MROH2AA6NES4 1674 aa20.9■□□□□ 0.94
CNNM3-205ENST00000494595 CEP152O94986 1710 aa20.9■□□□□ 0.94
CNNM3-205ENST00000494595 TET3O43151 1660 aa20.89■□□□□ 0.94
CNNM3-205ENST00000494595 RIMS1Q86UR5 1692 aaKnown RBP20.89■□□□□ 0.94
CNNM3-205ENST00000494595 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.93
CNNM3-205ENST00000494595 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
CNNM3-205ENST00000494595 PKD2Q13563 968 aa20.88■□□□□ 0.93
CNNM3-205ENST00000494595 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
CNNM3-205ENST00000494595 NOS1P29475 1434 aa20.85■□□□□ 0.93
CNNM3-205ENST00000494595 ERVK-7P63135 1459 aa20.84■□□□□ 0.93
CNNM3-205ENST00000494595 PTPRTO14522 1441 aa20.83■□□□□ 0.93
CNNM3-205ENST00000494595 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.92
CNNM3-205ENST00000494595 C3P01024 1663 aa20.83■□□□□ 0.92
CNNM3-205ENST00000494595 SPATA31D1Q6ZQQ2 1576 aa20.82■□□□□ 0.92
CNNM3-205ENST00000494595 E9PCH4 1651 aa20.82■□□□□ 0.92
CNNM3-205ENST00000494595 FOXD1Q16676 465 aa20.81■□□□□ 0.92
CNNM3-205ENST00000494595 PLA2R1Q13018 1463 aa20.81■□□□□ 0.92
CNNM3-205ENST00000494595 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
CNNM3-205ENST00000494595 TNRQ92752 1358 aa20.79■□□□□ 0.92
CNNM3-205ENST00000494595 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.92
CNNM3-205ENST00000494595 PREX1Q8TCU6 1659 aa20.75■□□□□ 0.91
CNNM3-205ENST00000494595 SYNMO15061 1565 aa20.74■□□□□ 0.91
CNNM3-205ENST00000494595 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
CNNM3-205ENST00000494595 TRPM2O94759 1503 aa20.73■□□□□ 0.91
CNNM3-205ENST00000494595 IDI1Q13907 227 aa20.72■□□□□ 0.91
CNNM3-205ENST00000494595 NLRP1Q9C000 1473 aa20.71■□□□□ 0.91
CNNM3-205ENST00000494595 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
CNNM3-205ENST00000494595 PIK3C2BO00750 1634 aa20.67■□□□□ 0.9
CNNM3-205ENST00000494595 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
CNNM3-205ENST00000494595 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
CNNM3-205ENST00000494595 A2ML1A8K2U0 1454 aa20.66■□□□□ 0.9
CNNM3-205ENST00000494595 CCDC144AA2RUR9 1427 aa20.65■□□□□ 0.9
CNNM3-205ENST00000494595 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.9
CNNM3-205ENST00000494595 CLTCL1P53675 1640 aa20.64■□□□□ 0.89
CNNM3-205ENST00000494595 SETD1BQ9UPS6 1966 aaKnown RBP20.63■□□□□ 0.89
CNNM3-205ENST00000494595 CFAP65Q6ZU64 1925 aaKnown RBP20.62■□□□□ 0.89
CNNM3-205ENST00000494595 CEP170BQ9Y4F5 1589 aaPredicted RBP20.62■□□□□ 0.89
CNNM3-205ENST00000494595 LMTK3Q96Q04 1460 aa20.62■□□□□ 0.89
CNNM3-205ENST00000494595 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
CNNM3-205ENST00000494595 SPATA31E1Q6ZUB1 1445 aa20.6■□□□□ 0.89
CNNM3-205ENST00000494595 ADGRB3O60242 1522 aa20.58■□□□□ 0.89
CNNM3-205ENST00000494595 ZNF142P52746 1687 aaPredicted RBP20.58■□□□□ 0.89
CNNM3-205ENST00000494595 SIN3AQ96ST3 1273 aa20.58■□□□□ 0.89
CNNM3-205ENST00000494595 THEMISQ8N1K5 641 aaPredicted RBP20.57■□□□□ 0.88
CNNM3-205ENST00000494595 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
CNNM3-205ENST00000494595 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
CNNM3-205ENST00000494595 NEURL4Q96JN8 1562 aa20.56■□□□□ 0.88
CNNM3-205ENST00000494595 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
CNNM3-205ENST00000494595 STAG3Q9UJ98 1225 aa20.56■□□□□ 0.88
CNNM3-205ENST00000494595 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
CNNM3-205ENST00000494595 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
CNNM3-205ENST00000494595 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
CNNM3-205ENST00000494595 ARHGAP23Q9P227 1491 aa20.54■□□□□ 0.88
CNNM3-205ENST00000494595 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
CNNM3-205ENST00000494595 HSPA2P54652 639 aa20.52■□□□□ 0.88
CNNM3-205ENST00000494595 SLIT1O75093 1534 aa20.52■□□□□ 0.87
CNNM3-205ENST00000494595 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
CNNM3-205ENST00000494595 RPGRIP1LQ68CZ1 1315 aa20.51■□□□□ 0.87
CNNM3-205ENST00000494595 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
CNNM3-205ENST00000494595 RGL3Q3MIN7 710 aa20.49■□□□□ 0.87
CNNM3-205ENST00000494595 RIMS2Q9UQ26 1411 aa20.48■□□□□ 0.87
CNNM3-205ENST00000494595 LTKP29376 864 aa20.47■□□□□ 0.87
CNNM3-205ENST00000494595 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
CNNM3-205ENST00000494595 NEXMIFQ5QGS0 1516 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms