RNA–Protein interactions for RNA: ENST00000494535.1

SCARF2-201, Transcript of scavenger receptor class F member 2, humanhuman

TSL 2

Gene SCARF2, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF2-201ENST00000494535 PTPRTO14522 1441 aa32.08■■■□□ 2.73
SCARF2-201ENST00000494535 PTPN23Q9H3S7 1636 aa32.08■■■□□ 2.73
SCARF2-201ENST00000494535 KIF3BO15066 747 aa32.07■■■□□ 2.72
SCARF2-201ENST00000494535 NCOA1Q15788 1441 aa32.06■■■□□ 2.72
SCARF2-201ENST00000494535 EIF2AK4Q9P2K8 1649 aaKnown RBP32.05■■■□□ 2.72
SCARF2-201ENST00000494535 RNF17Q9BXT8 1623 aaKnown RBP32.04■■■□□ 2.72
SCARF2-201ENST00000494535 CEP170BQ9Y4F5 1589 aaPredicted RBP32.02■■■□□ 2.72
SCARF2-201ENST00000494535 CAMSAP1Q5T5Y3 1602 aa32.01■■■□□ 2.72
SCARF2-201ENST00000494535 CROCC2H7BZ55 1655 aa32.01■■■□□ 2.71
SCARF2-201ENST00000494535 SHANK2Q9UPX8 1470 aa32■■■□□ 2.71
SCARF2-201ENST00000494535 PZPP20742 1482 aa31.99■■■□□ 2.71
SCARF2-201ENST00000494535 PLA2R1Q13018 1463 aa31.98■■■□□ 2.71
SCARF2-201ENST00000494535 TCOF1Q13428 1488 aaKnown RBP31.98■■■□□ 2.71
SCARF2-201ENST00000494535 ZC3H13Q5T200 1668 aaKnown RBP31.97■■■□□ 2.71
SCARF2-201ENST00000494535 FAM50AQ14320 339 aaKnown RBP31.97■■■□□ 2.71
SCARF2-201ENST00000494535 CERKQ8TCT0 537 aa31.97■■■□□ 2.71
SCARF2-201ENST00000494535 WASHC2CQ9Y4E1 1318 aa31.95■■■□□ 2.7
SCARF2-201ENST00000494535 DUOX2Q9NRD8 1548 aa31.95■■■□□ 2.7
SCARF2-201ENST00000494535 A2ML1A8K2U0 1454 aa31.93■■■□□ 2.7
SCARF2-201ENST00000494535 DNMT1P26358 1616 aaKnown RBP31.93■■■□□ 2.7
SCARF2-201ENST00000494535 ABCC5O15440 1437 aa31.92■■■□□ 2.7
SCARF2-201ENST00000494535 RRBP1Q9P2E9 1410 aaKnown RBP31.92■■■□□ 2.7
SCARF2-201ENST00000494535 MROH1Q8NDA8 1641 aa31.89■■■□□ 2.7
SCARF2-201ENST00000494535 TNRQ92752 1358 aa31.88■■■□□ 2.69
SCARF2-201ENST00000494535 ABCC3O15438 1527 aa31.88■■■□□ 2.69
SCARF2-201ENST00000494535 DAPK1P53355 1430 aa31.87■■■□□ 2.69
SCARF2-201ENST00000494535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.87■■■□□ 2.69
SCARF2-201ENST00000494535 PKD2Q13563 968 aa31.87■■■□□ 2.69
SCARF2-201ENST00000494535 ERBINQ96RT1 1412 aa31.85■■■□□ 2.69
SCARF2-201ENST00000494535 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
SCARF2-201ENST00000494535 FBXO31Q5XUX0 539 aaPredicted RBP31.83■■■□□ 2.69
SCARF2-201ENST00000494535 NLRP1Q9C000 1473 aa31.83■■■□□ 2.69
SCARF2-201ENST00000494535 LTBP4Q8N2S1 1624 aa31.82■■■□□ 2.69
SCARF2-201ENST00000494535 PRDM15P57071 1507 aaPredicted RBP31.8■■■□□ 2.68
SCARF2-201ENST00000494535 SPATA31D1Q6ZQQ2 1576 aa31.79■■■□□ 2.68
SCARF2-201ENST00000494535 NCKAP5LQ9HCH0 1330 aa31.78■■■□□ 2.68
SCARF2-201ENST00000494535 CEP152O94986 1710 aa31.78■■■□□ 2.68
SCARF2-201ENST00000494535 DEPDC5O75140 1603 aa31.78■■■□□ 2.68
SCARF2-201ENST00000494535 IQSEC2Q5JU85 1478 aa31.78■■■□□ 2.68
SCARF2-201ENST00000494535 POLR1AO95602 1720 aaPredicted RBP31.77■■■□□ 2.68
SCARF2-201ENST00000494535 ANKRD30AQ9BXX3 1397 aa31.74■■■□□ 2.67
SCARF2-201ENST00000494535 RRP7BPQ9NSQ0 103 aa31.73■■■□□ 2.67
SCARF2-201ENST00000494535 ARHGAP31Q2M1Z3 1444 aa31.72■■■□□ 2.67
SCARF2-201ENST00000494535 ADGRL2O95490 1459 aa31.72■■■□□ 2.67
SCARF2-201ENST00000494535 ERVK-7P63135 1459 aa31.72■■■□□ 2.67
SCARF2-201ENST00000494535 ITGAEP38570 1179 aa31.71■■■□□ 2.67
SCARF2-201ENST00000494535 UGGT1Q9NYU2 1555 aa31.71■■■□□ 2.67
SCARF2-201ENST00000494535 THEMISQ8N1K5 641 aaPredicted RBP31.68■■■□□ 2.66
SCARF2-201ENST00000494535 NEURL4Q96JN8 1562 aa31.68■■■□□ 2.66
SCARF2-201ENST00000494535 CHIC2Q9UKJ5 165 aa31.65■■■□□ 2.66
SCARF2-201ENST00000494535 LMTK2Q8IWU2 1503 aa31.64■■■□□ 2.66
SCARF2-201ENST00000494535 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.65
SCARF2-201ENST00000494535 KANK1Q14678 1352 aa31.62■■■□□ 2.65
SCARF2-201ENST00000494535 CFAP65Q6ZU64 1925 aaKnown RBP31.62■■■□□ 2.65
SCARF2-201ENST00000494535 MED14O60244 1454 aa31.61■■■□□ 2.65
SCARF2-201ENST00000494535 ZNF335Q9H4Z2 1342 aaPredicted RBP31.6■■■□□ 2.65
SCARF2-201ENST00000494535 ANKLE2Q86XL3 938 aa31.6■■■□□ 2.65
SCARF2-201ENST00000494535 UBR1Q8IWV7 1749 aa31.58■■■□□ 2.65
SCARF2-201ENST00000494535 ROCK1Q13464 1354 aa31.55■■■□□ 2.64
SCARF2-201ENST00000494535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.52■■■□□ 2.64
SCARF2-201ENST00000494535 IQGAP1P46940 1657 aa31.51■■■□□ 2.64
SCARF2-201ENST00000494535 TRIM26Q12899 539 aaPredicted RBP31.51■■■□□ 2.63
SCARF2-201ENST00000494535 KDM5AP29375 1690 aaKnown RBP31.51■■■□□ 2.63
SCARF2-201ENST00000494535 NPHP4O75161 1426 aaPredicted RBP31.5■■■□□ 2.63
SCARF2-201ENST00000494535 ANKRD50Q9ULJ7 1429 aa31.5■■■□□ 2.63
SCARF2-201ENST00000494535 CPS1P31327 1500 aa31.49■■■□□ 2.63
SCARF2-201ENST00000494535 EFCAB6Q5THR3 1501 aa31.49■■■□□ 2.63
SCARF2-201ENST00000494535 SLIT1O75093 1534 aa31.47■■■□□ 2.63
SCARF2-201ENST00000494535 ARHGAP23Q9P227 1491 aa31.46■■■□□ 2.63
SCARF2-201ENST00000494535 PIK3C2BO00750 1634 aa31.44■■■□□ 2.62
SCARF2-201ENST00000494535 RPRD2Q5VT52 1461 aaKnown RBP31.42■■■□□ 2.62
SCARF2-201ENST00000494535 NOS1P29475 1434 aa31.41■■■□□ 2.62
SCARF2-201ENST00000494535 UNC13BO14795 1591 aa31.41■■■□□ 2.62
SCARF2-201ENST00000494535 SCAF11Q99590 1463 aaKnown RBP31.4■■■□□ 2.62
SCARF2-201ENST00000494535 SYNMO15061 1565 aa31.4■■■□□ 2.62
SCARF2-201ENST00000494535 GCC2Q8IWJ2 1684 aa31.4■■■□□ 2.62
SCARF2-201ENST00000494535 TET3O43151 1660 aa31.39■■■□□ 2.62
SCARF2-201ENST00000494535 HFM1A2PYH4 1435 aa31.37■■■□□ 2.61
SCARF2-201ENST00000494535 NAIPQ13075 1403 aa31.32■■■□□ 2.61
SCARF2-201ENST00000494535 TMEM2Q9UHN6 1383 aa31.32■■■□□ 2.6
SCARF2-201ENST00000494535 UBAP1LF5GYI3 381 aa31.31■■■□□ 2.6
SCARF2-201ENST00000494535 IDI1Q13907 227 aa31.31■■■□□ 2.6
SCARF2-201ENST00000494535 SLC52A1Q9NWF4 448 aa31.31■■■□□ 2.6
SCARF2-201ENST00000494535 LTKP29376 864 aa31.3■■■□□ 2.6
SCARF2-201ENST00000494535 EID1Q9Y6B2 187 aa31.3■■■□□ 2.6
SCARF2-201ENST00000494535 STRCP1A6NGW2 1772 aa31.3■■■□□ 2.6
SCARF2-201ENST00000494535 ADGRB3O60242 1522 aa31.29■■■□□ 2.6
SCARF2-201ENST00000494535 TXNDC2Q86VQ3 553 aa31.29■■■□□ 2.6
SCARF2-201ENST00000494535 IQGAP3Q86VI3 1631 aa31.28■■■□□ 2.6
SCARF2-201ENST00000494535 STAG3Q9UJ98 1225 aa31.26■■■□□ 2.59
SCARF2-201ENST00000494535 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
SCARF2-201ENST00000494535 E9PCH4 1651 aa31.22■■■□□ 2.59
SCARF2-201ENST00000494535 LRRC7Q96NW7 1537 aa31.21■■■□□ 2.59
SCARF2-201ENST00000494535 ACIN1Q9UKV3 1341 aaKnown RBP31.21■■■□□ 2.59
SCARF2-201ENST00000494535 TOM1O60784 492 aa31.2■■■□□ 2.59
SCARF2-201ENST00000494535 MYO5BQ9ULV0 1848 aa31.16■■■□□ 2.58
SCARF2-201ENST00000494535 TMEM131LA2VDJ0 1609 aa31.16■■■□□ 2.58
SCARF2-201ENST00000494535 ALKQ9UM73 1620 aa31.13■■■□□ 2.57
SCARF2-201ENST00000494535 NUP155O75694 1391 aa31.13■■■□□ 2.57
SCARF2-201ENST00000494535 PCGF6Q9BYE7 350 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms