RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 FAM135AQ9P2D6 1515 aa13.79□□□□□ -0.2
ABCA1-204ENST00000494467 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
ABCA1-204ENST00000494467 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
ABCA1-204ENST00000494467 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
ABCA1-204ENST00000494467 MROH1Q8NDA8 1641 aa13.78□□□□□ -0.2
ABCA1-204ENST00000494467 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
ABCA1-204ENST00000494467 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
ABCA1-204ENST00000494467 LMTK2Q8IWU2 1503 aa13.74□□□□□ -0.21
ABCA1-204ENST00000494467 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
ABCA1-204ENST00000494467 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
ABCA1-204ENST00000494467 PZPP20742 1482 aa13.73□□□□□ -0.21
ABCA1-204ENST00000494467 TET3O43151 1660 aa13.72□□□□□ -0.21
ABCA1-204ENST00000494467 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
ABCA1-204ENST00000494467 NUP155O75694 1391 aa13.67□□□□□ -0.22
ABCA1-204ENST00000494467 KIF3BO15066 747 aa13.66□□□□□ -0.22
ABCA1-204ENST00000494467 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
ABCA1-204ENST00000494467 E9PCH4 1651 aa13.66□□□□□ -0.22
ABCA1-204ENST00000494467 ABCC3O15438 1527 aa13.65□□□□□ -0.22
ABCA1-204ENST00000494467 CEP152O94986 1710 aa13.65□□□□□ -0.22
ABCA1-204ENST00000494467 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
ABCA1-204ENST00000494467 KANK1Q14678 1352 aa13.65□□□□□ -0.22
ABCA1-204ENST00000494467 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
ABCA1-204ENST00000494467 MROH2AA6NES4 1674 aa13.65□□□□□ -0.22
ABCA1-204ENST00000494467 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
ABCA1-204ENST00000494467 EFCAB6Q5THR3 1501 aa13.64□□□□□ -0.23
ABCA1-204ENST00000494467 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
ABCA1-204ENST00000494467 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
ABCA1-204ENST00000494467 ANKRD30BQ9BXX2 1392 aa13.61□□□□□ -0.23
ABCA1-204ENST00000494467 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
ABCA1-204ENST00000494467 PTPRTO14522 1441 aa13.61□□□□□ -0.23
ABCA1-204ENST00000494467 SPHKAPQ2M3C7 1700 aa13.61□□□□□ -0.23
ABCA1-204ENST00000494467 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
ABCA1-204ENST00000494467 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
ABCA1-204ENST00000494467 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
ABCA1-204ENST00000494467 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
ABCA1-204ENST00000494467 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
ABCA1-204ENST00000494467 PKD2Q13563 968 aa13.57□□□□□ -0.24
ABCA1-204ENST00000494467 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
ABCA1-204ENST00000494467 TRPM2O94759 1503 aa13.57□□□□□ -0.24
ABCA1-204ENST00000494467 FER1L4A9Z1Z3 1794 aa13.57□□□□□ -0.24
ABCA1-204ENST00000494467 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
ABCA1-204ENST00000494467 NOS1P29475 1434 aa13.56□□□□□ -0.24
ABCA1-204ENST00000494467 NPATQ14207 1427 aa13.56□□□□□ -0.24
ABCA1-204ENST00000494467 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
ABCA1-204ENST00000494467 GGT6Q6P531 493 aa13.55□□□□□ -0.24
ABCA1-204ENST00000494467 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
ABCA1-204ENST00000494467 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
ABCA1-204ENST00000494467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.243e-10■□□□□ 10.2
ABCA1-204ENST00000494467 WASHC2CQ9Y4E1 1318 aa13.54□□□□□ -0.24
ABCA1-204ENST00000494467 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
ABCA1-204ENST00000494467 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
ABCA1-204ENST00000494467 CFAP65Q6ZU64 1925 aaKnown RBP13.52□□□□□ -0.25
ABCA1-204ENST00000494467 C3P01024 1663 aa13.51□□□□□ -0.25
ABCA1-204ENST00000494467 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
ABCA1-204ENST00000494467 KIF1BO60333 1816 aa13.5□□□□□ -0.25
ABCA1-204ENST00000494467 SYNMO15061 1565 aa13.49□□□□□ -0.25
ABCA1-204ENST00000494467 ERVK-7P63135 1459 aa13.49□□□□□ -0.25
ABCA1-204ENST00000494467 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
ABCA1-204ENST00000494467 MADDQ8WXG6 1647 aa13.49□□□□□ -0.25
ABCA1-204ENST00000494467 SETD1BQ9UPS6 1966 aaKnown RBP13.49□□□□□ -0.25
ABCA1-204ENST00000494467 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
ABCA1-204ENST00000494467 ARID4BQ4LE39 1312 aaPredicted RBP13.47□□□□□ -0.25
ABCA1-204ENST00000494467 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
ABCA1-204ENST00000494467 FOXD1Q16676 465 aa13.46□□□□□ -0.25
ABCA1-204ENST00000494467 SPATA31E1Q6ZUB1 1445 aa13.46□□□□□ -0.26
ABCA1-204ENST00000494467 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
ABCA1-204ENST00000494467 IFT172Q9UG01 1749 aa13.44□□□□□ -0.26
ABCA1-204ENST00000494467 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
ABCA1-204ENST00000494467 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
ABCA1-204ENST00000494467 STAC3Q96MF2 364 aa13.43□□□□□ -0.26
ABCA1-204ENST00000494467 SIN3AQ96ST3 1273 aa13.43□□□□□ -0.26
ABCA1-204ENST00000494467 TMEM131LA2VDJ0 1609 aa13.42□□□□□ -0.26
ABCA1-204ENST00000494467 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
ABCA1-204ENST00000494467 MLECQ14165 292 aa13.41□□□□□ -0.26
ABCA1-204ENST00000494467 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
ABCA1-204ENST00000494467 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
ABCA1-204ENST00000494467 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
ABCA1-204ENST00000494467 PPLO60437 1756 aa13.4□□□□□ -0.26
ABCA1-204ENST00000494467 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
ABCA1-204ENST00000494467 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
ABCA1-204ENST00000494467 TNRQ92752 1358 aa13.38□□□□□ -0.27
ABCA1-204ENST00000494467 UBR1Q8IWV7 1749 aa13.38□□□□□ -0.27
ABCA1-204ENST00000494467 PTPRMP28827 1452 aa13.37□□□□□ -0.27
ABCA1-204ENST00000494467 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
ABCA1-204ENST00000494467 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
ABCA1-204ENST00000494467 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
ABCA1-204ENST00000494467 MYO3AQ8NEV4 1616 aa13.37□□□□□ -0.27
ABCA1-204ENST00000494467 RPGRIP1LQ68CZ1 1315 aa13.37□□□□□ -0.27
ABCA1-204ENST00000494467 MYOM2P54296 1465 aa13.36□□□□□ -0.27
ABCA1-204ENST00000494467 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
ABCA1-204ENST00000494467 IDI1Q13907 227 aa13.36□□□□□ -0.27
ABCA1-204ENST00000494467 ZFYVE9O95405 1425 aa13.36□□□□□ -0.27
ABCA1-204ENST00000494467 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
ABCA1-204ENST00000494467 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
ABCA1-204ENST00000494467 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
ABCA1-204ENST00000494467 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
ABCA1-204ENST00000494467 NRXN1Q9ULB1 1477 aa13.35□□□□□ -0.27
ABCA1-204ENST00000494467 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
ABCA1-204ENST00000494467 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
ABCA1-204ENST00000494467 SLIT1O75093 1534 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms