RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
DEPDC5-220ENST00000494065 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
DEPDC5-220ENST00000494065 TRAPPC8Q9Y2L5 1435 aa12.89□□□□□ -0.35
DEPDC5-220ENST00000494065 AGLP35573 1532 aa12.89□□□□□ -0.35
DEPDC5-220ENST00000494065 GPATCH8Q9UKJ3 1502 aaKnown RBP12.89□□□□□ -0.35
DEPDC5-220ENST00000494065 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
DEPDC5-220ENST00000494065 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
DEPDC5-220ENST00000494065 TIAM1Q13009 1591 aa12.88□□□□□ -0.35
DEPDC5-220ENST00000494065 KIDINS220Q9ULH0 1771 aa12.88□□□□□ -0.35
DEPDC5-220ENST00000494065 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
DEPDC5-220ENST00000494065 AFAP1Q8N556 730 aa12.87□□□□□ -0.35
DEPDC5-220ENST00000494065 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
DEPDC5-220ENST00000494065 PREX1Q8TCU6 1659 aa12.86□□□□□ -0.35
DEPDC5-220ENST00000494065 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
DEPDC5-220ENST00000494065 MLECQ14165 292 aa12.86□□□□□ -0.35
DEPDC5-220ENST00000494065 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
DEPDC5-220ENST00000494065 ATP7AQ04656 1500 aa12.85□□□□□ -0.35
DEPDC5-220ENST00000494065 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
DEPDC5-220ENST00000494065 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
DEPDC5-220ENST00000494065 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
DEPDC5-220ENST00000494065 PLXNC1O60486 1568 aa12.82□□□□□ -0.36
DEPDC5-220ENST00000494065 CFDP1Q9UEE9 299 aaPredicted RBP12.82□□□□□ -0.36
DEPDC5-220ENST00000494065 ZNF777Q9ULD5 760 aaPredicted RBP12.82□□□□□ -0.36
DEPDC5-220ENST00000494065 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
DEPDC5-220ENST00000494065 MROH2AA6NES4 1674 aa12.81□□□□□ -0.36
DEPDC5-220ENST00000494065 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
DEPDC5-220ENST00000494065 SPAG9O60271 1321 aaKnown RBP12.81□□□□□ -0.36
DEPDC5-220ENST00000494065 C3P01024 1663 aa12.8□□□□□ -0.36
DEPDC5-220ENST00000494065 ADGBQ8N7X0 1667 aa12.8□□□□□ -0.36
DEPDC5-220ENST00000494065 UHRF1BP1Q6BDS2 1440 aa12.79□□□□□ -0.36
DEPDC5-220ENST00000494065 NCOA2Q15596 1464 aa12.79□□□□□ -0.36
DEPDC5-220ENST00000494065 ESF1Q9H501 851 aaKnown RBP12.78□□□□□ -0.36
DEPDC5-220ENST00000494065 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
DEPDC5-220ENST00000494065 A2MP01023 1474 aa12.78□□□□□ -0.36
DEPDC5-220ENST00000494065 CAMSAP2Q08AD1 1489 aa12.77□□□□□ -0.37
DEPDC5-220ENST00000494065 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.37
DEPDC5-220ENST00000494065 MAP3K1Q13233 1512 aa12.77□□□□□ -0.37
DEPDC5-220ENST00000494065 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
DEPDC5-220ENST00000494065 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
DEPDC5-220ENST00000494065 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
DEPDC5-220ENST00000494065 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
DEPDC5-220ENST00000494065 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
DEPDC5-220ENST00000494065 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
DEPDC5-220ENST00000494065 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
DEPDC5-220ENST00000494065 FAM135AQ9P2D6 1515 aa12.74□□□□□ -0.37
DEPDC5-220ENST00000494065 LRRC9Q6ZRR7 1453 aa12.74□□□□□ -0.37
DEPDC5-220ENST00000494065 NPATQ14207 1427 aa12.74□□□□□ -0.37
DEPDC5-220ENST00000494065 HSPA2P54652 639 aa12.73□□□□□ -0.37
DEPDC5-220ENST00000494065 SPOCK2Q92563 424 aa12.73□□□□□ -0.37
DEPDC5-220ENST00000494065 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
DEPDC5-220ENST00000494065 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
DEPDC5-220ENST00000494065 ZNF142P52746 1687 aaPredicted RBP12.7□□□□□ -0.38
DEPDC5-220ENST00000494065 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
DEPDC5-220ENST00000494065 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
DEPDC5-220ENST00000494065 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
DEPDC5-220ENST00000494065 RSPH4AQ5TD94 716 aa12.68□□□□□ -0.38
DEPDC5-220ENST00000494065 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
DEPDC5-220ENST00000494065 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 STRCQ7RTU9 1775 aa12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 NUBP1P53384 320 aa12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 MYOM3Q5VTT5 1437 aa12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
DEPDC5-220ENST00000494065 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
DEPDC5-220ENST00000494065 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
DEPDC5-220ENST00000494065 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
DEPDC5-220ENST00000494065 PTPRTO14522 1441 aa12.65□□□□□ -0.38
DEPDC5-220ENST00000494065 NCOA1Q15788 1441 aa12.65□□□□□ -0.38
DEPDC5-220ENST00000494065 POTEHQ6S545 545 aa12.65□□□□□ -0.38
DEPDC5-220ENST00000494065 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
DEPDC5-220ENST00000494065 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
DEPDC5-220ENST00000494065 RNF17Q9BXT8 1623 aaKnown RBP12.64□□□□□ -0.39
DEPDC5-220ENST00000494065 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
DEPDC5-220ENST00000494065 GGT6Q6P531 493 aa12.63□□□□□ -0.39
DEPDC5-220ENST00000494065 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
DEPDC5-220ENST00000494065 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
DEPDC5-220ENST00000494065 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
DEPDC5-220ENST00000494065 CAMSAP1Q5T5Y3 1602 aa12.62□□□□□ -0.39
DEPDC5-220ENST00000494065 PZPP20742 1482 aa12.61□□□□□ -0.39
DEPDC5-220ENST00000494065 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
DEPDC5-220ENST00000494065 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
DEPDC5-220ENST00000494065 PTPN23Q9H3S7 1636 aa12.6□□□□□ -0.39
DEPDC5-220ENST00000494065 A2ML1A8K2U0 1454 aa12.59□□□□□ -0.39
DEPDC5-220ENST00000494065 KIF3BO15066 747 aa12.59□□□□□ -0.39
DEPDC5-220ENST00000494065 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
DEPDC5-220ENST00000494065 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
DEPDC5-220ENST00000494065 KANK4Q5T7N3 995 aaPredicted RBP12.58□□□□□ -0.4
DEPDC5-220ENST00000494065 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
DEPDC5-220ENST00000494065 TNRQ92752 1358 aa12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 ABCC3O15438 1527 aa12.57□□□□□ -0.4
DEPDC5-220ENST00000494065 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
DEPDC5-220ENST00000494065 C19orf67A6NJJ6 358 aa12.56□□□□□ -0.4
DEPDC5-220ENST00000494065 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
DEPDC5-220ENST00000494065 MROH1Q8NDA8 1641 aa12.55□□□□□ -0.4
DEPDC5-220ENST00000494065 ERBINQ96RT1 1412 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms