RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 ZMYM3Q14202 1370 aa29.46■■■□□ 2.31
PCMT1-209ENST00000494411 KIF15Q9NS87 1388 aa29.46■■■□□ 2.31
PCMT1-209ENST00000494411 KDM5DQ9BY66 1539 aa29.43■■■□□ 2.3
PCMT1-209ENST00000494411 FAM135AQ9P2D6 1515 aa29.42■■■□□ 2.3
PCMT1-209ENST00000494411 CHIC2Q9UKJ5 165 aa29.42■■■□□ 2.3
PCMT1-209ENST00000494411 RRP7BPQ9NSQ0 103 aa29.41■■■□□ 2.3
PCMT1-209ENST00000494411 UHRF1BP1Q6BDS2 1440 aa29.39■■■□□ 2.3
PCMT1-209ENST00000494411 HSPA2P54652 639 aa29.39■■■□□ 2.3
PCMT1-209ENST00000494411 ANKRD30AQ9BXX3 1397 aa29.39■■■□□ 2.29
PCMT1-209ENST00000494411 MROH1Q8NDA8 1641 aa29.38■■■□□ 2.29
PCMT1-209ENST00000494411 NPATQ14207 1427 aa29.38■■■□□ 2.29
PCMT1-209ENST00000494411 ERBINQ96RT1 1412 aa29.38■■■□□ 2.29
PCMT1-209ENST00000494411 ADGRL2O95490 1459 aa29.37■■■□□ 2.29
PCMT1-209ENST00000494411 NCOA1Q15788 1441 aa29.36■■■□□ 2.29
PCMT1-209ENST00000494411 WASHC2CQ9Y4E1 1318 aa29.35■■■□□ 2.29
PCMT1-209ENST00000494411 PTPRKQ15262 1439 aa29.35■■■□□ 2.29
PCMT1-209ENST00000494411 ZC3H13Q5T200 1668 aaKnown RBP29.34■■■□□ 2.29
PCMT1-209ENST00000494411 ABCC3O15438 1527 aa29.32■■■□□ 2.28
PCMT1-209ENST00000494411 CEP152O94986 1710 aa29.31■■■□□ 2.28
PCMT1-209ENST00000494411 MYO3AQ8NEV4 1616 aa29.31■■■□□ 2.28
PCMT1-209ENST00000494411 DEPDC5O75140 1603 aa29.3■■■□□ 2.28
PCMT1-209ENST00000494411 PRDM15P57071 1507 aaPredicted RBP29.3■■■□□ 2.28
PCMT1-209ENST00000494411 PZPP20742 1482 aa29.29■■■□□ 2.28
PCMT1-209ENST00000494411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.27■■■□□ 2.28
PCMT1-209ENST00000494411 ZNF142P52746 1687 aaPredicted RBP29.25■■■□□ 2.27
PCMT1-209ENST00000494411 CAMSAP1Q5T5Y3 1602 aa29.24■■■□□ 2.27
PCMT1-209ENST00000494411 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
PCMT1-209ENST00000494411 FBXO31Q5XUX0 539 aaPredicted RBP29.22■■■□□ 2.27
PCMT1-209ENST00000494411 ITGAEP38570 1179 aa29.21■■■□□ 2.27
PCMT1-209ENST00000494411 CEP170BQ9Y4F5 1589 aaPredicted RBP29.21■■■□□ 2.27
PCMT1-209ENST00000494411 ANKRD50Q9ULJ7 1429 aa29.2■■■□□ 2.26
PCMT1-209ENST00000494411 STRCQ7RTU9 1775 aa29.19■■■□□ 2.26
PCMT1-209ENST00000494411 ROCK1Q13464 1354 aa29.19■■■□□ 2.26
PCMT1-209ENST00000494411 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.19■■■□□ 2.26
PCMT1-209ENST00000494411 TNRQ92752 1358 aa29.18■■■□□ 2.26
PCMT1-209ENST00000494411 KANK1Q14678 1352 aa29.15■■■□□ 2.26
PCMT1-209ENST00000494411 VWDEQ8N2E2 1590 aa29.15■■■□□ 2.26
PCMT1-209ENST00000494411 CFAP65Q6ZU64 1925 aaKnown RBP29.15■■■□□ 2.26
PCMT1-209ENST00000494411 SPATA31D1Q6ZQQ2 1576 aa29.13■■■□□ 2.25
PCMT1-209ENST00000494411 A2ML1A8K2U0 1454 aa29.12■■■□□ 2.25
PCMT1-209ENST00000494411 ERVK-7P63135 1459 aa29.11■■■□□ 2.25
PCMT1-209ENST00000494411 LMTK2Q8IWU2 1503 aa29.1■■■□□ 2.25
PCMT1-209ENST00000494411 ARHGAP31Q2M1Z3 1444 aa29.09■■■□□ 2.25
PCMT1-209ENST00000494411 UNC13BO14795 1591 aa29.09■■■□□ 2.25
PCMT1-209ENST00000494411 NLRP1Q9C000 1473 aa29.06■■■□□ 2.24
PCMT1-209ENST00000494411 FBXO41Q8TF61 875 aa29.06■■■□□ 2.24
PCMT1-209ENST00000494411 EFCAB6Q5THR3 1501 aa29.04■■■□□ 2.24
PCMT1-209ENST00000494411 PLA2R1Q13018 1463 aa29.03■■■□□ 2.24
PCMT1-209ENST00000494411 TET3O43151 1660 aa28.99■■■□□ 2.23
PCMT1-209ENST00000494411 DMRT2Q9Y5R5 561 aa28.99■■■□□ 2.23
PCMT1-209ENST00000494411 UGGT1Q9NYU2 1555 aa28.99■■■□□ 2.23
PCMT1-209ENST00000494411 PTPRTO14522 1441 aa28.97■■■□□ 2.23
PCMT1-209ENST00000494411 GCC2Q8IWJ2 1684 aa28.97■■■□□ 2.23
PCMT1-209ENST00000494411 NCKAP5LQ9HCH0 1330 aa28.96■■■□□ 2.23
PCMT1-209ENST00000494411 IQGAP3Q86VI3 1631 aa28.96■■■□□ 2.23
PCMT1-209ENST00000494411 POLR1AO95602 1720 aaPredicted RBP28.94■■■□□ 2.22
PCMT1-209ENST00000494411 UBR1Q8IWV7 1749 aa28.93■■■□□ 2.22
PCMT1-209ENST00000494411 NAIPQ13075 1403 aa28.93■■■□□ 2.22
PCMT1-209ENST00000494411 SYNMO15061 1565 aa28.92■■■□□ 2.22
PCMT1-209ENST00000494411 RPRD2Q5VT52 1461 aaKnown RBP28.91■■■□□ 2.22
PCMT1-209ENST00000494411 PKD2Q13563 968 aa28.9■■■□□ 2.22
PCMT1-209ENST00000494411 PIK3C2BO00750 1634 aa28.9■■■□□ 2.22
PCMT1-209ENST00000494411 NOS1P29475 1434 aa28.89■■■□□ 2.22
PCMT1-209ENST00000494411 THEMISQ8N1K5 641 aaPredicted RBP28.89■■■□□ 2.22
PCMT1-209ENST00000494411 E9PCH4 1651 aa28.89■■■□□ 2.21
PCMT1-209ENST00000494411 NUP155O75694 1391 aa28.88■■■□□ 2.21
PCMT1-209ENST00000494411 NEURL4Q96JN8 1562 aa28.88■■■□□ 2.21
PCMT1-209ENST00000494411 HFM1A2PYH4 1435 aa28.86■■■□□ 2.21
PCMT1-209ENST00000494411 KDM5AP29375 1690 aaKnown RBP28.8■■■□□ 2.2
PCMT1-209ENST00000494411 ANKLE2Q86XL3 938 aa28.8■■■□□ 2.2
PCMT1-209ENST00000494411 IDI1Q13907 227 aa28.79■■■□□ 2.2
PCMT1-209ENST00000494411 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
PCMT1-209ENST00000494411 SLIT1O75093 1534 aa28.76■■■□□ 2.19
PCMT1-209ENST00000494411 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
PCMT1-209ENST00000494411 IQGAP1P46940 1657 aa28.75■■■□□ 2.19
PCMT1-209ENST00000494411 MED14O60244 1454 aa28.75■■■□□ 2.19
PCMT1-209ENST00000494411 ARHGAP23Q9P227 1491 aa28.75■■■□□ 2.19
PCMT1-209ENST00000494411 STAG3Q9UJ98 1225 aa28.75■■■□□ 2.19
PCMT1-209ENST00000494411 CERKQ8TCT0 537 aa28.74■■■□□ 2.19
PCMT1-209ENST00000494411 SLC52A1Q9NWF4 448 aa28.74■■■□□ 2.19
PCMT1-209ENST00000494411 NPHP4O75161 1426 aaPredicted RBP28.74■■■□□ 2.19
PCMT1-209ENST00000494411 MYO5BQ9ULV0 1848 aa28.72■■■□□ 2.19
PCMT1-209ENST00000494411 SCAF11Q99590 1463 aaKnown RBP28.72■■■□□ 2.19
PCMT1-209ENST00000494411 SPHKAPQ2M3C7 1700 aa28.71■■■□□ 2.19
PCMT1-209ENST00000494411 ZNF335Q9H4Z2 1342 aaPredicted RBP28.7■■■□□ 2.19
PCMT1-209ENST00000494411 TMEM2Q9UHN6 1383 aa28.7■■■□□ 2.18
PCMT1-209ENST00000494411 TRIM52Q96A61 297 aa28.67■■■□□ 2.18
PCMT1-209ENST00000494411 TMEM131LA2VDJ0 1609 aa28.67■■■□□ 2.18
PCMT1-209ENST00000494411 LTKP29376 864 aa28.66■■■□□ 2.18
PCMT1-209ENST00000494411 TXNDC2Q86VQ3 553 aa28.66■■■□□ 2.18
PCMT1-209ENST00000494411 EID1Q9Y6B2 187 aa28.63■■■□□ 2.17
PCMT1-209ENST00000494411 CHGAP10645 457 aaKnown RBP28.58■■■□□ 2.17
PCMT1-209ENST00000494411 TRPM2O94759 1503 aa28.58■■■□□ 2.17
PCMT1-209ENST00000494411 ZFYVE9O95405 1425 aa28.56■■■□□ 2.16
PCMT1-209ENST00000494411 SLC4A1APQ9BWU0 796 aaKnown RBP28.56■■■□□ 2.16
PCMT1-209ENST00000494411 SETD5Q9C0A6 1442 aa28.56■■■□□ 2.16
PCMT1-209ENST00000494411 CLTCL1P53675 1640 aa28.55■■■□□ 2.16
PCMT1-209ENST00000494411 IQSEC2Q5JU85 1478 aa28.54■■■□□ 2.16
PCMT1-209ENST00000494411 RIMS2Q9UQ26 1411 aa28.54■■■□□ 2.16
PCMT1-209ENST00000494411 CPS1P31327 1500 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms