RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 ZC3H13Q5T200 1668 aaKnown RBP15.42■□□□□ 0.06
RFC2-211ENST00000494019 MROH1Q8NDA8 1641 aa15.42■□□□□ 0.06
RFC2-211ENST00000494019 RRP7BPQ9NSQ0 103 aa15.41■□□□□ 0.06
RFC2-211ENST00000494019 PTPRMP28827 1452 aa15.4■□□□□ 0.06
RFC2-211ENST00000494019 ROCK1Q13464 1354 aa15.39■□□□□ 0.05
RFC2-211ENST00000494019 PRDM15P57071 1507 aaPredicted RBP15.39■□□□□ 0.05
RFC2-211ENST00000494019 KIF3BO15066 747 aa15.39■□□□□ 0.05
RFC2-211ENST00000494019 KDM5DQ9BY66 1539 aa15.38■□□□□ 0.05
RFC2-211ENST00000494019 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
RFC2-211ENST00000494019 AEBP2Q6ZN18 517 aaPredicted RBP15.38■□□□□ 0.05
RFC2-211ENST00000494019 GGT6Q6P531 493 aa15.37■□□□□ 0.05
RFC2-211ENST00000494019 CAMSAP1Q5T5Y3 1602 aa15.36■□□□□ 0.05
RFC2-211ENST00000494019 CNTLNQ9NXG0 1405 aa15.36■□□□□ 0.05
RFC2-211ENST00000494019 UNC13BO14795 1591 aa15.36■□□□□ 0.05
RFC2-211ENST00000494019 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
RFC2-211ENST00000494019 ESF1Q9H501 851 aaKnown RBP15.35■□□□□ 0.05
RFC2-211ENST00000494019 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
RFC2-211ENST00000494019 ABCC3O15438 1527 aa15.33■□□□□ 0.04
RFC2-211ENST00000494019 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
RFC2-211ENST00000494019 CFAP65Q6ZU64 1925 aaKnown RBP15.32■□□□□ 0.04
RFC2-211ENST00000494019 VWDEQ8N2E2 1590 aa15.3■□□□□ 0.04
RFC2-211ENST00000494019 IQGAP3Q86VI3 1631 aa15.29■□□□□ 0.04
RFC2-211ENST00000494019 HFM1A2PYH4 1435 aa15.29■□□□□ 0.04
RFC2-211ENST00000494019 NAIPQ13075 1403 aa15.29■□□□□ 0.04
RFC2-211ENST00000494019 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
RFC2-211ENST00000494019 TET3O43151 1660 aa15.28■□□□□ 0.04
RFC2-211ENST00000494019 WASHC2CQ9Y4E1 1318 aa15.28■□□□□ 0.04
RFC2-211ENST00000494019 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
RFC2-211ENST00000494019 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
RFC2-211ENST00000494019 KANK1Q14678 1352 aa15.27■□□□□ 0.04
RFC2-211ENST00000494019 CEBPAP49715 358 aaPredicted RBP15.27■□□□□ 0.04
RFC2-211ENST00000494019 PZPP20742 1482 aa15.27■□□□□ 0.03
RFC2-211ENST00000494019 ZMYM3Q14202 1370 aa15.26■□□□□ 0.03
RFC2-211ENST00000494019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
RFC2-211ENST00000494019 EFCAB6Q5THR3 1501 aa15.26■□□□□ 0.03
RFC2-211ENST00000494019 LMTK2Q8IWU2 1503 aa15.25■□□□□ 0.03
RFC2-211ENST00000494019 ZNF142P52746 1687 aaPredicted RBP15.25■□□□□ 0.03
RFC2-211ENST00000494019 E9PCH4 1651 aa15.23■□□□□ 0.03
RFC2-211ENST00000494019 NPATQ14207 1427 aa15.23■□□□□ 0.03
RFC2-211ENST00000494019 SPATA31D1Q6ZQQ2 1576 aa15.22■□□□□ 0.03
RFC2-211ENST00000494019 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
RFC2-211ENST00000494019 ERVK-7P63135 1459 aa15.2■□□□□ 0.02
RFC2-211ENST00000494019 ARHGAP31Q2M1Z3 1444 aa15.19■□□□□ 0.02
RFC2-211ENST00000494019 UHRF1BP1Q6BDS2 1440 aa15.19■□□□□ 0.02
RFC2-211ENST00000494019 CEP170BQ9Y4F5 1589 aaPredicted RBP15.19■□□□□ 0.02
RFC2-211ENST00000494019 SPHKAPQ2M3C7 1700 aa15.18■□□□□ 0.02
RFC2-211ENST00000494019 NUP155O75694 1391 aa15.18■□□□□ 0.02
RFC2-211ENST00000494019 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
RFC2-211ENST00000494019 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
RFC2-211ENST00000494019 SYNMO15061 1565 aa15.15■□□□□ 0.02
RFC2-211ENST00000494019 TNRQ92752 1358 aa15.15■□□□□ 0.02
RFC2-211ENST00000494019 FBXO31Q5XUX0 539 aaPredicted RBP15.15■□□□□ 0.02
RFC2-211ENST00000494019 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
RFC2-211ENST00000494019 MYO5BQ9ULV0 1848 aa15.13■□□□□ 0.01
RFC2-211ENST00000494019 UBR1Q8IWV7 1749 aa15.13■□□□□ 0.01
RFC2-211ENST00000494019 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
RFC2-211ENST00000494019 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
RFC2-211ENST00000494019 A2ML1A8K2U0 1454 aa15.12■□□□□ 0.01
RFC2-211ENST00000494019 NLRP1Q9C000 1473 aa15.12■□□□□ 0.01
RFC2-211ENST00000494019 POLR1AO95602 1720 aaPredicted RBP15.12■□□□□ 0.01
RFC2-211ENST00000494019 NOS1P29475 1434 aa15.1■□□□□ 0.01
RFC2-211ENST00000494019 KDM5AP29375 1690 aaKnown RBP15.1■□□□□ 0.01
RFC2-211ENST00000494019 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
RFC2-211ENST00000494019 STRCQ7RTU9 1775 aa15.09■□□□□ 0.01
RFC2-211ENST00000494019 HSPA2P54652 639 aa15.08■□□□□ 0
RFC2-211ENST00000494019 KIF1BO60333 1816 aa15.07■□□□□ 0
RFC2-211ENST00000494019 ADGRB3O60242 1522 aa15.07■□□□□ 0
RFC2-211ENST00000494019 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
RFC2-211ENST00000494019 TRPM2O94759 1503 aa15.06■□□□□ 0
RFC2-211ENST00000494019 CLTCL1P53675 1640 aa15.06■□□□□ 0
RFC2-211ENST00000494019 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
RFC2-211ENST00000494019 ACIN1Q9UKV3 1341 aaKnown RBP15.04■□□□□ -0
RFC2-211ENST00000494019 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
RFC2-211ENST00000494019 PLA2R1Q13018 1463 aa15.03■□□□□ -0
RFC2-211ENST00000494019 PKD2Q13563 968 aa15.02■□□□□ -0
RFC2-211ENST00000494019 PTPRTO14522 1441 aa15.01□□□□□ -0.01
RFC2-211ENST00000494019 NEURL4Q96JN8 1562 aa14.99□□□□□ -0.01
RFC2-211ENST00000494019 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
RFC2-211ENST00000494019 SLIT1O75093 1534 aa14.98□□□□□ -0.01
RFC2-211ENST00000494019 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
RFC2-211ENST00000494019 IDI1Q13907 227 aa14.98□□□□□ -0.01
RFC2-211ENST00000494019 SLC52A1Q9NWF4 448 aa14.98□□□□□ -0.01
RFC2-211ENST00000494019 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
RFC2-211ENST00000494019 HRCP23327 699 aa14.97□□□□□ -0.01
RFC2-211ENST00000494019 FOXD1Q16676 465 aa14.97□□□□□ -0.01
RFC2-211ENST00000494019 ARHGAP23Q9P227 1491 aa14.96□□□□□ -0.01
RFC2-211ENST00000494019 THEMISQ8N1K5 641 aaPredicted RBP14.96□□□□□ -0.01
RFC2-211ENST00000494019 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
RFC2-211ENST00000494019 SCAF11Q99590 1463 aaKnown RBP14.94□□□□□ -0.02
RFC2-211ENST00000494019 PPLO60437 1756 aa14.93□□□□□ -0.02
RFC2-211ENST00000494019 CCDC144AA2RUR9 1427 aa14.93□□□□□ -0.02
RFC2-211ENST00000494019 TMEM2Q9UHN6 1383 aa14.93□□□□□ -0.02
RFC2-211ENST00000494019 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
RFC2-211ENST00000494019 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
RFC2-211ENST00000494019 MED14O60244 1454 aa14.9□□□□□ -0.02
RFC2-211ENST00000494019 ANKLE2Q86XL3 938 aa14.9□□□□□ -0.02
RFC2-211ENST00000494019 NPHP4O75161 1426 aaPredicted RBP14.9□□□□□ -0.02
RFC2-211ENST00000494019 ZFYVE9O95405 1425 aa14.9□□□□□ -0.02
RFC2-211ENST00000494019 NEXMIFQ5QGS0 1516 aa14.89□□□□□ -0.03
RFC2-211ENST00000494019 RIMS2Q9UQ26 1411 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms